A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Oct-2021 number of released structures: 11724
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NDB ID: NA2500  PDB ID: 4KZX 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
140ii_A39A40:U504G505_ii-0.29-0.8293.682-5.82910.03457.609-1.425-0.043.51810.2975.98258.668
141ii_A40A476:G503U504_ii0.701-0.8664.001-4.5565.36173.112-0.932-0.7633.8964.493.81673.403
152ii_A45G47:C469G470_ii-2.988-2.7192.18979.622-126.522111.118-0.8081.8682.217-65.444-41.185162.885
156ii_A50G52:C465U478_ii5.578-0.4565.852-10.91811.417178.805-0.231-2.7925.8465.7095.459178.817
161ii_A64G66:G82A83_ii2.376-0.4573.5183.754-1.50311.1530.193-5.4924.116-7.421-18.53511.861
163ii_A92A437:U433G434_ii-2.030.2423.278-3.70810.702-2.69-12.854-14.049-0.11-72.459-25.104-11.64
181ii_A102C347:G395U396_ii1.945-2.0893.07-4.166-2.56793.402-1.389-1.4073.045-1.7632.86193.5
180ii_A104A102:U396C346_ii5.1320.012-3.698-79.85875.698166.0590.139-2.431-4.0537.98640.074172.021
187ii_A107G108:C343U344_ii0.243-0.6563.212-2.2738.16935.13-2.165-0.72.96913.2953.736.107
191ii_A111U115:A338C340_ii-2.374-0.8145.78516.7416.39382.369-0.8692.4565.2564.804-12.57983.954
1104ii_A147U148:A170A171_ii-0.869-0.9083.628-19.721-2.85334.503-0.938-1.4773.651-4.38730.32439.691
1106ii_A149A150:C168U169_ii-0.725-2.0473.545-3.5880.27655.798-2.20.5493.5730.2953.8355.904
1107ii_A150C151:G167C168_ii3.58-3.3983.5354.22627.57845.287-5.367-3.7881.65232.452-4.97352.804
1119ii_A190C191:G204G205_ii3.326-1.5333.54729.78-26.20447.1480.388-1.1224.954-27.776-31.56660.877
1126ii_A218U219:A290U291_ii-0.234-1.9463.2830.4026.35931.001-4.680.52.83511.742-0.74331.634
1129ii_A221G222:U287A288_ii-0.475-0.2263.469-2.09226.00545.96-2.0670.3912.97430.5872.46152.497
1155ii_A309G310:C321G322_ii-0.764-3.2094.43913.639-7.66433.171-3.6083.8934.414-12.59-22.40636.582
1160ii_A354C355:G385U386_ii-0.429-1.9953.187-1.5366.74529.679-5.0260.5382.69712.9472.94830.457
1163ii_A361U362:A382U383_ii-0.98-1.5873.4892.1716.93944.186-3.3371.3972.69321.585-2.76547.217
1168ii_A366G367:C377U378_ii0.325-1.4683.1413.2219.02227.804-4.635-0.022.56918.107-6.46529.377
1172ii_A404A405:U412U413_ii-0.302-1.6522.991-1.2712.40529.561-3.6780.352.8614.7012.48429.683
1173ii_A405U406:G411U412_ii0.255-1.6143.4612.1568.65143.144-2.981-0.1343.10511.616-2.89644.013
164ii_A437A439:C432U433_ii-0.371-1.1963.208-10.5443.43538.021-2.164-0.6683.0845.14115.77939.548
165ii_A439G442:C431C432_ii3.3-1.3843.351-11.122-13.76764.609-0.718-3.4363.02-12.63410.20766.735
169ii_A445C446:G427G428_ii-0.911.3352.7735.1374.094-8.991-12.0591.8012.17-22.5728.315-11.131
172ii_A448C449:G460G461_ii1.551-1.6033.021.8596.06630.171-4.069-2.5962.74111.494-3.52230.816
142ii_A476U477:A502G503_ii-3.234-3.3112.57223.8452.16716.74-6.697.643-1.3835.026-55.30429.145
144ii_A479C480:G500U501_ii-1.119-2.4063.446-0.1533.94435.82-4.4581.7883.1776.3880.24836.03
