4FS1: Base Pair Morphology Parameters

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As of 24-May-2023 number of released structures: 12803

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NDB ID: NA1892 PDB ID: 4FS1

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	1	B_DA7:DT847_C	-0.172	-0.083	0.153	6.751	-8.134	5.682
1	4	B_DA10:DT844_C	0.179	-0.222	0.105	6.309	-11.554	1.353
1	5	B_DC11:DG843_C	-0.172	-0.108	-0.139	11.152	-12.33	3.472
1	6	B_DC12:DG842_C	0.196	-0.119	0.017	6.167	-16.478	-3.477
1	2	B_DG8:DC846_C	-0.209	-0.227	-0.024	4.21	-9.303	-4.336
1	3	B_DG9:DC845_C	0.307	-0.144	-0.134	0.607	-3.54	-2.684
1	7	B_DOC13:DG841_C	0.133	-0.14	-0.181	1.639	0.679	1.514

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.