A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Oct-2020 number of released structures: 11024
Search for released structures

NDB ID: NA2998  PDB ID: 3WTS 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11EE_DA101DG102:DC14DT15_DD0.495-0.7113.347-0.9032.75626.372-2.283-1.3193.2386.0171.97226.528
13EE_DA103DG104:DC12DT13_DD0.721-0.1053.1591.6935.98226.385-1.692-1.1233.09912.879-3.64527.094
16EE_DA106DT107:DA9DT10_DD0.103-0.6333.3251.7746.26426.981-2.8260.2113.10213.183-3.73327.741
112EE_DC112DT113:DA3DG4_DD-0.333-0.3233.7932.382.31439.917-0.7770.8013.7443.382-3.47940.049
115EJ_DC115DA101:DT15DG1_ID-0.5260.93.3614.396-0.53-22.204-2.0910.3323.421.3611.271-22.636
12EE_DG102DA103:DT13DC14_DD-0.754-0.3813.413-3.4836.16935.254-1.5380.7023.35810.065.68135.937
14EE_DG104DG105:DC11DC12_DD-1.168-0.6453.604-4.9945.32535.14-1.8971.13.5988.7048.16435.867
15EE_DG105DA106:DT10DC11_DD-0.37-0.3463.192-2.6655.00432.695-1.4240.2123.1268.8074.69133.169
18EE_DG108DT109:DA7DC8_DD-1.195-0.8143.239-3.089-3.87829.312-0.7521.6653.421-7.5966.0529.719
110EE_DG110DG111:DC5DC6_DD-0.741-0.9723.316-1.4645.87234.703-2.4751.0093.1429.7522.43235.211
111EE_DG111DC112:DG4DC5_DD0.464-0.7423.156-2.1195.90129.628-2.541-1.2912.91711.3794.08530.27
17EE_DT107DG108:DC8DA9_DD-0.010.1573.681-4.045.11643.279-0.34-0.4223.6626.895.44143.744
19EE_DT109DG110:DC6DA7_DD-0.30.522.918-3.4731.89331.7450.636-0.0222.9583.4456.31931.984
113EE_DT113DT114:DA2DA3_DD-0.5060.2493.234-0.371-2.31434.3450.7760.7993.216-3.9120.62834.423
114EE_DT114DC115:DG1DA2_DD0.2550.5323.418-2.521-0.73941.7770.826-0.6313.388-1.0353.53141.856
116JJ_DA101DG102:DC14DT15_II-0.107-0.3043.243-3.6332.62833.178-0.957-0.4073.2034.5766.32733.471
118JJ_DA103DG104:DC12DT13_II1.207-0.413.2810.9271.71930.175-1.136-2.1243.2883.298-1.77730.236
121JJ_DA106DT107:DA9DT10_II0.239-0.3663.196-0.1435.54527.826-1.982-0.523.06511.3870.29428.363
127JJ_DC112DT113:DA3DG4_II-0.208-0.3343.743.152-1.17339.191-0.3380.7363.721-1.745-4.68839.33
117JJ_DG102DA103:DT13DC14_II-0.8920.1993.276-3.3140.81437.3820.2010.9473.3441.2675.15837.532
119JJ_DG104DG105:DC11DC12_II-1.18-0.6453.393-5.4153.27935.154-1.5531.0983.4595.3768.87635.702
120JJ_DG105DA106:DT10DC11_II-0.33-0.3383.216-2.2937.04631.458-1.8270.1953.08512.7754.15832.298
123JJ_DG108DT109:DA7DC8_II-0.912-0.813.304-0.773-0.61729.324-1.4631.6323.342-1.2181.52729.34
125JJ_DG110DG111:DC5DC6_II-0.601-0.8033.3360.3234.22235.46-1.9231.0273.2166.902-0.52935.704
126JJ_DG111DC112:DG4DC5_II0.437-0.8183.176-1.796.77829.689-2.825-1.1662.89213.03.43230.488
122JJ_DT107DG108:DC8DA9_II-0.224-0.0023.699-3.8253.70743.726-0.398-0.1093.6934.9565.11344.033
124JJ_DT109DG110:DC6DA7_II-0.480.432.901-4.486-0.31232.4560.810.1582.935-0.5557.97932.758
128JJ_DT113DT114:DA2DA3_II-0.4010.0253.259-2.933-2.22734.4770.3840.2233.273-3.7444.93134.668
129JJ_DT114DC115:DG1DA2_II0.407-0.0643.489-0.788-0.50639.147-0.031-0.7083.481-0.7551.17639.158

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.