159ii_A490G62:C86U87_ii-3.348-2.0462.3929.604-2.44554.087-2.1224.011.901-2.663-10.46254.92
11ii_A506G634:C30U31_ii1.478-2.6733.243-16.096-2.18475.677-2.083-1.6322.993-1.76112.97777.145
1177ii_A513U514:A584A633_ii-1.978-2.6682.8821.9455.854-178.8651.333-0.9892.884-2.9270.973-178.866
1178ii_A516C517:G548G549_ii0.344-1.5712.965-3.2114.02825.547-4.437-1.5212.6288.9937.16926.053
1180ii_A518A519:A545U547_ii1.028-2.4143.727-10.3461.2423.606-5.779-5.3712.8972.8623.85625.773
1181ii_A519A521:U543A545_ii1.113-0.7076.104-15.33724.41766.115-2.129-1.915.27521.36813.42271.469
1182ii_A521C522:G542U543_ii-0.342-0.4212.999-5.34310.24137.008-1.778-0.082.8115.6728.17638.708
1184ii_A523G524:C540U541_ii0.833-0.6453.6541.61711.41924.878-4.431-1.3263.10924.87-3.52227.383
1187ii_A526C527:G536G537_ii1.904-2.4994.0720.33214.54672.88-2.615-1.5673.59912.126-0.27774.12
1193ii_A554G555:C575G576_ii0.853-0.9244.27-6.26312.61763.644-1.531-1.1273.95511.8125.86365.024
1200ii_A589G596:C626U627_ii-0.4112.81-0.402166.444-15.27621.0551.37-0.263-0.729-8.118-88.449167.361
1207ii_A606G607:C614G615_ii1.211-1.0922.9333.50416.54548.042-2.276-1.2012.5319.627-4.15750.764
16ii_A638U639:A25U26_ii0.76-0.9053.232-13.1891.73328.199-1.997-3.772.573.33325.36231.122
18ii_A640U641:G23C24_ii0.985-0.5533.507-5.09325.28439.174-2.868-1.6822.57933.6566.7846.622
111ii_A643C4:G20U21_ii-2.723-1.8525.27227.7493.87451.47-2.1984.8943.3864.132-29.59558.142
1213ii_A654G655:C1158C1159_ii0.132-1.643.6140.35411.63533.297-4.485-0.1642.89819.576-0.59635.219
1215ii_A661G1085:U1156U1157_ii-0.35-2.8843.00210.1584.84410.472-13.5277.0480.91220.312-42.59815.361
1275ii_A798C799:G856U859_ii3.471-1.0224.092-22.8012.69653.945-1.199-4.8332.5122.83323.95458.289
1282ii_A812G813:A843U844_ii-0.35-0.723.604-3.7812.00167.653-0.730.1553.5971.7953.39367.772
1284ii_A826G827:C839U840_ii0.271-3.306-4.139139.698-103.955-125.6861.018-0.718-4.68352.1770.108-177.323
1148ii_A899A900:U878U879_ii-1.019-4.116-1.198119.668-117.958138.044-2.160.409-0.348-59.256-60.115175.722
1149ii_A900C901:G877U878_ii-0.244-2.0883.37-3.5377.14732.289-4.808-0.1452.86512.6126.24233.234
1236ii_A918G919:C1015U1018_ii2.837-1.753.646-4.466-0.15740.766-2.48-4.5723.337-0.2256.38941.0
1250ii_A934U935:U999U1000_ii0.768-1.0163.0755.617-2.06645.051-1.14-0.5173.185-2.682-7.29245.426
1256ii_A940U941:A977G978_ii-0.351-0.8583.344-5.9343.10934.87-1.872-0.3123.2725.139.79135.488
1290ii_A953G955:A960U962_ii-1.06-0.7615.9869.0918.08106.633-0.8940.8685.78511.209-5.635107.955
1291ii_A986A988:G929A997_ii-0.4953.8441.982-144.209-88.21696.9882.165-0.1430.441-44.82373.272172.75
1292ii_A988G989:C996G929_ii-1.465-0.523.905-16.062.135-19.6480.536-8.1822.156-5.25-39.486-25.415
1223ii_A1019A1020:U671U672_ii-1.656-2.0423.507-5.15611.98738.905-4.2521.7942.96417.4127.48940.955
