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As of 21-Aug-2019 number of released structures: 10343
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NDB ID: NA0819  PDB ID: 3OXJ 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
3OXJ|1|A|A|113OXJ|1|A|A|110BPh
3OXJ|1|A|A|113OXJ|1|A|C|30cSS
3OXJ|1|A|A|113OXJ|1|A|C|31ncSS
3OXJ|1|A|A|113OXJ|1|A|C|74ns35
3OXJ|1|A|A|113OXJ|1|A|G|10s53
3OXJ|1|A|A|113OXJ|1|A|G|73tSS
3OXJ|1|A|A|11||||4_5553OXJ|1|A|A|11||||4_5550BPh
3OXJ|1|A|A|11||||4_5553OXJ|1|A|C|30||||4_555cSS
3OXJ|1|A|A|11||||4_5553OXJ|1|A|C|31||||4_555ncSS
3OXJ|1|A|A|11||||4_5553OXJ|1|A|C|74||||4_555ns35
3OXJ|1|A|A|11||||4_5553OXJ|1|A|G|10||||4_555s53
3OXJ|1|A|A|11||||4_5553OXJ|1|A|G|73||||4_555tSS
3OXJ|1|A|A|133OXJ|1|A|A|21
3OXJ|1|A|A|133OXJ|1|A|A|75s55
3OXJ|1|A|A|13||||4_5553OXJ|1|A|A|21||||4_555
3OXJ|1|A|A|13||||4_5553OXJ|1|A|A|75||||4_555s55
3OXJ|1|A|A|143OXJ|1|A|A|140BPh
3OXJ|1|A|A|143OXJ|1|A|C|15s35
3OXJ|1|A|A|143OXJ|1|A|C|28ns55
3OXJ|1|A|A|143OXJ|1|A|G|12s53
3OXJ|1|A|A|143OXJ|1|A|U|27cWW
3OXJ|1|A|A|14||||4_5553OXJ|1|A|A|14||||4_5550BPh
3OXJ|1|A|A|14||||4_5553OXJ|1|A|C|15||||4_555s35
3OXJ|1|A|A|14||||4_5553OXJ|1|A|C|28||||4_555ns55
3OXJ|1|A|A|14||||4_5553OXJ|1|A|G|12||||4_555s53
3OXJ|1|A|A|14||||4_5553OXJ|1|A|U|27||||4_555cWW
3OXJ|1|A|A|213OXJ|1|A|A|21n0BP
3OXJ|1|A|A|213OXJ|1|A|A|22s35
3OXJ|1|A|A|213OXJ|1|A|U|20s53
3OXJ|1|A|A|21||||4_5553OXJ|1|A|A|21||||4_555n0BP
3OXJ|1|A|A|21||||4_5553OXJ|1|A|A|22||||4_555s35
3OXJ|1|A|A|21||||4_5553OXJ|1|A|U|20||||4_555s53
3OXJ|1|A|A|223OXJ|1|A|A|21s53
3OXJ|1|A|A|223OXJ|1|A|A|220BPh
3OXJ|1|A|A|223OXJ|1|A|U|23s35
3OXJ|1|A|A|22||||4_5553OXJ|1|A|A|21||||4_555s53
3OXJ|1|A|A|22||||4_5553OXJ|1|A|A|22||||4_5550BPh
3OXJ|1|A|A|22||||4_5553OXJ|1|A|U|23||||4_555s35
3OXJ|1|A|A|333OXJ|1|A|A|330BPh
3OXJ|1|A|A|333OXJ|1|A|A|81s55
3OXJ|1|A|A|333OXJ|1|A|A|9s35
3OXJ|1|A|A|333OXJ|1|A|G|8
3OXJ|1|A|A|333OXJ|1|A|G|80cSS
3OXJ|1|A|A|333OXJ|1|B|A|65
3OXJ|1|A|A|33||||4_5553OXJ|1|A|A|33||||4_5550BPh
3OXJ|1|A|A|33||||4_5553OXJ|1|A|A|81||||4_555s55
3OXJ|1|A|A|33||||4_5553OXJ|1|A|A|9||||4_555s35
3OXJ|1|A|A|33||||4_5553OXJ|1|A|G|80||||4_555cSS
3OXJ|1|A|A|33||||4_5553OXJ|1|A|G|8||||4_555
3OXJ|1|A|A|33||||4_5553OXJ|1|B|A|65||||4_555
3OXJ|1|A|A|343OXJ|1|A|A|340BPh
3OXJ|1|A|A|343OXJ|1|A|A|71tHS
3OXJ|1|A|A|343OXJ|1|A|G|35s35
3OXJ|1|A|A|34||||4_5553OXJ|1|A|A|34||||4_5550BPh
3OXJ|1|A|A|34||||4_5553OXJ|1|A|A|71||||4_555tHS
3OXJ|1|A|A|34||||4_5553OXJ|1|A|G|35||||4_555s35
