A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: NA1615  PDB ID: 4DUY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
1481AA_4OC1402C1403:A1499A1500_AA1.5-0.9853.499-0.588-5.1643.287-0.788-2.0823.568-6.9640.79343.583
1483AA_5MC1404G1405:C1496G1497_AA-0.211-1.3092.878-4.435.64514.637-7.865-1.8032.19320.61616.17916.292
13AA_A10G11:C23U24_AA-0.559-1.4623.386-0.1657.28229.64-4.2051.0312.95413.9710.31630.503
131AA_A32A33:U551U552_AA0.413-1.1413.001-0.2325.96634.279-2.718-0.7232.76710.0270.3934.78
132AA_A33C34:G550U551_AA-0.054-1.5343.3482.9847.12435.857-3.3960.4872.98511.408-4.77936.653
141AA_A55G57:C355U368_AA5.439-0.7645.702-3.457-2.842171.221-0.378-2.7345.69-1.4251.733171.228
155AA_A109A327:U323G324_AA-1.839-0.3572.898-8.716-4.008-2.9195.586-18.227-0.89630.544-66.43-10.027
176AA_A119C240:G286U287_AA1.414-2.2633.164-2.3082.01193.461-1.589-1.0113.0991.381.58593.499
197AA_A140A141:U222U223_AA0.868-1.6023.065-1.3126.96525.714-5.054-2.1812.50515.2842.8826.657
198AA_A141G142:C221U222_AA0.357-2.2143.6319.8168.44733.244-4.9080.9122.98214.116-16.40435.611
1100AA_A143G198:C219G220_AA-3.236-3.1243.2574.4830.10938.305-4.7445.4222.8660.166-6.80338.556
1123AA_A149C150:A171A172_AA-0.416-0.5883.203-6.754-6.40726.530.322-0.7583.258-13.44514.17428.088
1125AA_A151A152:C169U170_AA0.706-2.5413.391-0.7913.61347.877-3.409-0.9313.1914.4450.97348.012
1126AA_A152C153:G168C169_AA4.249-2.0553.3423.25322.91147.145-3.757-4.6252.43626.841-3.81152.226
1116AA_A195A196:A179U180_AA1.623-0.6173.17510.039-6.48639.291-0.139-1.1693.524-9.385-14.52741.0
1117AA_A196G144:C178A179_AA1.183-4.6114.15814.88227.65698.071-3.46-0.53.24717.983-9.677101.734
181AA_A243A246:G281A282_AA4.7740.0493.7725.391-7.8266.58517.601-11.7484.343-45.586-31.40511.557
1147AA_A298G299:G566U560_AA3.739-2.8773.5260.6362.76532.18-5.686-6.6033.3454.975-1.14532.301
156AA_A327A329:C322U323_AA0.625-1.6693.29-3.3790.18440.777-2.407-1.2633.2230.2644.83940.911
157AA_A329G332:A321C322_AA2.611-1.5223.3983.7240.90174.392-1.287-2.0363.4910.744-3.07874.477
164AA_A338C339:G350G351_AA0.567-0.7753.109-4.70712.35627.442-3.682-1.9212.41724.3369.2730.406
1149AA_A383G384:C379G380_AA2.641-1.5872.9639.5529.58752.248-2.31-2.3613.05410.684-10.64553.853
1154AA_A389C390:G371U375_AA6.5350.3933.4971.713-23.94487.2310.806-4.593.433-17.086-1.22289.83
1158AA_A393G394:C366U367_AA3.43-3.4572.837-13.1322.1457.712-13.222-14.639-1.9819.67659.24915.371
1186AA_A430A431:U429A411_AA0.073-1.9513.686-9.0896.918-40.5291.873-1.0093.882-9.755-12.816-42.043
1187AA_A431A432:G410U429_AA2.7241.7982.7655.913-11.5184.6141.547-1.8952.7-8.507-4.3785.413
1188AA_A432C433:G409G410_AA0.359-0.7383.481-0.75818.14864.464-1.419-0.3573.19416.670.69666.707
1195AA_A439A440:G494U495_AA6.165-0.8462.981.221-3.24626.976-1.01-12.8143.327-6.922-2.60527.194
1196AA_A440C442:G492G494_AA1.387-0.3613.2061.65913.97662.492-0.933-1.243.10313.293-1.57863.901
1203AA_A448C449:G484U486_AA-0.371-0.742.8773.7-5.232-89.5480.618-0.1972.853.712.624-89.728
1205AA_A452A453:C479U480_AA-0.232-1.4683.209-5.347-4.48840.883-1.59-0.2483.348-6.377.58841.45