1224ii_A1020U1021:G670U671_ii-0.001-1.4133.087-1.366.32737.352-2.913-0.1572.8179.7892.10437.888
1227ii_A1023A1024:G667U668_ii6.418-1.3752.99-1.4517.66135.972-3.049-10.3362.40512.2282.31736.78
1228ii_A1024G1025:C666G667_ii0.064-1.1734.037-6.44717.95265.32-1.875-0.3533.62716.2755.84567.751
1230ii_A1026A1027:C664U665_ii-0.515-1.8912.538-11.027-1.89525.818-3.525-1.092.659-4.00923.33228.1
1231ii_A1027C1028:G663C664_ii-0.063-1.7343.318-1.8644.41942.014-2.852-0.1023.1286.1392.5942.275
1295ii_A1032G1033:C1074C1075_ii-0.5-0.7073.3851.1787.10254.477-1.1990.6143.2657.72-1.2854.915
1304ii_A1046G1047:C1063G1064_ii-0.369-1.0493.321-8.5020.23155.408-1.131-0.1053.3360.2469.08456.005
1306ii_A1048C1049:G1061U1062_ii0.464-1.9223.4226.2571.62434.553-3.4370.2093.3612.705-10.42135.135
1309ii_A1051U1052:A1058C1059_ii-0.305-1.5923.079-3.7512.53238.207-3.5480.0722.47618.4965.53540.305
1219ii_A1089C1090:G1147U1148_ii0.082-1.4683.6331.1075.91143.599-2.5630.0043.4167.913-1.48243.992
1311ii_A1118C1119:G1106U1107_ii1.238-2.4183.551-4.7077.935.899-4.855-2.5742.79612.5647.48737.02
1322ii_A1129G1130:C1094G1095_ii0.844-1.8812.978-5.9615.28131.471-4.148-2.3922.4429.54510.77532.438
1333ii_A1166U1168:A1184A1185_ii1.667-3.131.193121.079123.613-46.2170.9431.4471.452-63.31762.019-173.592
1335ii_A1169U1170:G1183U351_ii5.410.6121.93718.39-9.7189.5596.686-3.9114.895-30.64-57.98422.869
116ii_A1191A1192:U15G16_ii-1.73-1.373.21-13.5351.85749.294-1.7251.0253.4912.17915.87851.038
117ii_A1192G1193:C14U15_ii1.56-1.9163.6261.083-0.95444.288-2.441-1.9553.699-1.265-1.43744.31
120ii_A1195A1196:A11U12_ii-0.184-1.033.3760.0126.2940.583-2.1590.2633.1889.004-0.01741.047
121ii_A1196U1197:G10A11_ii-0.79-1.6843.303-5.1716.1531.322-4.0960.523.01511.1629.38532.311
125ii_A1200C1201:G1688U1689_ii0.584-1.243.3680.6097.49738.606-2.732-0.7953.09211.209-0.9139.304
128ii_A1204A1205:U1685U1686_ii-0.54-1.7953.287-4.3177.85636.055-3.8270.2952.8912.4566.84637.117
129ii_A1205G1206:C1684U1685_ii0.427-2.1513.1342.6583.79126.648-5.486-0.2922.8358.146-5.71227.04
134ii_A1210A1213:U1676U1680_ii4.9650.2643.657-17.462-14.32126.7010.267-2.913.247-7.9859.737127.811
135ii_A1213C1214:G1675U1676_ii-0.506-1.5343.384-0.449-0.91735.757-2.360.7563.427-1.4930.73135.771
1367ii_A1272C1273:G1316G1317_ii0.712-1.2053.848-5.1142.27264.83-1.231-0.913.7492.1154.76165.045
1369ii_A1274C1275:G1314U1315_ii-0.027-1.4343.0692.1458.14429.72-4.090.4182.58615.49-4.0830.864
1372ii_A1283U1284:C1307U1310_ii6.028-0.682.08110.26725.34672.312-1.087-4.6432.48320.769-8.41476.645
1376ii_A1287G1298:U1303U1304_ii-1.652.1490.583108.57119.377-85.15-1.184-0.7380.046-61.89656.292-166.304
1378ii_A1289G1290:C1301U1302_ii0.536-0.9133.005-8.825.92730.169-2.596-2.3682.53210.96816.32231.945
1386ii_A1328U1329:A1494U1495_ii0.542-1.4743.076-0.30110.83739.846-3.126-0.7992.60115.5550.43341.236
