A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Oct-2020 number of released structures: 11024
Search for released structures

NDB ID: NA1409  PDB ID: 4A3B 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11N_DA2:DT16_T-0.926-0.3830.182-11.8945.911-4.965
12N_DA3:DT15_T-1.206-0.2160.7786.60810.0110.872
13N_DG4:DC14_T-1.553-0.344-0.10733.57310.1813.324
14P_A7:BRU22_T1.6860.168-1.036-26.1181.079-19.165
17P_A10:DT19_T-0.582-0.035-0.1387.85-0.511.808
15P_G8:DC21_T1.1170.024-0.178-7.662-8.83-2.681
16P_G9:DC20_T0.1460.054-0.188-1.652-9.003-1.047

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.