3OXJ|1|A|A|373OXJ|1|A|A|370BPh
3OXJ|1|A|A|373OXJ|1|A|C|68ns55
3OXJ|1|A|A|373OXJ|1|A|G|36s53
3OXJ|1|A|A|373OXJ|1|A|G|38s35
3OXJ|1|A|A|373OXJ|1|A|U|67cWW
3OXJ|1|A|A|37||||4_5553OXJ|1|A|A|37||||4_5550BPh
3OXJ|1|A|A|37||||4_5553OXJ|1|A|C|68||||4_555ns55
3OXJ|1|A|A|37||||4_5553OXJ|1|A|G|36||||4_555s53
3OXJ|1|A|A|37||||4_5553OXJ|1|A|G|38||||4_555s35
3OXJ|1|A|A|37||||4_5553OXJ|1|A|U|67||||4_555cWW
3OXJ|1|A|A|403OXJ|1|A|A|400BPh
3OXJ|1|A|A|403OXJ|1|A|A|41s35
3OXJ|1|A|A|403OXJ|1|A|A|63s55
3OXJ|1|A|A|403OXJ|1|A|C|39ns53
3OXJ|1|A|A|403OXJ|1|B|G|84
3OXJ|1|A|A|403OXJ|1|B|U|6cSS
3OXJ|1|A|A|40||||4_5553OXJ|1|A|A|40||||4_5550BPh
3OXJ|1|A|A|40||||4_5553OXJ|1|A|A|41||||4_555s35
3OXJ|1|A|A|40||||4_5553OXJ|1|A|A|63||||4_555s55
3OXJ|1|A|A|40||||4_5553OXJ|1|A|C|39||||4_555ns53
3OXJ|1|A|A|40||||4_5553OXJ|1|B|G|84||||4_555
3OXJ|1|A|A|40||||4_5553OXJ|1|B|U|6||||4_555cSS
3OXJ|1|A|A|413OXJ|1|A|A|40s53
3OXJ|1|A|A|413OXJ|1|A|A|410BPh
3OXJ|1|A|A|413OXJ|1|A|G|42s35
3OXJ|1|A|A|413OXJ|1|A|G|62tHS
3OXJ|1|A|A|413OXJ|1|B|A|85
3OXJ|1|A|A|413OXJ|1|B|G|84tSS
3OXJ|1|A|A|41||||4_5553OXJ|1|A|A|40||||4_555s53
3OXJ|1|A|A|41||||4_5553OXJ|1|A|A|41||||4_5550BPh
3OXJ|1|A|A|41||||4_5553OXJ|1|A|G|42||||4_555s35
3OXJ|1|A|A|41||||4_5553OXJ|1|A|G|62||||4_555tHS
3OXJ|1|A|A|41||||4_5553OXJ|1|B|A|85||||4_555
3OXJ|1|A|A|41||||4_5553OXJ|1|B|G|84||||4_555tSS
3OXJ|1|A|A|523OXJ|1|A|A|520BPh
3OXJ|1|A|A|523OXJ|1|A|A|53s35
3OXJ|1|A|A|523OXJ|1|A|G|50
3OXJ|1|A|A|52||||4_5553OXJ|1|A|A|52||||4_5550BPh
3OXJ|1|A|A|52||||4_5553OXJ|1|A|A|53||||4_555s35
3OXJ|1|A|A|52||||4_5553OXJ|1|A|G|50||||4_555
3OXJ|1|A|A|533OXJ|1|A|A|52s53
3OXJ|1|A|A|533OXJ|1|A|A|530BPh
3OXJ|1|A|A|533OXJ|1|A|C|54s35
3OXJ|1|A|A|533OXJ|1|A|G|50tHS
3OXJ|1|A|A|53||||4_5553OXJ|1|A|A|52||||4_555s53
3OXJ|1|A|A|53||||4_5553OXJ|1|A|A|53||||4_5550BPh
3OXJ|1|A|A|53||||4_5553OXJ|1|A|C|54||||4_555s35
3OXJ|1|A|A|53||||4_5553OXJ|1|A|G|50||||4_555tHS
3OXJ|1|A|A|573OXJ|1|A|A|570BPh
3OXJ|1|A|A|573OXJ|1|A|C|56s53
3OXJ|1|A|A|573OXJ|1|A|G|47s55
3OXJ|1|A|A|573OXJ|1|A|G|58s35
3OXJ|1|A|A|573OXJ|1|A|U|46cWW
3OXJ|1|A|A|57||||4_5553OXJ|1|A|A|57||||4_5550BPh
3OXJ|1|A|A|57||||4_5553OXJ|1|A|C|56||||4_555s53
3OXJ|1|A|A|57||||4_5553OXJ|1|A|G|47||||4_555s55
3OXJ|1|A|A|57||||4_5553OXJ|1|A|G|58||||4_555s35
3OXJ|1|A|A|57||||4_5553OXJ|1|A|U|46||||4_555cWW
3OXJ|1|A|A|593OXJ|1|A|A|590BPh
3OXJ|1|A|A|593OXJ|1|A|C|45s55
3OXJ|1|A|A|593OXJ|1|A|G|58s53
3OXJ|1|A|A|593OXJ|1|A|G|60s35
3OXJ|1|A|A|593OXJ|1|A|U|44cWW
3OXJ|1|A|A|59||||4_5553OXJ|1|A|A|59||||4_5550BPh