1404ii_A1349G1350:A1353U1354_ii-4.605-1.6693.0184.47718.95359.39-2.3194.6232.1318.594-4.39262.224
1413ii_A1392G1394:A1444G1445_ii-2.4774.8352.529-126.87397.679-58.119-2.354-1.134-3.036-51.936-67.458-162.642
1417ii_A1397A1398:U1440U1441_ii-0.649-1.1743.0192.3699.26332.464-3.321.4482.54516.137-4.12733.806
1418ii_A1398A1401:U1437U1440_ii0.592.0563.8196.794-0.22295.6711.39-0.2593.842-0.15-4.57895.853
1419ii_A1401G1402:C1436U1437_ii0.705-1.0352.911-1.8395.38330.147-2.865-1.6422.64410.2353.49730.667
1425ii_A1410C1411:G1427U1428_ii0.257-1.7153.383-7.4157.32233.609-3.906-1.5042.8412.312.45635.143
1430ii_A1417G1418:G1421U1422_ii-3.03-2.262.927-3.6856.0369.506-2.1662.532.8845.2753.22469.82
1432ii_A1451G1452:C1466C1467_ii0.48-1.8863.5315.2719.07139.163-3.5320.9433.01912.765-21.49142.859
1359ii_A1526C1527:G1633G1223_ii0.5960.2782.9682.8860.51816.2270.641-0.2453.0341.816-10.11816.488
1438ii_A1528G1531:C1592G1595_ii0.1552.1026.6897.633-72.662107.3272.1671.3575.009-39.29-52.792146.452
1440ii_A1532C1533:U1590U1591_ii-0.738-1.8573.962-1.15517.05443.797-3.9180.8213.09221.8961.48346.861
1451ii_A1556C1557:G1568C1569_ii1.113-2.3613.353-6.43-2.04946.127-2.811-1.9563.274-2.5998.15646.591
1459ii_A1602U1603:U1626G1627_ii-1.386-0.2252.828-12.41915.58840.969-1.5610.7852.85520.85116.61245.371
1466ii_A1609U1611:U1619U1620_ii-0.466-3.1785.2075.6756.003100.094-2.2150.4415.0393.911-3.697100.344
1341ii_A1635A1636:U1221G1222_ii1.811-1.2194.1596.81721.61956.078-2.55-1.3873.68822.024-6.94560.14
1342ii_A1636U1637:G1220U1221_ii0.26-1.2883.145-1.2583.14141.835-2.107-0.4863.0364.391.75841.966
1468ii_A1645A1646:U1668G1669_ii0.023-1.2783.0262.6017.94857.195-1.7070.1012.8398.254-2.70157.752
1469ii_A1646G1647:U1667U1668_ii0.05-1.8463.6544.30214.21933.281-4.9620.5262.65823.428-7.08836.36
1484ii_A1707C1708:G1814U1815_ii-0.482-1.5323.1541.8920.00435.62-2.5021.053.1250.006-3.09135.669
1487ii_A1710C1711:G1811A1812_ii-0.162-1.0073.236-7.357-0.17539.601-1.443-0.5943.219-0.25510.74640.252
1491ii_A1714U1715:A1807G1808_ii1.59-0.5723.449-4.92425.02859.03-1.649-1.7212.89724.2124.76463.846
1495ii_A1719U1720:A1803U1804_ii-0.026-1.163.256-4.7325.6136.476-2.545-0.5713.0318.8537.46837.182
1502ii_A1726G1727:C1796U1797_ii0.896-1.8583.2723.77813.33830.056-5.309-0.9982.35124.169-6.84633.032
1506ii_A1730G1731:C1792G1793_ii-0.608-0.5363.111-2.0768.09957.807-0.9520.523.0368.332.13558.357
1514ii_A1740U1741:A1782G1783_ii-1.72-3.404-0.72195.424-120.729145.646-1.7610.819-0.228-60.807-48.061172.349
1530ii_A1839G1840:C1847U1848_ii-0.667-1.1073.467-5.8153.86933.605-2.520.1643.3876.6049.92434.302
112ii_C4U5:A19G20_ii0.316-1.3773.673.7822.54436.824-2.5440.0663.5844.008-5.95937.096
137ii_C35U36:A509A510_ii-0.286-1.9034.375-15.4778.92930.07-4.923-2.553.43515.59927.03934.872
139ii_C37A39:G505G508_ii2.319-1.6236.0292.7812.07848.608-3.499-2.3765.61714.402-3.31450.071
