A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: NA2549  PDB ID: 3ZPL 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11C_DA1:DT22_D120
12C_DA2:DT21_D120
13C_DA3:DT20_D120
15C_DA5:DT18_D120
19C_DA9:DT14_D120
111C_DA11:DT12_D120
116C_DA16:DT7_D120
117C_DA17:DT6_D120
113C_DC13:DG10_D119
115C_DC15:DG8_D119
119C_DC19:DG4_D119
14C_DG4:DC19_D119
18C_DG8:DC15_D119
110C_DG10:DC13_D119
16C_DT6:DA17_D120
17C_DT7:DA16_D120
112C_DT12:DA11_D120
114C_DT14:DA9_D120
118C_DT18:DA5_D120
120C_DT20:DA3_D120
121C_DT21:DA2_D120
122C_DT22:DA1_D120
123G_DA1:DT22_H120
124G_DA2:DT21_H120
125G_DA3:DT20_H120
127G_DA5:DT18_H120
131G_DA9:DT14_H120
133G_DA11:DT12_H120
138G_DA16:DT7_H120
139G_DA17:DT6_H120
135G_DC13:DG10_H119
137G_DC15:DG8_H119
141G_DC19:DG4_H119
126G_DG4:DC19_H119
130G_DG8:DC15_H119
132G_DG10:DC13_H119
128G_DT6:DA17_H120
129G_DT7:DA16_H120
134G_DT12:DA11_H120
136G_DT14:DA9_H120
140G_DT18:DA5_H120
142G_DT20:DA3_H120
143G_DT21:DA2_H120
144G_DT22:DA1_H120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)