3OXJ|1|A|A|59||||4_5553OXJ|1|A|C|45||||4_555s55
3OXJ|1|A|A|59||||4_5553OXJ|1|A|G|58||||4_555s53
3OXJ|1|A|A|59||||4_5553OXJ|1|A|G|60||||4_555s35
3OXJ|1|A|A|59||||4_5553OXJ|1|A|U|44||||4_555cWW
3OXJ|1|A|A|633OXJ|1|A|A|40s55
3OXJ|1|A|A|633OXJ|1|A|A|630BPh
3OXJ|1|A|A|633OXJ|1|A|A|64s35
3OXJ|1|A|A|633OXJ|1|A|C|39ns33
3OXJ|1|A|A|633OXJ|1|B|A|83cSS
3OXJ|1|A|A|633OXJ|1|B|G|7
3OXJ|1|A|A|63||||4_5553OXJ|1|A|A|40||||4_555s55
3OXJ|1|A|A|63||||4_5553OXJ|1|A|A|63||||4_5550BPh
3OXJ|1|A|A|63||||4_5553OXJ|1|A|A|64||||4_555s35
3OXJ|1|A|A|63||||4_5553OXJ|1|A|C|39||||4_555ns33
3OXJ|1|A|A|63||||4_5553OXJ|1|B|A|83||||4_555cSS
3OXJ|1|A|A|63||||4_5553OXJ|1|B|G|7||||4_555
3OXJ|1|A|A|643OXJ|1|A|A|63s53
3OXJ|1|A|A|643OXJ|1|A|A|640BPh
3OXJ|1|A|A|643OXJ|1|A|C|39tHW
3OXJ|1|A|A|643OXJ|1|A|C|66s35
3OXJ|1|A|A|643OXJ|1|B|G|7tSS
3OXJ|1|A|A|643OXJ|1|B|G|8
3OXJ|1|A|A|64||||4_5553OXJ|1|A|A|63||||4_555s53
3OXJ|1|A|A|64||||4_5553OXJ|1|A|A|64||||4_5550BPh
3OXJ|1|A|A|64||||4_5553OXJ|1|A|C|39||||4_555tHW
3OXJ|1|A|A|64||||4_5553OXJ|1|A|C|66||||4_555s35
3OXJ|1|A|A|64||||4_5553OXJ|1|B|G|7||||4_555tSS
3OXJ|1|A|A|64||||4_5553OXJ|1|B|G|8||||4_555
3OXJ|1|A|A|653OXJ|1|A|A|650BPh
3OXJ|1|A|A|653OXJ|1|B|A|65s55
3OXJ|1|A|A|65||||4_5553OXJ|1|A|A|65||||4_5550BPh
3OXJ|1|A|A|65||||4_5553OXJ|1|B|A|65||||4_555s55
3OXJ|1|A|A|713OXJ|1|A|A|34tSH
3OXJ|1|A|A|713OXJ|1|A|A|710BPh
3OXJ|1|A|A|713OXJ|1|A|C|70s53
3OXJ|1|A|A|713OXJ|1|A|G|32cWH
3OXJ|1|A|A|713OXJ|1|A|G|35s55
3OXJ|1|A|A|713OXJ|1|A|G|72s35
3OXJ|1|A|A|713OXJ|1|A|U|69
3OXJ|1|A|A|71||||4_5553OXJ|1|A|A|34||||4_555tSH
3OXJ|1|A|A|71||||4_5553OXJ|1|A|A|71||||4_5550BPh
3OXJ|1|A|A|71||||4_5553OXJ|1|A|C|70||||4_555s53
3OXJ|1|A|A|71||||4_5553OXJ|1|A|G|32||||4_555cWH
3OXJ|1|A|A|71||||4_5553OXJ|1|A|G|35||||4_555s55
3OXJ|1|A|A|71||||4_5553OXJ|1|A|G|72||||4_555s35
3OXJ|1|A|A|71||||4_5553OXJ|1|A|U|69||||4_555
3OXJ|1|A|A|753OXJ|1|A|A|13s55
3OXJ|1|A|A|753OXJ|1|A|A|21
3OXJ|1|A|A|753OXJ|1|A|A|750BPh
3OXJ|1|A|A|753OXJ|1|A|A|76s35
3OXJ|1|A|A|75||||4_5553OXJ|1|A|A|13||||4_555s55
3OXJ|1|A|A|75||||4_5553OXJ|1|A|A|21||||4_555
3OXJ|1|A|A|75||||4_5553OXJ|1|A|A|75||||4_5550BPh
3OXJ|1|A|A|75||||4_5553OXJ|1|A|A|76||||4_555s35
3OXJ|1|A|A|763OXJ|1|A|A|75s53
3OXJ|1|A|A|763OXJ|1|A|A|760BPh
3OXJ|1|A|A|763OXJ|1|A|A|77s35
3OXJ|1|A|A|76||||4_5553OXJ|1|A|A|75||||4_555s53
3OXJ|1|A|A|76||||4_5553OXJ|1|A|A|76||||4_5550BPh
3OXJ|1|A|A|76||||4_5553OXJ|1|A|A|77||||4_555s35
3OXJ|1|A|A|773OXJ|1|A|A|76s53
3OXJ|1|A|A|773OXJ|1|A|A|770BPh