154ii_C48C49:G467G468_ii1.112-2.1663.4565.4815.66428.066-5.575-0.9843.12511.397-11.02929.13
155ii_C49U51:A466G467_ii-4.285-1.2173.9991.52818.95945.912-3.0565.2463.15923.169-1.86749.498
162ii_C69G71:A79G80_ii0.999-3.2166.06838.769-14.35654.325-1.7112.3156.164-13.741-37.1167.299
174ii_C96U97:A423G424_ii0.671-0.9153.046-8.6427.44432.737-2.544-2.2972.53112.73514.78534.616
176ii_C98C399:G421G422_ii-0.839-2.1333.117.86112.79131.99-5.0512.3251.89421.774-13.38235.254
186ii_C106A107:U344G345_ii-0.198-1.4422.8152.15213.29828.335-4.5940.6781.9425.428-4.11531.315
194ii_C117U119:U335C336_ii-3.822-0.0794.034.80315.09725.878-3.6148.422.82130.358-9.65830.272
199ii_C125G303:C327A329_ii-1.799-3.9184.8330.1462.72363.326-3.9041.7224.6752.593-0.13963.379
1108ii_C151U152:A166G167_ii0.523-1.0933.595-1.3959.4634.464-3.222-1.0653.17115.5992.29935.727
1114ii_C185G186:C209G210_ii0.122-3.0193.355-8.22917.48523.583-8.325-1.4410.87136.01216.94830.402
1116ii_C187U188:U207G208_ii0.947-3.1952.8681.3654.47328.714-7.156-1.6442.3958.945-2.72929.085
1120ii_C191U192:G203G204_ii-0.678-1.6784.318-20.30331.19831.54-4.993-1.0912.08542.82527.8748.424
1121ii_C194U196:U200G201_ii-0.66-2.3483.52110.96236.25443.849-4.1141.1921.2140.758-12.32457.324
1128ii_C220A221:A288G289_ii1.019-1.0474.52317.0311.01740.852-1.5320.9574.5551.387-23.21744.131
1133ii_C272G273:C236G237_ii-0.396-2.2382.6138.736.95325.15-5.8962.3191.71415.056-18.90527.478
1152ii_C306G307:C324G325_ii-1.069-1.6274.105-3.56110.72427.966-5.7331.1933.37421.137.01730.121
1154ii_C308A309:G322G323_ii1.305-2.8164.57415.9024.74820.113-8.1533.4593.82911.406-38.20326.021
1157ii_C311C312:G319G320_ii-0.282-1.2733.2750.713.83324.28-5.6180.7362.22829.97-1.51627.901
1158ii_C312C313:U318G319_ii-0.011-0.0843.2750.19610.15235.525-1.5040.0443.13416.233-0.31336.903
1159ii_C313C315:G317U318_ii0.9962.6163.5023.59215.07454.9291.757-0.814.08715.989-3.8156.908
182ii_C347C348:G394G395_ii-0.133-1.9213.5071.2189.97431.08-5.1240.4452.76718.033-2.20332.626
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1517ii_G1743G1744:C1779U1780_ii1.709-1.0862.853-3.421-15.61335.9150.101-2.9242.896-23.9165.2439.203
1519ii_G1748C1749:G1771C1772_ii0.051-0.9872.7210.19916.3347.288-2.0550.5072.25219.444-12.14450.848
1520ii_G1751G1752:C1768U1769_ii-1.272-1.6633.084-0.7553.15522.178-5.3483.0162.8638.1451.9522.411
1521ii_G1752G1753:C1767C1768_ii0.276-2.0223.4081.43515.15733.358-5.139-0.2582.31424.858-2.35436.578
1522ii_G1753G1754:C1766C1767_ii0.13-1.9733.7843.90911.79132.771-5.1670.4092.91920.024-6.63834.985
1523ii_G1754U1755:G1765C1766_ii-0.522-1.5883.130.522-2.17331.099-2.5521.0673.222-4.046-0.97231.177
1528ii_G1837U1838:G1849C1850_ii0.498-1.1353.1262.40813.42538.321-2.992-0.4742.62519.705-3.53540.59
1531ii_G1840G1841:C1846C1847_ii0.745-2.0953.261-0.601-0.22128.162-4.254-1.6713.261-0.4531.23528.169
113ii_U5G6:C18A19_ii-0.828-2.0063.6652.57220.85532.193-5.5321.5681.98133.525-4.13438.291
