A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: AR0014  PDB ID: 464D 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17B_A14:U1_A0.133-0.105-0.0171.145-6.062-1.46
15B_C12:G3_A0.297-0.2760.031-1.691-8.34-5.147
11B_G8:C7_A-0.158-0.058-0.137-2.005-3.5570.537
12B_G9:C6_A-0.207-0.1690.008-2.002-10.662-1.7
13B_G10:U5_A-2.291-0.485-0.213-8.186-10.406-5.065
14B_G11:C4_A-0.283-0.149-0.141-5.181-10.8460.291
16B_IU13:A2_A0.038-0.120.0411.591-14.5912.386
19C_A2:IU13_D-0.065-0.128-0.2053.271-9.720.423
111C_C4:G11_D0.21-0.132-0.1373.096-7.799-3.039
113C_C6:G9_D0.114-0.2390.279-1.455-15.905-0.227
114C_C7:G8_D0.224-0.0740.092-0.908-4.8870.156
110C_G3:C12_D-0.1940.00.0143.913-14.3345.44
18C_U1:A14_D-0.161-0.0620.153-3.274-4.84-4.921
112C_U5:G10_D2.374-0.589-0.267.011-11.774-3.632

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.