A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: NA1710  PDB ID: 4ED0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13T_DA8:DT5_P0.09-0.0720.174.626-3.750.929
14T_DC9:DG4_P0.311-0.118-0.27811.055-7.3280.94
16T_DC11:DG2_P0.141-0.090.201-5.985-2.8840.253
12T_DG7:DC6_P-0.07-0.124-0.235-6.313-2.862-1.399
15T_DG10:DC3_P-0.477-0.192-0.173-5.749-7.8964.357
11T_DT6:DA7_P0.109-0.0370.216-1.718-15.0093.957
17T_DT12:DA1_P-0.149-0.123-0.13515.95-2.0474.466

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.