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As of 25-May-2022 number of released structures: 12098
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NDB ID:
NA1813
PDB ID:
4FF2
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
2
C_DA11:DT21_C
0.058
-0.066
-0.275
-13.607
-13.17
2.411
1
3
C_DA12:DT20_C
-0.124
-0.114
0.114
0.848
-0.504
8.299
1
5
C_DC14:DG18_C
0.206
-0.049
-0.341
18.508
7.729
-0.092
1
1
C_DG10:DC22_C
-0.192
0.014
-0.185
-11.441
-2.618
2.879
1
4
C_DG13:DC19_C
-0.155
-0.081
-0.132
-3.0
-5.245
-1.29
1
6
C_DG15:DA17_C
6.334
-4.115
1.42
38.307
-6.533
22.962
1
8
D_DA11:DT21_D
0.024
-0.225
-0.315
-8.968
-13.24
0.804
1
9
D_DA12:DT20_D
0.391
-0.118
-0.098
0.028
-10.296
12.871
1
11
D_DC14:DG18_D
0.043
-0.174
-0.687
18.909
10.674
-0.239
1
7
D_DG10:DC22_D
-0.277
-0.083
-0.268
-9.81
1.079
-2.475
1
10
D_DG13:DC19_D
-0.348
-0.118
0.593
5.208
2.569
-1.984
1
12
D_DG15:DA17_D
6.421
-4.093
1.664
38.256
-8.036
23.357
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.