3OXJ|1|A|A|773OXJ|1|A|A|78s35
3OXJ|1|A|A|773OXJ|1|A|C|74n7BP
3OXJ|1|A|A|77||||4_5553OXJ|1|A|A|76||||4_555s53
3OXJ|1|A|A|77||||4_5553OXJ|1|A|A|77||||4_5550BPh
3OXJ|1|A|A|77||||4_5553OXJ|1|A|A|78||||4_555s35
3OXJ|1|A|A|77||||4_5553OXJ|1|A|C|74||||4_555n7BP
3OXJ|1|A|A|783OXJ|1|A|A|77s53
3OXJ|1|A|A|783OXJ|1|A|A|780BPh
3OXJ|1|A|A|783OXJ|1|A|G|79s35
3OXJ|1|A|A|78||||4_5553OXJ|1|A|A|77||||4_555s53
3OXJ|1|A|A|78||||4_5553OXJ|1|A|A|78||||4_5550BPh
3OXJ|1|A|A|78||||4_5553OXJ|1|A|G|79||||4_555s35
3OXJ|1|A|A|813OXJ|1|A|A|33s55
3OXJ|1|A|A|813OXJ|1|A|A|810BPh
3OXJ|1|A|A|813OXJ|1|A|C|82s35
3OXJ|1|A|A|813OXJ|1|A|G|8tHS
3OXJ|1|A|A|813OXJ|1|B|A|65
3OXJ|1|A|A|81||||4_5553OXJ|1|A|A|33||||4_555s55
3OXJ|1|A|A|81||||4_5553OXJ|1|A|A|81||||4_5550BPh
3OXJ|1|A|A|81||||4_5553OXJ|1|A|C|82||||4_555s35
3OXJ|1|A|A|81||||4_5553OXJ|1|A|G|8||||4_555tHS
3OXJ|1|A|A|81||||4_5553OXJ|1|B|A|65||||4_555
3OXJ|1|A|A|833OXJ|1|A|A|830BPh
3OXJ|1|A|A|833OXJ|1|A|C|82s53
3OXJ|1|A|A|833OXJ|1|A|G|7s55
3OXJ|1|A|A|833OXJ|1|A|G|84s35
3OXJ|1|A|A|833OXJ|1|A|U|6cWW
3OXJ|1|A|A|833OXJ|1|B|A|63cSS
3OXJ|1|A|A|83||||4_5553OXJ|1|A|A|83||||4_5550BPh
3OXJ|1|A|A|83||||4_5553OXJ|1|A|C|82||||4_555s53
3OXJ|1|A|A|83||||4_5553OXJ|1|A|G|7||||4_555s55
3OXJ|1|A|A|83||||4_5553OXJ|1|A|G|84||||4_555s35
3OXJ|1|A|A|83||||4_5553OXJ|1|A|U|6||||4_555cWW
3OXJ|1|A|A|83||||4_5553OXJ|1|B|A|63||||4_555cSS
3OXJ|1|A|A|853OXJ|1|A|A|850BPh
3OXJ|1|A|A|853OXJ|1|A|G|84s53
3OXJ|1|A|A|853OXJ|1|A|G|86s35
3OXJ|1|A|A|853OXJ|1|A|U|4cWW
3OXJ|1|A|A|85||||4_5553OXJ|1|A|A|85||||4_5550BPh
3OXJ|1|A|A|85||||4_5553OXJ|1|A|G|84||||4_555s53
3OXJ|1|A|A|85||||4_5553OXJ|1|A|G|86||||4_555s35
3OXJ|1|A|A|85||||4_5553OXJ|1|A|U|4||||4_555cWW
3OXJ|1|A|A|93OXJ|1|A|A|33s53n2BP
3OXJ|1|A|A|93OXJ|1|A|A|90BPh
3OXJ|1|A|A|93OXJ|1|A|G|10s35
3OXJ|1|A|A|93OXJ|1|A|G|80tHS
3OXJ|1|A|A|9||||4_5553OXJ|1|A|A|33||||4_555s53n2BP
3OXJ|1|A|A|9||||4_5553OXJ|1|A|A|9||||4_5550BPh
3OXJ|1|A|A|9||||4_5553OXJ|1|A|G|10||||4_555s35
3OXJ|1|A|A|9||||4_5553OXJ|1|A|G|80||||4_555tHS
3OXJ|1|A|C|153OXJ|1|A|A|14s53
3OXJ|1|A|C|153OXJ|1|A|C|150BPh
3OXJ|1|A|C|153OXJ|1|A|C|16s35
3OXJ|1|A|C|153OXJ|1|A|G|26cWW
3OXJ|1|A|C|15||||4_5553OXJ|1|A|A|14||||4_555s53
3OXJ|1|A|C|15||||4_5553OXJ|1|A|C|15||||4_5550BPh
3OXJ|1|A|C|15||||4_5553OXJ|1|A|C|16||||4_555s35
3OXJ|1|A|C|15||||4_5553OXJ|1|A|G|26||||4_555cWW
3OXJ|1|A|C|163OXJ|1|A|C|15s53
3OXJ|1|A|C|163OXJ|1|A|C|160BPh
3OXJ|1|A|C|163OXJ|1|A|G|17s35
3OXJ|1|A|C|163OXJ|1|A|G|25cWW
3OXJ|1|A|C|163OXJ|1|A|G|26s55