1206AA_A453C454:A478C479_AA1.525-1.1412.4577.006-1.78726.844-2.022-1.7912.825-3.763-14.75427.784
1169AA_A499G500:C545U405_AA-0.919-2.6586.87212.133-80.5765.1081.9111.1456.587-57.359-8.637100.619
1216AA_A563G567:C883U884_AA-0.297-3.436-0.213114.63-124.693-22.590.956-0.856-2.32565.48960.204-169.582
1291AA_A611C612:G628G629_AA0.595-1.383.441-1.11714.62735.151-3.931-1.0522.66123.021.75938.0
1294AA_A614C615:G625U626_AA0.577-1.3023.478.164.44736.615-2.6220.2243.3436.942-12.73737.737
1239AA_A632G633:U605G606_AA0.445-0.9523.207-5.62510.48855.272-1.569-0.7722.94211.1615.98656.44
1247AA_A640A642:U641U598_AA-2.524-0.6221.90328.73616.42219.869-1.2684.399-1.13229.701-51.97238.46
1248AA_A642C643:G597U641_AA-1.65-0.5072.301-4.2053.42641.702-0.9631.9852.4024.7885.87642.038
1254AA_A648G649:C590U591_AA-0.058-2.2073.022-2.0554.53323.32-6.62-0.4392.54811.0525.01123.838
1260AA_A655C656:G750U751_AA0.868-1.9313.1194.1941.82429.098-4.172-0.8513.0873.602-8.28329.448
1268AA_A663G664:G741G742_AA-0.421-1.7723.1042.7930.71630.447-3.4921.3163.0121.359-5.30430.58
1279AA_A675A676:G714A715_AA0.598-0.9163.477-0.2688.92340.782-2.259-0.8693.21212.6220.37941.707
1280AA_A676U677:G713G714_AA-0.055-0.8752.655-0.443.04121.74-3.2310.012.5118.0111.15921.954
1288AA_A684G685:U705A706_AA-1.268-1.0053.6060.11817.9749.84-2.3631.4343.09520.569-0.13552.785
1301AA_A722G724:A665A733_AA3.3181.0072.517-108.644139.524-34.205-1.7990.6511.93-70.643-55.009-176.975
1258AA_A753G654:C754U652_AA-1.516-3.234-2.679160.424-48.668-54.91.319-1.771-0.78725.29883.39-169.039
1233AA_A759G760:G581U582_AA5.272-2.1733.1463.96315.95631.731-5.651-8.0922.43427.033-6.71535.64
1305AA_A768G769:C810C811_AA0.051-1.6083.764-4.8778.3445.903-2.789-0.5133.41610.5556.17346.855
1313AA_A780A781:U801A802_AA-5.265-0.5313.124-5.9826.2282.729-27.38310.2744.05552.28550.2219.056
1314AA_A781A782:G800U801_AA6.129-1.43.0641.4212.35230.18-4.43-10.72.58522.557-2.59332.585
1315AA_A782C783:G799G800_AA0.945-0.5863.546-1.5049.03766.272-0.913-0.9213.4318.2261.36866.83
1330AA_A860G861:C868G869_AA0.229-1.0633.089-0.7313.55456.927-1.296-0.2773.023.7240.76657.033
1336AA_A889U891:A907A908_AA2.297-2.0680.834122.173124.018-162.0480.9881.1940.802-62.03561.112-179.078
1338AA_A892C893:U244G906_AA-3.211-1.6992.5-1.7677.19730.677-4.1095.6662.2313.363.2831.539
16AA_A914A915:U20G21_AA-0.193-0.9663.046-6.9731.81858.855-1.063-0.1353.0211.8437.06759.256
17AA_A915G916:C19U20_AA0.424-2.0083.9834.2646.79236.642-4.168-0.0053.59210.647-6.68437.48
110AA_A918A919:A16U17_AA0.162-1.3773.380.9823.3438.658-2.486-0.1223.2585.033-1.47938.808
111AA_A919U920:G15A16_AA-1.238-2.1333.445-4.1593.22727.656-5.1751.5283.3276.6748.60228.143
115AA_A923C924:G1392U1393_AA0.484-1.0612.7112.6117.5528.123-3.408-0.512.38615.154-5.24129.214
125AA_A935C936:G1379U1380_AA0.611-2.0853.194.21212.86128.628-5.874-0.4522.14524.363-7.97831.605
1366AA_A978A1319:U1315G1316_AA-1.926-3.035-3.548162.625-50.88949.384-2.086-0.835-2.333-26.278-83.976171.281
1381AA_A986G987:C1218U1219_AA1.344-1.0082.833-5.8017.6530.652-2.915-3.2592.23714.04510.6532.086
