A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: NA2634  PDB ID: 4BXO 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12H_DA2:DT10_I0.563-0.112-0.366-16.868-17.9772.256
15H_DA5:DT7_I-0.120.0080.386-9.468-12.0721.039
111H_DA11:DT1_I0.029-0.2250.25914.401-0.5810.461
18H_DC8:DG4_I0.192-0.316-0.183-0.165-17.0142.794
11H_DG1:DC11_I0.689-0.135-0.205-4.441-19.5242.829
14H_DG4:DC8_I-0.645-0.263-0.368-4.82-3.704-3.219
17H_DG7:DC5_I0.226-0.0610.1485.83-11.4494.598
110H_DG10:DC2_I0.046-0.332-0.391-7.8767.086-4.928
13H_DT3:DA9_I-0.1910.247-0.169-4.594-13.58-6.193
16H_DT6:DA6_I0.122-0.0580.766-12.426-11.1224.058
19H_DT9:DA3_I-0.4410.129-0.008-21.985-17.285-1.309

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.