3OXJ|1|A|C|16||||4_5553OXJ|1|A|C|15||||4_555s53
3OXJ|1|A|C|16||||4_5553OXJ|1|A|C|16||||4_5550BPh
3OXJ|1|A|C|16||||4_5553OXJ|1|A|G|17||||4_555s35
3OXJ|1|A|C|16||||4_5553OXJ|1|A|G|25||||4_555cWW
3OXJ|1|A|C|16||||4_5553OXJ|1|A|G|26||||4_555s55
3OXJ|1|A|C|243OXJ|1|A|C|240BPh
3OXJ|1|A|C|243OXJ|1|A|G|17cWW
3OXJ|1|A|C|243OXJ|1|A|G|25ns35
3OXJ|1|A|C|243OXJ|1|A|U|23s53
3OXJ|1|A|C|24||||4_5553OXJ|1|A|C|24||||4_5550BPh
3OXJ|1|A|C|24||||4_5553OXJ|1|A|G|17||||4_555cWW
3OXJ|1|A|C|24||||4_5553OXJ|1|A|G|25||||4_555ns35
3OXJ|1|A|C|24||||4_5553OXJ|1|A|U|23||||4_555s53
3OXJ|1|A|C|283OXJ|1|A|A|14ns55
3OXJ|1|A|C|283OXJ|1|A|C|280BPh
3OXJ|1|A|C|283OXJ|1|A|G|12cWW
3OXJ|1|A|C|283OXJ|1|A|G|29ns35
3OXJ|1|A|C|283OXJ|1|A|U|27s53
3OXJ|1|A|C|28||||4_5553OXJ|1|A|A|14||||4_555ns55
3OXJ|1|A|C|28||||4_5553OXJ|1|A|C|28||||4_5550BPh
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3OXJ|1|B|G|553OXJ|1|B|G|550BPh
3OXJ|1|B|G|55||||4_5553OXJ|1|B|C|48||||4_555cWW
3OXJ|1|B|G|55||||4_5553OXJ|1|B|C|54||||4_555s53
3OXJ|1|B|G|55||||4_5553OXJ|1|B|C|56||||4_555s35
3OXJ|1|B|G|55||||4_5553OXJ|1|B|G|49||||4_555s55
3OXJ|1|B|G|55||||4_5553OXJ|1|B|G|55||||4_5550BPh
3OXJ|1|B|G|583OXJ|1|B|A|57s53
3OXJ|1|B|G|583OXJ|1|B|A|59s35
3OXJ|1|B|G|583OXJ|1|B|C|45cWW
3OXJ|1|B|G|583OXJ|1|B|G|580BPh
3OXJ|1|B|G|583OXJ|1|B|U|46s55
3OXJ|1|B|G|58||||4_5553OXJ|1|B|A|57||||4_555s53
3OXJ|1|B|G|58||||4_5553OXJ|1|B|A|59||||4_555s35
3OXJ|1|B|G|58||||4_5553OXJ|1|B|C|45||||4_555cWW
3OXJ|1|B|G|58||||4_5553OXJ|1|B|G|58||||4_5550BPh
3OXJ|1|B|G|58||||4_5553OXJ|1|B|U|46||||4_555s55
3OXJ|1|B|G|603OXJ|1|B|A|59s53
3OXJ|1|B|G|603OXJ|1|B|C|43cWW
3OXJ|1|B|G|603OXJ|1|B|G|600BPh
3OXJ|1|B|G|603OXJ|1|B|U|44s55
3OXJ|1|B|G|603OXJ|1|B|U|61s35
3OXJ|1|B|G|60||||4_5553OXJ|1|B|A|59||||4_555s53
3OXJ|1|B|G|60||||4_5553OXJ|1|B|C|43||||4_555cWW
3OXJ|1|B|G|60||||4_5553OXJ|1|B|G|60||||4_5550BPh
3OXJ|1|B|G|60||||4_5553OXJ|1|B|U|44||||4_555s55
3OXJ|1|B|G|60||||4_5553OXJ|1|B|U|61||||4_555s35
3OXJ|1|B|G|623OXJ|1|B|A|405BPh
3OXJ|1|B|G|623OXJ|1|B|A|41tSHn3BP
3OXJ|1|B|G|623OXJ|1|B|G|620BPh
3OXJ|1|B|G|623OXJ|1|B|U|61s53
3OXJ|1|B|G|62||||4_5553OXJ|1|B|A|40||||4_5555BPh
3OXJ|1|B|G|62||||4_5553OXJ|1|B|A|41||||4_555tSHn3BP
3OXJ|1|B|G|62||||4_5553OXJ|1|B|G|62||||4_5550BPh
3OXJ|1|B|G|62||||4_5553OXJ|1|B|U|61||||4_555s53
3OXJ|1|B|G|73OXJ|1|A|A|64tSS
3OXJ|1|B|G|73OXJ|1|B|A|83s55
3OXJ|1|B|G|73OXJ|1|B|C|82cWW
3OXJ|1|B|G|73OXJ|1|B|G|70BPh
3OXJ|1|B|G|73OXJ|1|B|G|8s35
3OXJ|1|B|G|73OXJ|1|B|U|6s53
3OXJ|1|B|G|723OXJ|1|B|A|71s53
3OXJ|1|B|G|723OXJ|1|B|C|31cWW