1437AA_A1123G1124:C1149U1150_AA-0.649-0.8184.20810.0436.11526.263-3.3354.0783.45912.68-20.82628.733
1442AA_A1157C1158:G1181G1178_AA-3.0055.607-3.23-16.9471.65932.5889.0816.482-1.2832.73627.94936.661
1431AA_A1179C1118:G1155G1156_AA-2.359-1.97-1.077126.328-123.665-63.1310.716-1.455-0.30262.36963.712-177.258
1386AA_A1213G993:C1045A1046_AA-0.138-4.537-2.668140.48979.95969.36-1.492-1.33-3.46741.921-73.655164.931
1353AA_A1225C1226:G954U955_AA-1.339-0.6473.042-1.4671.33245.779-0.9391.6013.0621.7111.88545.819
1356AA_A1229C1230:G951U952_AA-0.655-1.9573.134-0.8780.30826.213-4.3921.2163.1310.6791.93426.229
1363AA_A1236C1237:G1337G945_AA0.3470.3172.8224.306-0.17623.0350.8320.422.836-0.437-10.66223.429
1450AA_A1238A1239:A1299U1301_AA0.095-1.9833.527-3.7874.545-91.7891.284-0.0133.601-3.162-2.634-91.937
1451AA_A1239C1297:C1298A1299_AA0.89-4.3442.9967.0596.453-54.2584.3291.3713.322-7.0147.672-55.031
1456AA_A1245C1246:G1291U1292_AA1.012-1.6093.221.969.2235.508-3.733-1.3572.7814.799-3.14636.699
1459AA_A1248C1249:A1288A1289_AA-0.047-1.443.0990.9895.32735.997-2.9840.2012.8628.56-1.58936.389
1460AA_A1252G1253:C1284A1285_AA0.793-0.93.421.228-6.252113.2-0.465-0.463.455-3.742-0.735113.317
1367AA_A1319G1323:C1314U1315_AA3.331-1.7612.87-5.435-0.20568.007-1.564-3.1432.634-0.1834.85168.198
1369AA_A1324C1325:G1312U1313_AA0.981-1.6223.267-1.8890.38633.033-2.913-2.0373.1890.6773.31833.088
1374AA_A1329U1330:U1307U1308_AA0.454-1.5843.223-1.5593.03536.91-2.884-0.9163.0664.7812.45637.062
1377AA_A1332A1333:G1304G1305_AA-0.8120.2682.768-15.40311.88130.017-1.158-0.7432.77220.46126.52635.647
1378AA_A1333G1334:C1303G1304_AA0.472-0.7193.583-4.3779.6267.377-1.034-0.63.4338.6173.9268.104
1344AA_A1339A1340:U943G944_AA1.279-0.893.3841.0646.71461.056-1.195-1.2013.2996.587-1.04361.396
1345AA_A1340U1341:G942U943_AA1.133-1.7413.4186.145-5.01938.453-1.931-0.8763.738-7.523-9.21139.233
1470AA_A1349A1350:U1372G1373_AA0.009-0.5723.232-8.183.87766.669-0.665-0.3213.1783.5117.40767.211
1471AA_A1350U1351:G1371U1372_AA0.495-1.4593.1464.1746.59937.765-2.973-0.2682.89610.063-6.36538.535
1478AA_A1357U1358:A1363G1365_AA0.3230.4423.74617.8320.536105.251-0.040.0723.78412.784-11.099107.685
1490AA_A1460G1461:C1440G1441_AA0.256-1.0213.623-1.9562.62158.55-1.192-0.3733.5692.6771.99858.633
1498AA_A1468G1469:C1431G1432_AA1.039-1.0883.485-0.3573.38758.438-1.299-1.0833.4173.4660.36658.528
1503AA_A1473G1474:C1426U1427_AA0.343-1.3813.0296.40512.27327.359-4.6890.432.24124.091-12.57130.603
1513AA_A1483C1484:G1416G1417_AA0.262-1.163.734-10.9048.99267.382-1.401-0.6853.5018.0159.71968.677
1521AA_A1507G1508:C1527U1528_AA0.885-0.9652.6950.2739.73724.319-4.169-1.8982.16322.016-0.61826.17
1527AA_A1513C1514:G1521U1522_AA-0.51-0.9123.1760.1183.84132.211-2.2780.9333.0486.892-0.21132.433
133AA_C34G35:C549G550_AA-0.312-1.7363.202-4.6549.42932.105-4.388-0.1532.62116.5058.14633.74
135AA_C36U37:A397G548_AA-0.786-2.2512.7097.285-4.723114.892-1.2910.5312.733-2.799-4.318115.102
144AA_C63G66:C103G104_AA-2.626-1.8463.663-9.16911.6451.404-2.8912.2673.58313.11110.32853.357
146AA_C67G68:A101G102_AA-0.994-1.6733.0814.22-2.76629.288-2.5473.9982.489-5.097-26.19932.604