136ii_U34C35:A510A511_ii-0.404-1.4444.05113.96815.01433.86-4.1622.4792.82423.317-21.69339.429
138ii_U36C37:G508A509_ii-0.073-2.2632.9949.2134.92524.4-6.0382.2252.32111.029-20.63226.511
150ii_U44G41:C471G472_ii0.4540.8652.067-10.23412.387-24.472-3.334-0.4371.533-25.952-21.44-29.208
158ii_U57A490:U87G88_ii-1.398-1.3993.605-15.42118.4737.014-3.7990.2592.96626.00521.71343.917
175ii_U97C98:G422A423_ii-0.853-1.4783.3266.5264.7536.645-2.9012.1532.9297.444-10.22737.493
189ii_U109U110:G341U342_ii0.732-2.4174.02320.0335.15727.009-5.1832.783.2869.475-36.80933.903
190ii_U110A111:C340G341_ii0.615-2.7913.623-4.65216.29618.02-10.359-2.5320.71241.89711.9624.689
192ii_U115U116:G337A338_ii-1.439-1.3683.3873.92114.63533.068-4.1032.8222.40824.195-6.48236.286
193ii_U116C117:C336G337_ii-1.068-1.4013.594-5.1579.00629.608-4.4040.9423.17816.9799.72331.336
195ii_U119U120:U334U335_ii0.019-1.173.173-4.73311.42338.346-2.897-0.5232.70916.8646.98740.218
196ii_U120U121:A333U334_ii-0.067-1.1583.524-0.5894.62942.714-2.0670.0293.3876.3330.80642.956
197ii_U121G122:C332A333_ii-0.463-1.783.33-5.77512.59126.729-5.805-0.1942.32425.19911.55930.047
1100ii_U140U144:A175A304_ii4.810.773-4.822-62.85152.502179.1360.403-2.398-4.8376.25131.425179.887
1101ii_U144G145:C174A175_ii0.047-1.7384.197-3.67610.5930.261-5.39-0.8693.38519.4656.75732.225
1105ii_U148A149:U169A170_ii2.5590.5093.3098.8223.122.032-7.46914.4173.22725.93-73.3279.575
1109ii_U152G153:G165A166_ii1.353-3.2472.83311.01715.7172.074-3.087-0.8422.34113.125-9.20474.249
1111ii_U154G155:U163A164_ii2.336-2.8933.1065.1691.29112.091-14.031-4.3343.4735.775-23.12513.209
1117ii_U188G189:A206U207_ii0.425-1.923.4220.6176.07271.972-1.837-0.343.2765.158-0.52472.196
1123ii_U215U216:A293C294_ii-0.528-0.6833.2860.5458.52943.208-1.7040.7553.09711.448-0.73244.005
1124ii_U216U217:A292A293_ii-1.23-1.3513.089-0.31215.32314.359-8.7393.2771.15747.1030.95820.972
1125ii_U217A218:U291A292_ii-0.142-1.9042.892-9.57418.29724.963-5.747-0.9611.22735.55718.60532.292
1127ii_U219C220:G289A290_ii0.062-2.0093.2861.8047.2630.701-4.9530.22.7513.462-3.34631.578
1151ii_U305C306:G325A326_ii-0.37-2.6414.17813.587-11.16825.356-1.8794.4664.238-22.337-27.17630.776
184ii_U349C352:C392G393_ii-1.085-0.733.765.367.56562.534-1.0751.3043.5667.245-5.13463.149
1162ii_U356A361:U383G384_ii3.849-2.1325.70820.488-104.078-4.753.1822.771-2.53586.55317.039-106.149
1164ii_U362G363:C381A382_ii0.389-2.6372.8454.12215.83824.811-7.331-0.1941.05632.708-8.51329.651
1167ii_U365A366:U378A379_ii0.012-1.1732.822-3.5899.14623.706-4.71-0.8382.19921.1388.29525.635
1170ii_U368G370:U374C376_ii-0.047-0.1285.43441.0034.43389.678-0.2161.2355.1023.019-27.92496.841
168ii_U444A445:G428A429_ii0.087-3.0042.7682.20111.73368.725-2.961-0.0142.29510.315-1.93569.628
1175ii_U451C452:G457A458_ii-1.31-1.4053.1983.2478.57333.105-3.6012.6832.62714.697-5.56634.317
