A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA1892  PDB ID: 4FS1 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_DA7:DT847_C-0.172-0.0830.1536.751-8.1345.682
14B_DA10:DT844_C0.179-0.2220.1056.309-11.5541.353
15B_DC11:DG843_C-0.172-0.108-0.13911.152-12.333.472
16B_DC12:DG842_C0.196-0.1190.0176.167-16.478-3.477
12B_DG8:DC846_C-0.209-0.227-0.0244.21-9.303-4.336
13B_DG9:DC845_C0.307-0.144-0.1340.607-3.54-2.684
17B_DOC13:DG841_C0.133-0.14-0.1811.6390.6791.514

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.