150AA_C73C74:G96G97_AA-0.293-1.4673.1372.08810.79830.812-4.2610.842.47219.557-3.78232.671
151AA_C74G75:U95G96_AA1.197-2.4194.4075.13322.13513.484-11.207-1.2530.47958.159-13.48726.377
153AA_C76G77:C92G93_AA0.554-1.8783.558-10.1164.63529.75-4.307-2.9132.9018.65618.8931.719
183AA_C123G124:C237G238_AA0.045-1.6523.327-3.04213.26532.695-4.532-0.492.47822.3935.13535.343
190AA_C131C132:G230G231_AA-0.545-2.173.0562.839-1.53326.465-4.3281.8823.1-3.333-6.17226.658
191AA_C132U133:U229G230_AA-0.388-1.5013.205-0.6745.20740.01-2.7360.4913.07.5710.9840.339
193AA_C136C137:G226G227_AA-0.277-2.2553.498-5.21310.38732.962-5.297-0.3092.69817.6378.85334.897
194AA_C137G138:C225G226_AA-0.721-1.9113.3-2.0815.12327.174-5.181.022.94210.7624.37127.721
1124AA_C150A151:U170A171_AA0.6980.2973.2681.9250.4547.6760.7570.8513.3513.319-14.0757.926
1127AA_C153C154:G167G168_AA0.276-1.543.552-7.56113.26638.323-3.639-1.2182.79119.311.041.146
1128AA_C154C155:G166G167_AA-0.013-2.2673.5794.0759.01727.662-6.3940.8932.69318.139-8.19729.346
1129AA_C155G156:C165G166_AA0.667-1.8453.3963.7957.50226.843-5.523-0.5032.85115.678-7.93128.106
1113AA_C193C194:G183G184_AA-0.424-1.6833.34-6.7437.29731.479-4.181-0.3762.91413.04812.05832.971
1114AA_C194G181:U182G183_AA0.219-3.593-3.707-144.526-96.203-163.3911.6430.34-3.92948.12-72.291-179.079
177AA_C240C241:G285G286_AA-0.087-2.1673.1712.1069.79129.269-5.7090.5162.3318.699-4.02330.899
178AA_C241C242:G284G285_AA-0.456-1.7063.2381.089.35932.513-4.320.9442.64416.294-1.8833.815
179AA_C242C245:C283G284_AA-0.409-1.6673.234-2.6020.91955.407-1.8440.293.2220.9882.79655.47
180AA_C245A243:A282C283_AA-2.413-1.0933.086.7081.3723.885-9.96427.362-0.72512.12-59.2347.871
1134AA_C248U249:G275G276_AA0.597-2.0093.4173.7812.93937.007-3.542-0.4183.2974.607-5.92737.304
174AA_C290C291:G309G310_AA0.893-2.23.3864.7749.55125.55-6.788-0.7762.53720.493-10.24227.657
175AA_C291G292:C308G309_AA-0.166-1.4683.6524.31912.73839.685-3.4590.7083.02818.143-6.15141.815
1146AA_C295U296:G301G302_AA0.557-1.4243.1251.9873.21139.439-2.456-0.6033.0284.744-2.93639.612
160AA_C334C335:G318G319_AA-0.374-1.6023.166-3.8593.5630.178-3.699-0.0132.9856.7737.34330.621
161AA_C335C336:G317G318_AA-0.324-1.8323.1495.0089.78231.608-4.6031.2882.41317.316-8.86633.418
162AA_C336C337:G316G317_AA0.75-2.0213.451-1.42520.69733.888-5.148-1.2571.91932.0562.20639.574
163AA_C337A338:G351G316_AA-0.341-1.8213.207-0.25411.14440.917-3.5580.4492.64615.5950.35642.346
165AA_C339U340:A349G350_AA-0.636-1.8243.191-4.3198.52425.899-5.7110.3792.54318.2479.24627.578
167AA_C341C342:G347G348_AA0.042-2.5873.455-3.9798.49827.751-6.852-0.8942.53817.118.0129.265
168AA_C342U343:G346G347_AA-1.236-0.7273.59212.6597.6396.788-0.621.0483.4065.08-8.42897.63
1151AA_C385C386:G377G378_AA1.054-1.6023.113-0.69613.90628.072-5.181-2.0652.0826.691.33531.273
1152AA_C386U387:G376G377_AA0.285-1.6133.4247.0245.29434.754-3.40.5683.1498.692-11.53235.816
1155AA_C390G391:C370G371_AA-0.466-1.3233.687-4.61119.6331.13-4.8220.0932.49332.6427.66836.954
1160AA_C395G396:U45G46_AA0.188-1.2973.2641.31921.85432.383-4.309-0.142.02934.683-2.09338.925
