A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 1-Dec-2021 number of released structures: 11785
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NDB ID: NA0884  PDB ID: 3PO3 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14NN_DA5DA6:DT12DT13_TT-0.8382.0323.028-10.959-6.64143.6133.1720.1982.827-8.71714.38545.369
15NN_DA6DG7:DC11DT12_TT0.2390.5423.912-7.8164.68445.0510.209-1.1173.8566.0410.07945.916
11NN_DG2DG3:DC15DC16_TT-1.889-0.1843.107-14.713-2.37237.9330.0150.9873.576-3.48921.64140.655
12NN_DG3DT4:DA14DC15_TT-0.086-0.2273.27712.5-12.99529.8451.6422.0892.878-22.801-21.93434.762
16NN_DG7DC8:DG10DC11_TT0.6460.3583.049-4.007-5.49840.8471.046-1.3072.906-7.8125.69341.386
13NN_DT4DA5:DT13DA14_TT0.4681.1694.50912.42724.4229.814-2.5921.5044.20338.732-19.7140.281
17PP_C7C9:DG19DG21_TT-0.648-2.2025.9330.1213.22458.355-3.3690.6615.36513.375-0.12259.706
18PP_C9C10:DG18DG19_TT0.147-1.9684.446-13.0883.25428.98-4.363-3.4173.7936.10324.54731.903

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.