A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: NA1640  PDB ID: 4DWI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14B_DA6:DT7_C-0.069-0.122-0.413-10.9732.3822.968
18B_DA10:DT3_C-0.07-0.288-0.0098.115-3.808-1.064
16B_DC8:DG5_C0.46-0.042-0.2093.288-16.671.166
17B_DC9:DG4_C0.097-0.1460.096-9.249-11.9091.749
12B_DG4:DC9_C-0.05-0.0740.228-7.451-8.490.13
13B_DG5:DC8_C-0.209-0.095-0.182-13.347-16.1661.718
11B_DT3:DA10_C-0.15-0.0840.182-22.836-0.9675.461
15B_DT7:DA6_C0.071-0.197-0.3814.331-10.928-1.429

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.