1162AA_C398G399:C43G44_AA-0.832-1.9573.775-7.24115.6630.51-5.7420.2382.6227.20112.57734.949
1164AA_C400C401:G41G42_AA0.794-1.4113.0166.7374.01631.507-3.175-0.3312.9227.256-12.17332.445
1165AA_C401G402:C40G41_AA0.13-1.6923.222-4.85613.31827.783-5.371-1.052.15425.7239.3831.127
1167AA_C403U404:U498G39_AA-1.61-3.8393.354-12.54415.76163.814-4.090.9942.68814.53411.56766.596
1189AA_C433U434:A408G409_AA-0.289-1.943.596-7.21915.46527.318-6.183-0.7272.21729.38813.71832.124
1191AA_C435C436:G406G407_AA0.009-1.8423.212-1.77710.06329.76-5.085-0.3152.46818.9053.33831.428
1192AA_C436U437:A496G406_AA-3.166-1.7353.375-3.707-0.15980.889-1.3322.3383.496-0.1232.85680.96
1197AA_C442C443:G491G492_AA-0.61-1.5683.3652.2878.08534.652-3.7031.3192.89313.332-3.77235.626
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1400AA_G1048G1050:C1208C1209_AA-0.901-1.7863.466-6.9582.31236.264-3.150.4193.4583.66811.0436.974
1401AA_G1050C1051:2MG1207C1208_AA-0.112-2.0683.0961.0334.61934.007-4.1590.3362.7947.85-1.75634.325
1406AA_G1057G1058:U1199C1203_AA4.2850.0282.848-4.14814.62456.521-0.61-4.5752.49315.1414.29558.366
1407AA_G1058C1059:G1198U1199_AA0.578-0.6582.9310.52313.18335.607-2.474-0.8322.54620.702-0.82137.898
1410AA_G1061U1062:U1194C1195_AA0.534-0.9883.274-3.7965.1637.087-2.185-1.3093.0468.0395.91437.617
1413AA_G1064C1066:A1191C1192_AA-2.3692.7820.741-113.188-125.912-41.573-1.021-1.5260.71765.517-58.896-170.006
1414AA_G1068C1069:G1106C1107_AA-0.027-1.7453.002-1.151.60529.32-3.752-0.1692.9033.1662.26929.385
1418AA_G1072U1073:A1102C1103_AA0.245-1.2273.2916.33211.82332.885-3.670.4852.70519.886-10.6535.445
1420AA_G1074C1075:G1082U1083_AA-0.063-1.1672.93-0.373.11639.465-2.0450.0542.8344.6060.54739.584
1424AA_G1087G1088:C1097C1098_AA0.008-1.5123.312-1.11914.32134.451-4.131-0.1512.50822.9811.79637.242
1425AA_G1088G1089:C1096C1097_AA-0.244-1.9253.317-0.4799.02837.18-4.0160.3152.79413.9080.73838.226
1426AA_G1089U1090:U1095C1096_AA0.669-1.0652.685-2.043.5636.196-2.099-1.2972.5325.7073.2736.42
1434AA_G1120U1121:A1152C1153_AA-0.715-1.6743.0642.3786.33639.494-3.0921.2872.7289.293-3.48840.047
1440AA_G1133G1134:C1140C1141_AA-0.248-2.113.384.80717.09229.766-5.8431.0621.86930.136-8.47534.556
1441AA_G1134U1135:G1138C1140_AA-1.186-1.0143.231-9.9162.653105.874-0.6690.6093.2841.666.204106.22
1439AA_G1139G1133:C1141G1142_AA-1.2643.694-1.523-165.9993.782-79.281-1.8360.195-2.01-1.948-85.512-169.263
1444AA_G1160C1161:G1175A1176_AA0.833-2.2773.21-2.559.92927.445-6.34-2.122.18520.0615.15329.262
1448AA_G1164C1165:G1171C1172_AA0.873-1.7573.3971.7825.58632.697-4.013-1.2293.1059.824-3.13433.205
1358AA_G1231U1232:A949U950_AA-0.443-1.4313.074-4.9316.61639.149-2.7880.1312.8389.7427.26239.976
1360AA_G1233C1234:G947C948_AA-1.029-1.3933.077-2.2873.20835.247-2.7251.3783.0015.2773.76235.46
1461AA_G1253C1254:G1283C1284_AA0.375-1.4173.2074.8781.91432.45-2.8250.1523.1423.397-8.65932.859
1463AA_G1258C1259:G1276C1277_AA-0.553-1.153.015-14.17810.00925.792-3.903-1.4472.40219.81928.07531.005
1368AA_G1323A1324:U1313C1314_AA-0.188-1.0983.425.91510.72633.707-3.3191.1522.87617.784-9.80835.803