3OXJ|1|B|G|723OXJ|1|B|G|32s53
3OXJ|1|B|G|723OXJ|1|B|G|720BPh
3OXJ|1|B|G|723OXJ|1|B|G|73s35
3OXJ|1|B|G|72||||4_5553OXJ|1|B|A|71||||4_555s53
3OXJ|1|B|G|72||||4_5553OXJ|1|B|C|31||||4_555cWW
3OXJ|1|B|G|72||||4_5553OXJ|1|B|G|32||||4_555s53
3OXJ|1|B|G|72||||4_5553OXJ|1|B|G|72||||4_5550BPh
3OXJ|1|B|G|72||||4_5553OXJ|1|B|G|73||||4_555s35
3OXJ|1|B|G|733OXJ|1|B|A|11tSS
3OXJ|1|B|G|733OXJ|1|B|C|30cWW
3OXJ|1|B|G|733OXJ|1|B|C|31s55
3OXJ|1|B|G|733OXJ|1|B|C|74s35
3OXJ|1|B|G|733OXJ|1|B|G|72s53
3OXJ|1|B|G|733OXJ|1|B|G|730BPh
3OXJ|1|B|G|73||||4_5553OXJ|1|B|A|11||||4_555tSS
3OXJ|1|B|G|73||||4_5553OXJ|1|B|C|30||||4_555cWW
3OXJ|1|B|G|73||||4_5553OXJ|1|B|C|31||||4_555s55
3OXJ|1|B|G|73||||4_5553OXJ|1|B|C|74||||4_555s35
3OXJ|1|B|G|73||||4_5553OXJ|1|B|G|72||||4_555s53
3OXJ|1|B|G|73||||4_5553OXJ|1|B|G|73||||4_5550BPh
3OXJ|1|B|G|793OXJ|1|B|A|78s53
3OXJ|1|B|G|793OXJ|1|B|G|10
3OXJ|1|B|G|793OXJ|1|B|G|790BPh
3OXJ|1|B|G|793OXJ|1|B|G|80s35
3OXJ|1|B|G|79||||4_5553OXJ|1|B|A|78||||4_555s53
3OXJ|1|B|G|79||||4_5553OXJ|1|B|G|10||||4_555
3OXJ|1|B|G|79||||4_5553OXJ|1|B|G|79||||4_5550BPh
3OXJ|1|B|G|79||||4_5553OXJ|1|B|G|80||||4_555s35
3OXJ|1|B|G|7||||4_5553OXJ|1|A|A|64||||4_555tSS
3OXJ|1|B|G|7||||4_5553OXJ|1|B|A|83||||4_555s55
3OXJ|1|B|G|7||||4_5553OXJ|1|B|C|82||||4_555cWW
3OXJ|1|B|G|7||||4_5553OXJ|1|B|G|7||||4_5550BPh
3OXJ|1|B|G|7||||4_5553OXJ|1|B|G|8||||4_555s35
3OXJ|1|B|G|7||||4_5553OXJ|1|B|U|6||||4_555s53
3OXJ|1|B|G|83OXJ|1|B|A|33ntSS
3OXJ|1|B|G|83OXJ|1|B|A|81tSH3BPh
3OXJ|1|B|G|83OXJ|1|B|C|82s55
3OXJ|1|B|G|83OXJ|1|B|G|7s53
3OXJ|1|B|G|83OXJ|1|B|G|80BPh
3OXJ|1|B|G|83OXJ|1|B|G|80s33
3OXJ|1|B|G|803OXJ|1|B|A|33cSS
3OXJ|1|B|G|803OXJ|1|B|A|9tSH3BPh
3OXJ|1|B|G|803OXJ|1|B|G|79s53
3OXJ|1|B|G|803OXJ|1|B|G|8s33
3OXJ|1|B|G|803OXJ|1|B|G|800BPh
3OXJ|1|B|G|80||||4_5553OXJ|1|B|A|33||||4_555cSS
3OXJ|1|B|G|80||||4_5553OXJ|1|B|A|9||||4_555tSH3BPh
3OXJ|1|B|G|80||||4_5553OXJ|1|B|G|79||||4_555s53
3OXJ|1|B|G|80||||4_5553OXJ|1|B|G|80||||4_5550BPh
3OXJ|1|B|G|80||||4_5553OXJ|1|B|G|8||||4_555s33
3OXJ|1|B|G|843OXJ|1|A|A|41tSS
3OXJ|1|B|G|843OXJ|1|B|A|83s53
3OXJ|1|B|G|843OXJ|1|B|A|85s35
3OXJ|1|B|G|843OXJ|1|B|C|5cWW
3OXJ|1|B|G|843OXJ|1|B|G|840BPh
3OXJ|1|B|G|843OXJ|1|B|U|6s55
3OXJ|1|B|G|84||||4_5553OXJ|1|A|A|41||||4_555tSS
3OXJ|1|B|G|84||||4_5553OXJ|1|B|A|83||||4_555s53
3OXJ|1|B|G|84||||4_5553OXJ|1|B|A|85||||4_555s35
3OXJ|1|B|G|84||||4_5553OXJ|1|B|C|5||||4_555cWW
3OXJ|1|B|G|84||||4_5553OXJ|1|B|G|84||||4_5550BPh
3OXJ|1|B|G|84||||4_5553OXJ|1|B|U|6||||4_555s55
