A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 16-Oct-2019 number of released structures: 10422
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NDB ID: NA2388  PDB ID: 4KFC 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12Y_DA2:DT29_Z120
18Y_DA8:DT23_Z120
110Y_DA10:DT21_Z120
119Y_DA19:DT12_Z120
121Y_DA21:DT10_Z00
11Y_DC1:DG30_Z119
111Y_DC11:DG20_Z119
120Y_DC20:DG11_Z00
122Y_DC22:DG9_Z119
123Y_DC23:DG8_Z10
124Y_DC24:DG7_Z00
125Y_DC25:DG6_Z119
127Y_DC27:DG4_Z00
128Y_DC28:DG3_Z10
129Y_DC29:DG2_Z10
126Y_DG26:DC5_Z119
130Y_DG30:DC1_Z00
13Y_DT3:DA28_Z120
14Y_DT4:DA27_Z120
15Y_DT5:DA26_Z120
16Y_DT6:DA25_Z120
17Y_DT7:DA24_Z120
19Y_DT9:DA22_Z120
112Y_DT12:DA19_Z120
113Y_DT13:DA18_Z120
114Y_DT14:DA17_Z120
115Y_DT15:DA16_Z00
116Y_DT16:DA15_Z10
117Y_DT17:DA14_Z120
118Y_DT18:DA13_Z120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)