1376AA_G1331A1332:G1305A1306_AA-1.448-1.5945.16-1.854-18.04-11.83113.608-4.8221.38656.846-5.841-21.626
1348AA_G1343C1344:G939C940_AA0.266-0.9182.937-0.13610.76335.099-2.727-0.4392.55417.350.21936.662
1474AA_G1353C1354:G1368C1369_AA-0.173-1.853.626-4.731-5.88940.957-1.887-0.3323.84-8.336.69341.618
1476AA_G1355G1356:C1366C1367_AA0.092-1.4353.6241.4147.79436.596-3.3290.0543.26212.237-2.22137.414
1477AA_G1356A1357:G1365C1366_AA-1.318-1.173.194.487-3.3636.101-1.4182.7023.102-5.381-7.18736.52
1480AA_G14014OC1402:A1500C1501_AA1.253-1.6923.5277.8616.30342.254-2.949-0.8723.4218.598-10.72243.385
1484AA_G1405U1406:U1495C1496_AA-0.659-1.6063.186-4.09912.55727.15-5.3590.5272.30824.968.14730.139
1486AA_G1453G1454:C1449U1450_AA-1.119-3.6880.436111.921-112.06560.922-1.4171.0181.784-59.769-59.692161.395
1487AA_G1454G1455:C1448C1449_AA-0.294-1.9093.5164.00110.24232.674-4.7971.1112.75717.595-6.87434.427
1488AA_G1455C1459:G1447C1448_AA0.224-1.9683.219-1.9123.36636.945-3.519-0.5963.0195.2943.00737.14
1491AA_G1461G1462:C1439C1440_AA-0.062-1.5843.581.4559.14834.839-3.9070.3143.07414.954-2.37836.013
1492AA_G1462C1463:G1438C1439_AA0.023-1.1873.145-1.833.84633.761-2.606-0.3142.9916.5893.13634.021
1494AA_G1464C1465:U1436C1437_AA-1.84-1.5453.3820.49910.19534.182-3.9543.0772.79416.884-0.82635.63
1497AA_G1467A1468:G1432A1434_AA1.564-0.7175.248-11.06317.6754.3-11.103-9.969-0.34266.5241.63521.286
1499AA_G1469G1470:C1430C1431_AA0.483-1.8213.4880.5717.53928.789-5.124-0.8222.93614.842-1.12429.745
1500AA_G1470G1471:C1429C1430_AA0.025-1.6663.4180.8917.3236.018-3.6390.0823.03311.688-1.42236.741
1501AA_G1471U1472:A1428C1429_AA-0.365-1.3593.023-0.3977.82330.437-3.7950.6082.60614.5990.74131.405
1504AA_G1474G1475:U1425C1426_AA-0.351-1.5732.921-2.45410.75527.711-4.8830.2672.19421.4124.88529.786
1505AA_G1475G1476:C1424U1425_AA-0.569-1.6932.921-3.8486.50427.977-4.6030.4172.52613.1517.78128.96
1506AA_G1476C1477:G1423C1424_AA0.363-1.9693.2623.704-1.23926.288-3.9520.2043.367-2.706-8.08726.571
1510AA_G1480U1481:G1419C1420_AA0.8380.1642.563-2.0548.22744.223-0.366-1.2412.51410.812.69944.988
1512AA_G1482A1483:G1417A1418_AA0.007-1.3843.3452.7294.691-25.6541.7070.7973.517-10.4166.061-26.212
1516AA_G1486G1487:A1413U1414_AA-0.053-1.8292.9175.599-0.31325.947-3.911.4352.863-0.688-12.28726.536
1517AA_G1487G1488:C1412A1413_AA0.985-1.5363.47-5.2243.99230.757-3.588-2.8043.0467.4219.71131.435
1518AA_G1488G1489:C1411C1412_AA-0.849-1.353.5680.4263.89435.561-2.7971.4473.3966.351-0.69635.769
1519AA_G1489C1490:G1410C1411_AA0.362-1.6372.986-2.977-1.74922.18-3.608-1.9493.03-4.5117.67722.444
1522AA_G1508C1509:G1526C1527_AA0.495-1.3773.1841.1167.77536.418-3.122-0.6372.85312.266-1.7637.227
1525AA_G1511U1512:G1523C1524_AA0.591-1.0523.1823.21814.39740.033-2.802-0.5122.70320.217-4.51942.559
15AA_U12A914:G21G22_AA-1.366-3.6312.917-9.1535.3926.347-21.982-2.3720.92830.06351.03312.37
130AA_U30A32:U552A553_AA-0.76-0.9163.422.28715.33731.246-3.8231.6122.63826.526-3.95634.796
136AA_U49G361:C47U365_AA1.8273.7080.65699.427-146.825140.0161.896-0.885-0.082-73.479-49.759179.085
