A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: NA0837  PDB ID: 3PMN 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16BB_DA8DC9:DG3DT4_CC-0.864-0.5533.35-4.0531.97632.561-1.3280.813.3923.5037.18632.864
11BB_DC1DG2:DC3DG4_DD1.0420.2992.923.0583.09733.4660.058-1.3443.0155.35-5.28233.74
17BB_DC9DT10:DA2DG3_CC-0.187-0.3983.1863.3952.2133.257-1.0430.8663.123.843-5.90433.495
12BB_DG2DG3:DC2DC3_DD-0.646-0.0963.355-2.5981.21934.545-0.3550.6733.3882.0494.36534.66
13BB_DG3DC4:DG1DC2_DD0.511-1.0143.201-1.1635.7635.561-2.418-0.9842.9889.3521.88836.028
14BB_DT6DT7:DA5DG6_CC0.366-0.7083.0633.1064.86224.006-3.0260.0192.88811.479-7.33324.68
15BB_DT7DA8:DT4DA5_CC-0.44-0.8013.243-2.7797.03830.678-2.740.3073.01713.0565.15531.576
18BB_DT10DG11:DC1DA2_CC0.380.4822.994-3.16113.07332.413-1.051-1.0792.91922.2625.38335.023

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.