3OXJ|1|B|G|863OXJ|1|B|A|85s53
3OXJ|1|B|G|863OXJ|1|B|C|3cWW
3OXJ|1|B|G|863OXJ|1|B|G|860BPh
3OXJ|1|B|G|863OXJ|1|B|U|4s55
3OXJ|1|B|G|863OXJ|1|B|U|87s35
3OXJ|1|B|G|86||||4_5553OXJ|1|B|A|85||||4_555s53
3OXJ|1|B|G|86||||4_5553OXJ|1|B|C|3||||4_555cWW
3OXJ|1|B|G|86||||4_5553OXJ|1|B|G|86||||4_5550BPh
3OXJ|1|B|G|86||||4_5553OXJ|1|B|U|4||||4_555s55
3OXJ|1|B|G|86||||4_5553OXJ|1|B|U|87||||4_555s35
3OXJ|1|B|G|8||||4_5553OXJ|1|B|A|33||||4_555ntSS
3OXJ|1|B|G|8||||4_5553OXJ|1|B|A|81||||4_555tSH3BPh
3OXJ|1|B|G|8||||4_5553OXJ|1|B|C|82||||4_555s55
3OXJ|1|B|G|8||||4_5553OXJ|1|B|G|7||||4_555s53
3OXJ|1|B|G|8||||4_5553OXJ|1|B|G|80||||4_555s33
3OXJ|1|B|G|8||||4_5553OXJ|1|B|G|8||||4_5550BPh
3OXJ|1|B|U|183OXJ|1|B|G|17s53
3OXJ|1|B|U|183OXJ|1|B|U|180BPh
3OXJ|1|B|U|183OXJ|1|B|U|20s33
3OXJ|1|B|U|18||||4_5553OXJ|1|B|G|17||||4_555s53
3OXJ|1|B|U|18||||4_5553OXJ|1|B|U|18||||4_5550BPh
3OXJ|1|B|U|18||||4_5553OXJ|1|B|U|20||||4_555s33
3OXJ|1|B|U|193OXJ|1|B|U|19
3OXJ|1|B|U|19||||4_5553OXJ|1|B|U|19||||4_555
3OXJ|1|B|U|203OXJ|1|B|U|18s33
3OXJ|1|B|U|203OXJ|1|B|U|199BPh
3OXJ|1|B|U|203OXJ|1|B|U|200BPh
3OXJ|1|B|U|20||||4_5553OXJ|1|B|U|18||||4_555s33
3OXJ|1|B|U|20||||4_5553OXJ|1|B|U|19||||4_5559BPh
3OXJ|1|B|U|20||||4_5553OXJ|1|B|U|20||||4_5550BPh
3OXJ|1|B|U|233OXJ|1|B|C|24ns35
3OXJ|1|B|U|23||||4_5553OXJ|1|B|C|24||||4_555ns35
3OXJ|1|B|U|273OXJ|1|B|A|14cWW
3OXJ|1|B|U|273OXJ|1|B|C|28s35
3OXJ|1|B|U|273OXJ|1|B|G|26s53
3OXJ|1|B|U|273OXJ|1|B|U|270BPh
3OXJ|1|B|U|27||||4_5553OXJ|1|B|A|14||||4_555cWW
3OXJ|1|B|U|27||||4_5553OXJ|1|B|C|28||||4_555s35
3OXJ|1|B|U|27||||4_5553OXJ|1|B|G|26||||4_555s53
3OXJ|1|B|U|27||||4_5553OXJ|1|B|U|27||||4_5550BPh
3OXJ|1|B|U|43OXJ|1|B|A|85cWW
3OXJ|1|B|U|43OXJ|1|B|C|3s53
3OXJ|1|B|U|43OXJ|1|B|C|5s35
3OXJ|1|B|U|43OXJ|1|B|G|86s55
3OXJ|1|B|U|43OXJ|1|B|U|40BPh
3OXJ|1|B|U|443OXJ|1|B|A|59cWW
3OXJ|1|B|U|443OXJ|1|B|C|43s53
3OXJ|1|B|U|443OXJ|1|B|C|45s35
3OXJ|1|B|U|443OXJ|1|B|G|60s55
3OXJ|1|B|U|443OXJ|1|B|U|440BPh
3OXJ|1|B|U|44||||4_5553OXJ|1|B|A|59||||4_555cWW
3OXJ|1|B|U|44||||4_5553OXJ|1|B|C|43||||4_555s53
3OXJ|1|B|U|44||||4_5553OXJ|1|B|C|45||||4_555s35
3OXJ|1|B|U|44||||4_5553OXJ|1|B|G|60||||4_555s55
3OXJ|1|B|U|44||||4_5553OXJ|1|B|U|44||||4_5550BPh
3OXJ|1|B|U|463OXJ|1|B|A|57cWW
3OXJ|1|B|U|463OXJ|1|B|C|45s53
3OXJ|1|B|U|463OXJ|1|B|G|47s35
3OXJ|1|B|U|463OXJ|1|B|G|58s55
3OXJ|1|B|U|463OXJ|1|B|U|460BPh
3OXJ|1|B|U|46||||4_5553OXJ|1|B|A|57||||4_555cWW
3OXJ|1|B|U|46||||4_5553OXJ|1|B|C|45||||4_555s53
3OXJ|1|B|U|46||||4_5553OXJ|1|B|G|47||||4_555s35