143AA_U62C63:G104G105_AA-0.339-2.0712.8142.96510.20820.794-7.6041.5591.57326.19-7.60623.327
171AA_U114G115:C312A313_AA-0.46-1.143.0291.1856.29639.437-2.320.7962.8079.255-1.74139.933
185AA_U125G126:C235G236_AA0.616-1.5923.2679.83819.74329.387-4.9650.231.96133.599-16.74236.598
189AA_U129C131:G231G232_AA-0.38-2.0863.2090.4822.68538.52-3.4720.6313.0574.064-0.7338.612
192AA_U133C136:G227U229_AA-2.746-0.2346.9566.19215.30372.513-1.2042.6876.58712.776-5.1774.117
1108AA_U190JG190K:C188G189_AA-0.525-1.752.9631.2428.71524.072-5.9511.472.17620.058-2.85925.608
1110AA_U190LG191:C186C187_AA1.244-1.53.157-5.2513.61232.913-4.091-2.6582.17122.6888.75135.919
1112AA_U192C193:G184A185_AA0.666-1.5333.4513.3339.76438.732-3.369-0.5883.03714.413-4.9240.031
1135AA_U249U252:A274G275_AA2.287-0.5026.46522.141-98.97621.0894.071-0.4792.473-79.519-17.788102.996
1136AA_U252U253:A273A274_AA-0.789-1.4213.38-7.54225.31936.427-4.0390.3892.12835.36910.53544.734
1137AA_U253G254:C272A273_AA-0.153-1.7533.562-0.5938.56731.755-4.5960.1663.00215.311.05932.867
1140AA_U256G257:C269A270_AA0.799-0.9782.992-3.2088.35635.184-2.59-1.6742.61913.5545.20336.27
1145AA_U294C295:G302A303_AA-0.774-1.4563.447-4.4678.41632.032-3.9510.5953.05514.8467.8833.383
166AA_U340C341:G348A349_AA-0.495-1.7143.376-0.2911.2839.239-2.7080.7013.3241.9060.43339.26
139AA_U358G357:C54A53_AA1.3322.39-2.8818.477-3.219-21.082-7.0460.628-2.8078.3221.907-22.929
138AA_U359U358:A53G52_AA0.1911.57-3.1624.452-2.283-37.895-2.673-0.244-3.0683.4976.819-38.212
1153AA_U387A389:U375G376_AA-1.497-1.1633.4813.08311.79635.466-3.3492.7342.82918.694-4.88637.44
1168AA_U404A499:U405U498_AA-0.23-2.012.1291.0432.80229.261-4.3330.5921.9235.529-2.05829.41
1184AA_U427G428:A415G416_AA3.132-1.487-0.94-64.453-158.168-2.4660.2211.785-0.21583.254-33.926-170.798
1190AA_U434C435:G407A408_AA0.345-0.9423.1681.8017.42841.028-2.064-0.3042.97310.488-2.54241.704
1193AA_U437G438:A497A496_AA1.175-1.0042.8458.953-2.9849.519-1.0344.7763.03-14.18-42.54813.396
1176AA_U512C513:G538A539_AA-0.367-1.1173.392-1.35510.0530.492-3.8020.4232.918.4772.49132.096
1243AA_U636G637:C601A602_AA-0.638-1.3383.4181.56413.84332.482-4.1861.2762.61723.448-2.64935.269
1252AA_U646C647:G592G593_AA0.467-1.8073.099-1.9757.03929.664-4.664-1.2322.57613.4923.78630.532
1264AA_U659G660:C745A746_AA0.006-1.23.395-0.62910.00135.725-3.217-0.0942.96415.9191.00237.059
1273AA_U669G670:C736A737_AA0.527-1.4192.762-2.002-0.85229.336-2.641-1.42.76-1.683.94629.415
1276AA_U672G673:C717G734_AA-1.288-1.83.4621.318.80626.107-5.8493.0132.65818.81-2.79927.558
1281AA_U677U678:A712G713_AA0.402-1.263.693-7.06512.98137.743-3.37-1.4242.99919.19110.44540.435
1282AA_U678C679:G711A712_AA0.597-1.4473.0480.2385.76735.947-3.038-0.9262.7949.27-0.38336.392
1290AA_U686A687:G703A704_AA5.4190.7143.6659.162-12.849-14.1452.21117.7180.55439.39328.089-21.163
1231AA_U757G758:A583G584_AA-0.078-0.9083.3886.6215.78550.427-1.4610.5583.2386.731-7.70351.139
1309AA_U772G773:C806A807_AA0.574-1.6622.7581.74811.88528.938-4.773-0.8161.96922.593-3.32231.283
