A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: NA0904  PDB ID: 3Q0F 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14BB_DA4DG5:DC6DT7_CC1.21-0.3263.0145.7941.07325.132-1.017-1.1553.1912.424-13.08725.803
15BB_DA7DG8:DC3DT4_CC1.084-0.1183.1591.3479.67229.298-2.047-1.7843.01418.486-2.57430.848
11BB_DC1DT2:DA9DG10_CC-0.797-0.4633.079-0.991-7.68432.3270.4281.2343.126-13.5591.7533.218
13BB_DG3DA4:DT7DC8_CC-0.3151.3513.353-5.349-8.92753.6422.0130.023.125-9.7885.86554.568
16BB_DG8DT9:DA2DC3_CC-0.238-0.3932.912.5111.83131.045-1.0390.8652.8553.41-4.67731.196
12BB_DT2DG3:DC8DA9_CC-0.1561.0932.9137.069-3.62532.9652.3831.2552.691-6.275-12.23633.883

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.