A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA0904  PDB ID: 3Q0F 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14B_DA4:DT7_C0.83-0.1650.8454.948-9.47-8.754
16B_DA7:DT4_C-0.181-0.425-0.12-15.564.228-5.331
11B_DC1:DG10_C-0.384-0.231.057-30.085-2.958-4.122
13B_DG3:DC8_C-1.778-0.7030.533-2.489-5.672-18.923
15B_DG5:DC6_C0.163-0.1250.6398.083-10.459-2.231
17B_DG8:DC3_C-0.881-0.045-0.336-7.713.7277.515
12B_DT2:DA9_C-1.823-0.3331.165-21.554-5.691-6.585
18B_DT9:DA2_C-0.197-0.227-0.35912.2436.394-5.032

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.