A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 9-Oct-2019 number of released structures: 10416
Search for released structures

NDB ID: NA2454  PDB ID: 3WA9 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11I_DA1:DT292_J120
14I_DA4:DT289_J120
15I_DA5:DT288_J120
17I_DA7:DT286_J120
111I_DA11:DT282_J120
117I_DA17:DT276_J120
119I_DA19:DT274_J120
124I_DA24:DT269_J120
126I_DA27:DT266_J120
127I_DA28:DT265_J120
128I_DA29:DT264_J120
129I_DA30:DT263_J120
134I_DA35:DT258_J120
139I_DA41:DT252_J120
140I_DA42:DT251_J120
141I_DA43:DT250_J120
149I_DA51:DT242_J120
151I_DA54:DT239_J00
152I_DA55:DT238_J120
153I_DA57:DT236_J120
157I_DA61:DT232_J120
163I_DA67:DT226_J120
168I_DA72:DT221_J120
169I_DA73:DT220_J120
173I_DA77:DT216_J120
178I_DA82:DT211_J120
179I_DA83:DT210_J120
181I_DA85:DT208_J120
191I_DA95:DT198_J120
195I_DA99:DT194_J120
198I_DA102:DT191_J120
1105I_DA109:DT184_J120
1106I_DA110:DT183_J120
1107I_DA111:DT182_J120
1109I_DA113:DT180_J120
1111I_DA115:DT178_J120
1119I_DA124:DT169_J120
1121I_DA126:DT167_J120
1122I_DA127:DT166_J120
1128I_DA133:DT160_J120
1134I_DA139:DT154_J120
1136I_DA141:DT152_J120
1140I_DA145:DT148_J120
13I_DC3:DG290_J10
19I_DC9:DG284_J10
110I_DC10:DG283_J119
112I_DC12:DG281_J119
113I_DC13:DG280_J119
116I_DC16:DG277_J119
122I_DC22:DG271_J119
125I_DC25:DG267_J00
142I_DC44:DG249_J10
145I_DC47:DG246_J10
147I_DC49:DG244_J119
148I_DC50:DG243_J00
150I_DC53:DG240_J10
156I_DC60:DG233_J119
162I_DC66:DG227_J119
165I_DC69:DG224_J119
172I_DC76:DG217_J119
175I_DC79:DG214_J119
180I_DC84:DG209_J119
184I_DC88:DG205_J10
185I_DC89:DG204_J119
197I_DC101:DG192_J119
1103I_DC107:DG186_J119
1104I_DC108:DG185_J00
1110I_DC114:DG179_J119
1112I_DC116:DG177_J119
1124I_DC129:DG164_J119
1127I_DC132:DG161_J119
115I_DG15:DC278_J119
118I_DG18:DC275_J119
130I_DG31:DC262_J119
132I_DG33:DC260_J10
138I_DG40:DC253_J119
144I_DG46:DC247_J10
154I_DG58:DC235_J119
155I_DG59:DC234_J119
159I_DG63:DC230_J119
164I_DG68:DC225_J119
167I_DG71:DC222_J119
174I_DG78:DC215_J119
177I_DG81:DC212_J119
183I_DG87:DC206_J119
190I_DG94:DC199_J119
193I_DG97:DC196_J119
194I_DG98:DC195_J10
196I_DG100:DC193_J119
199I_DG103:DC190_J00
1116I_DG121:DC172_J00
1117I_DG122:DC171_J00
1120I_DG125:DC168_J10
1126I_DG131:DC162_J119
1129I_DG134:DC159_J119
1130I_DG135:DC158_J119
1132I_DG137:DC156_J119
1133I_DG138:DC155_J119
1139I_DG144:DC149_J10
12I_DT2:DA291_J120
16I_DT6:DA287_J120
18I_DT8:DA285_J120
114I_DT14:DA279_J120
120I_DT20:DA273_J120
121I_DT21:DA272_J120
123I_DT23:DA270_J120
131I_DT32:DA261_J120
133I_DT34:DA259_J120
135I_DT36:DA257_J120
136I_DT37:DA256_J120
137I_DT38:DA255_J00
143I_DT45:DA248_J120
146I_DT48:DA245_J120
158I_DT62:DA231_J120
160I_DT64:DA229_J120
161I_DT65:DA228_J120
166I_DT70:DA223_J120
170I_DT74:DA219_J120
171I_DT75:DA218_J120
176I_DT80:DA213_J120
182I_DT86:DA207_J120
186I_DT90:DA203_J120
187I_DT91:DA202_J120
188I_DT92:DA201_J120
189I_DT93:DA200_J120
192I_DT96:DA197_J120
1100I_DT104:DA189_J120
1101I_DT105:DA188_J120
1102I_DT106:DA187_J120
1108I_DT112:DA181_J120
1113I_DT117:DA176_J120
1114I_DT118:DA175_J120
1115I_DT119:DA174_J120
1118I_DT123:DA170_J120
1123I_DT128:DA165_J120
1125I_DT130:DA163_J120
1131I_DT136:DA157_J120
1135I_DT140:DA153_J120
1137I_DT142:DA151_J120
1138I_DT143:DA150_J120
1141I_DT146:DA147_J120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)