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NDB ID: NA0031  PDB ID: 3HOV 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
3HOV|1|P|A|103HOV|1|P|A|100BPh
3HOV|1|P|A|103HOV|1|P|C|9s53
3HOV|1|P|A|33HOV|1|P|A|30BPh
3HOV|1|P|A|33HOV|1|P|C|4s35
3HOV|1|P|A|33HOV|1|P|G|2s53
3HOV|1|P|A|63HOV|1|P|A|60BPh
3HOV|1|P|A|63HOV|1|P|C|5s53
3HOV|1|P|A|63HOV|1|P|G|7s35
3HOV|1|P|C|13HOV|1|P|C|1n0BP
3HOV|1|P|C|43HOV|1|P|A|3s53
3HOV|1|P|C|43HOV|1|P|C|40BPh
3HOV|1|P|C|43HOV|1|P|C|5s35
3HOV|1|P|C|53HOV|1|P|A|6s35
3HOV|1|P|C|53HOV|1|P|C|4s53
3HOV|1|P|C|53HOV|1|P|C|50BPh
3HOV|1|P|C|93HOV|1|P|A|10s35
3HOV|1|P|C|93HOV|1|P|C|90BPh
3HOV|1|P|C|93HOV|1|P|G|8s53
3HOV|1|P|G|23HOV|1|P|A|3s35
3HOV|1|P|G|23HOV|1|P|G|2n0BP
3HOV|1|P|G|73HOV|1|P|A|6s53
3HOV|1|P|G|73HOV|1|P|G|7n0BP
3HOV|1|P|G|73HOV|1|P|G|8s35
3HOV|1|P|G|83HOV|1|P|C|9s35
3HOV|1|P|G|83HOV|1|P|G|7s53
3HOV|1|P|G|83HOV|1|P|G|80BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (7)Relative Frequency
0BPh71.000
Base-StackingCount (4)Relative Frequency
s5341.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)