A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: NA1734  PDB ID: 3VRS 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
112A_A6:U38_A0.1161.3780.357-8.234-2.093164.368
13A_C4:G15_A0.405-0.2050.5220.755-9.723-0.71
114A_C25:G36_A0.089-0.053-0.12511.149-8.8826.868
115A_C26:G35_A0.781-0.1970.0128.042-12.297.87
116A_C27:G34_A-0.313-0.073-0.062.201-12.8172.467
17A_C44:G11_A0.02-0.065-0.2219.4461.5441.106
18A_C45:G10_A0.3430.2721.19-15.35411.50410.134
110A_C47:G8_A0.396-0.1080.532-4.387-3.46.361
11A_G2:C17_A0.045-0.20.79112.785-1.271-2.614
12A_G3:C16_A-0.674-0.1210.2863.065-14.8972.779
14A_G5:C14_A-0.198-0.0460.17-3.1913.2293.709
113A_G24:C37_A-0.235-0.0140.319.918-0.6576.283
118A_G29:A32_A6.92-5.0380.89211.9548.026-13.535
15A_G42:C13_A-0.3740.025-0.271-5.144-8.6995.701
16A_G43:C12_A-0.087-0.0450.28414.4783.9563.095
117A_U28:A33_A-0.036-0.155-0.1873.1213.5923.183
19A_U46:A9_A0.38-0.229-0.52615.001-15.4973.294
111A_U48:A40_A4.372-2.305-0.592-16.47-4.478-91.089

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.