3OXJ|1|B|U|46||||4_5553OXJ|1|B|G|58||||4_555s55
3OXJ|1|B|U|46||||4_5553OXJ|1|B|U|46||||4_5550BPh
3OXJ|1|B|U|4||||4_5553OXJ|1|B|A|85||||4_555cWW
3OXJ|1|B|U|4||||4_5553OXJ|1|B|C|3||||4_555s53
3OXJ|1|B|U|4||||4_5553OXJ|1|B|C|5||||4_555s35
3OXJ|1|B|U|4||||4_5553OXJ|1|B|G|86||||4_555s55
3OXJ|1|B|U|4||||4_5553OXJ|1|B|U|4||||4_5550BPh
3OXJ|1|B|U|63OXJ|1|A|A|40cSS
3OXJ|1|B|U|63OXJ|1|B|A|83cWW
3OXJ|1|B|U|63OXJ|1|B|C|5s53
3OXJ|1|B|U|63OXJ|1|B|G|7s35
3OXJ|1|B|U|63OXJ|1|B|G|84s55
3OXJ|1|B|U|63OXJ|1|B|U|60BPh
3OXJ|1|B|U|613OXJ|1|B|G|42cWW
3OXJ|1|B|U|613OXJ|1|B|G|60s53
3OXJ|1|B|U|613OXJ|1|B|G|62s35
3OXJ|1|B|U|613OXJ|1|B|U|610BPh
3OXJ|1|B|U|61||||4_5553OXJ|1|B|G|42||||4_555cWW
3OXJ|1|B|U|61||||4_5553OXJ|1|B|G|60||||4_555s53
3OXJ|1|B|U|61||||4_5553OXJ|1|B|G|62||||4_555s35
3OXJ|1|B|U|61||||4_5553OXJ|1|B|U|61||||4_5550BPh
3OXJ|1|B|U|673OXJ|1|B|A|37cWW
3OXJ|1|B|U|673OXJ|1|B|C|66s53
3OXJ|1|B|U|673OXJ|1|B|C|68s35
3OXJ|1|B|U|673OXJ|1|B|G|38s55
3OXJ|1|B|U|673OXJ|1|B|U|67n9BP
3OXJ|1|B|U|67||||4_5553OXJ|1|B|A|37||||4_555cWW
3OXJ|1|B|U|67||||4_5553OXJ|1|B|C|66||||4_555s53
3OXJ|1|B|U|67||||4_5553OXJ|1|B|C|68||||4_555s35
3OXJ|1|B|U|67||||4_5553OXJ|1|B|G|38||||4_555s55
3OXJ|1|B|U|67||||4_5553OXJ|1|B|U|67||||4_555n9BP
3OXJ|1|B|U|693OXJ|1|B|C|68s53n9BP
3OXJ|1|B|U|693OXJ|1|B|C|70ncSH
3OXJ|1|B|U|693OXJ|1|B|G|32s35
3OXJ|1|B|U|693OXJ|1|B|U|690BPh
3OXJ|1|B|U|69||||4_5553OXJ|1|B|C|68||||4_555s53n9BP
3OXJ|1|B|U|69||||4_5553OXJ|1|B|C|70||||4_555ncSH
3OXJ|1|B|U|69||||4_5553OXJ|1|B|G|32||||4_555s35
3OXJ|1|B|U|69||||4_5553OXJ|1|B|U|69||||4_5550BPh
3OXJ|1|B|U|6||||4_5553OXJ|1|A|A|40||||4_555cSS
3OXJ|1|B|U|6||||4_5553OXJ|1|B|A|83||||4_555cWW
3OXJ|1|B|U|6||||4_5553OXJ|1|B|C|5||||4_555s53
3OXJ|1|B|U|6||||4_5553OXJ|1|B|G|7||||4_555s35
3OXJ|1|B|U|6||||4_5553OXJ|1|B|G|84||||4_555s55
3OXJ|1|B|U|6||||4_5553OXJ|1|B|U|6||||4_5550BPh
3OXJ|1|B|U|873OXJ|1|B|G|2cWW
3OXJ|1|B|U|873OXJ|1|B|G|86s53
3OXJ|1|B|U|873OXJ|1|B|U|870BPh
3OXJ|1|B|U|87||||4_5553OXJ|1|B|G|2||||4_555cWW
3OXJ|1|B|U|87||||4_5553OXJ|1|B|G|86||||4_555s53
3OXJ|1|B|U|87||||4_5553OXJ|1|B|U|87||||4_5550BPh


Base-PairsCount (160)Relative Frequency
cWW1040.650
cWH20.013
tWH40.025
cHS20.013
tHS180.113
cSS180.113
tSS120.075
Base-PhosphateCount (324)Relative Frequency
1BPh40.012
3BPh100.031
4BPh20.006
5BPh20.006
7BPh40.012
8BPh20.006
9BPh60.019
0BPh2940.907
Base-StackingCount (192)Relative Frequency
s33180.094
s53960.500
s55780.406

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)