3Q0F: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: NA0904 PDB ID: 3Q0F

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	BB_DA4DG5:DC6DT7_CC	1.21	-0.326	3.014	5.794	1.073	25.132	-1.017	-1.155	3.191	2.424	-13.087	25.803
1	5	BB_DA7DG8:DC3DT4_CC	1.084	-0.118	3.159	1.347	9.672	29.298	-2.047	-1.784	3.014	18.486	-2.574	30.848
1	1	BB_DC1DT2:DA9DG10_CC	-0.797	-0.463	3.079	-0.991	-7.684	32.327	0.428	1.234	3.126	-13.559	1.75	33.218
1	3	BB_DG3DA4:DT7DC8_CC	-0.315	1.351	3.353	-5.349	-8.927	53.642	2.013	0.02	3.125	-9.788	5.865	54.568
1	6	BB_DG8DT9:DA2DC3_CC	-0.238	-0.393	2.91	2.511	1.831	31.045	-1.039	0.865	2.855	3.41	-4.677	31.196
1	2	BB_DT2DG3:DC8DA9_CC	-0.156	1.093	2.913	7.069	-3.625	32.965	2.383	1.255	2.691	-6.275	-12.236	33.883

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.