1227AA_U820G570:C866A873_AA-3.33-2.8850.5929.681-170.953-3.2440.433-1.727-2.67489.7325.081-171.231
1321AA_U850G851:U835G836_AA0.25-2.9772.735-2.27913.93913.669-11.797-1.235-0.22445.5467.44719.631
1337AA_U891A892:G906A907_AA5.006-0.8663.5260.1919.003-11.923-5.40819.453.275-37.1620.789-14.931
112AA_U920U921:A1396G15_AA0.597-1.5123.2426.45710.01526.495-5.0780.1352.58520.58-13.26929.008
113AA_U921G922:C1395A1396_AA1.197-1.6033.4686.05923.57530.26-5.153-1.1061.96438.321-9.84938.656
1352AA_U960A1225:U955U956_AA-3.218-2.539-0.56878.97-150.868-5.990.703-1.914-0.78679.51241.619-170.3
1364AA_U961C962:G973A1201_AA1.821-4.4583.516-0.305-3.769-22.90912.3394.4242.7799.406-0.76-23.215
1388AA_U997G998:C1043A1044_AA0.698-2.0383.4036.0114.95124.774-6.876-0.2171.99131.009-12.46529.485
1391AA_U1000G1002:C1039A1041_AA0.856-3.3075.783-1.07919.61757.509-4.834-0.9354.52819.7661.08760.5
1403AA_U1052C1200:U1205G1206_AA1.337-1.756-2.067-143.28-104.41881.77-1.343-0.031-1.388-52.48572.018177.952
1405AA_U1056G1057:C1203A1204_AA-1.169-2.1043.9676.9222.54832.118-4.2133.4213.4734.531-12.3132.933
1411AA_U1062C1063:G1193U1194_AA0.065-1.0743.429.5823.82423.702-3.4992.5983.0118.795-22.03925.821
1416AA_U1070C1071:G1104A1105_AA-0.52-1.9413.447-2.767-0.67531.593-3.4190.4093.519-1.2365.06931.718
1419AA_U1073G1074:U1083A1102_AA1.724-1.3753.099-3.69511.41141.971-2.813-2.6332.50715.5535.03743.577
1423AA_U1086G1087:C1098G1099_AA0.293-2.2463.991-11.193.95139.685-3.68-1.8293.5545.66816.05341.353
1435AA_U1121U1122:A1151A1152_AA0.797-1.1343.605-0.53612.19231.48-4.018-1.4652.96121.4880.94533.707
1436AA_U1122A1123:U1150A1151_AA0.771-1.4542.603-8.27626.82127.221-4.145-1.7630.69544.65113.77838.91
1359AA_U1232G1233:C948A949_AA1.232-1.9243.5612.6146.42829.902-4.958-1.7913.18212.25-4.98330.678
1362AA_U1235A1236:G945A946_AA0.481-2.672.96714.6-1.63333.963-4.0051.1343.036-2.647-23.66836.918
1458AA_U1247A1248:A1289G1290_AA-5.504-3.7073.19313.70310.6642.643-5.317.7740.5913.986-17.97845.888
1375AA_U1330G1331:A1306U1307_AA0.502-0.1632.80212.18513.82346.811-1.0650.1762.716.662-14.68850.117
1346AA_U1341C1342:G941G942_AA-1.338-2.6163.8273.4644.317.204-10.8776.3122.77413.917-11.2118.062
1351AA_U1345A1346:A1375U1376_AA-2.4043.778-3.07810.541-5.493-34.971-6.534-4.876-1.7138.83116.947-36.876
1469AA_U1348A1349:G1373A1374_AA5.405-0.9663.6541.5660.139-11.6934.5128.4182.918-0.6797.64-11.798
1472AA_U1351C1352:G1370G1371_AA0.385-2.4513.24111.2757.40226.163-6.2951.4692.43115.138-23.05929.381
1485AA_U14065MC1407:G1494U1495_AA1.05-1.5613.5483.8736.65844.757-2.651-0.9953.3698.668-5.04245.381
1502AA_U1472A1473:U1427A1428_AA0.993-1.3543.0540.1414.60934.88-3.714-1.522.32723.156-0.22337.728
1511AA_U1481G1482:A1418G1419_AA-2.6-0.9973.266.2278.67646.68-1.8673.6642.69610.784-7.7447.819
1515AA_U1485G1486:U1414G1415_AA0.437-2.1073.4280.0048.69824.06-7.084-0.9862.52320.046-0.00925.562
1524AA_U1510G1511:C1524G1525_AA-1.194-0.7343.138-6.04917.97826.921-4.1891.142.40633.80411.37332.831
1526AA_U1512A1513:U1522G1523_AA0.367-1.8393.0464.96414.54723.522-6.5080.1671.68731.711-10.8228.04

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.