143ii_U477A479:U501A502_ii-0.67-1.0883.1594.3922.827.753-2.842.3282.8995.774-9.05528.228
147ii_U485C486:G496A498_ii1.914-0.7572.979-1.536.02135.646-1.966-3.2732.7379.7442.47636.166
1189ii_U528C529:G534A535_ii0.304-1.7023.2880.281.7730.175-3.619-0.5283.1883.396-0.53730.227
1191ii_U552G553:C582A577_ii1.219-2.6885.479-6.17125.5844.492-12.125-4.16-1.92678.23918.87226.692
1195ii_U561U562:C568C569_ii1.216-1.7443.457-4.7177.54348.695-2.646-1.8053.0499.065.66549.453
1196ii_U585U586:A630A631_ii0.288-1.0253.3223.1047.76534.583-2.797-0.0253.04212.831-5.12835.55
1197ii_U586G587:C629A630_ii-0.159-1.6912.6246.487.40428.868-4.3041.2542.05414.335-12.54630.465
1203ii_U599G600:C623A624_ii-0.126-1.4973.137-1.35321.47324.101-5.7530.0341.38442.222.66132.201
1206ii_U602A606:G615A619_ii0.524.2534.74121.64-124.383-27.9521.7811.0115.22481.79414.23-127.964
15ii_U637A638:U26A27_ii-0.644-1.6492.9534.03517.52631.186-4.6051.4891.72129.708-6.83935.888
17ii_U639A640:C24A25_ii-1.252-0.782.8617.6960.04428.393-1.3654.4521.7930.08-32.40533.359
19ii_U641U642:A22G23_ii-0.655-2.3213.1010.6091.32926.171-5.4521.5972.9662.932-1.34326.211
110ii_U642A643:U21A22_ii0.42-1.9723.745.89613.59628.334-6.1280.3382.58325.674-11.13331.905
1222ii_U656U657:A1140A1141_ii0.15-0.9972.8975.5222.1840.786-1.6250.3122.8383.108-7.87241.198
1272ii_U795U796:A861U862_ii-0.914-1.514.196-6.98711.79540.037-3.6060.3743.72816.6489.86142.228
1273ii_U796U797:A860A861_ii-0.016-1.5513.454-0.4977.74828.129-4.761-0.0762.93115.570.99929.16
1274ii_U797A798:U859A860_ii0.096-1.3633.011.56416.76930.921-4.3250.0332.0328.921-2.69735.111
1277ii_U800U801:A854G855_ii2.071-1.2723.31718.51717.59118.024-6.1550.1332.44238.123-40.12931.173
1278ii_U801U802:U853A854_ii-1.4920.3653.729-18.8083.24843.0610.124-0.0634.0324.18824.25346.917
1279ii_U802G803:C852U853_ii0.089-2.3383.7483.93720.00229.398-6.5550.3931.83434.657-6.82235.646
1281ii_U811A812:U844A845_ii-0.228-1.5373.743.8115.91731.978-4.8740.942.66126.81-6.41735.826
1137ii_U888U889:A232A233_ii0.089-1.4643.5832.8414.826.292-5.7670.3982.42929.641-5.68930.239
1138ii_U889G890:C231A232_ii0.329-1.5463.566-1.1117.73535.195-4.382-0.622.52127.2891.70839.299
1141ii_U892U893:A228A229_ii1.249-2.0794.001-8.22127.4433.599-5.35-2.441.60539.71311.89843.882
1142ii_U893U894:A227A228_ii-1.059-2.3292.4460.139-9.82616.302-2.2583.2743.287-31.227-0.44319.017
1143ii_U894U895:A226A227_ii1.401-2.3894.002-8.207-7.94639.4-2.326-3.1274.031-11.49611.87340.959
1144ii_U895C896:A882A226_ii3.092-2.7743.4891.166-0.39268.708-2.442-2.6933.548-0.347-1.03368.717
1233ii_U913U914:G674A675_ii-0.282-2.2142.41712.087-1.24131.75-3.6461.9142.247-2.172-21.1533.939
1234ii_U914U1017:A916G674_ii-3.27-4.528-0.165-153.507-81.098102.46-2.0321.1953.003-40.87777.375176.002
1251ii_U935U936:U998U999_ii0.442-1.7023.6537.3196.28630.4-4.3420.6393.26111.625-13.53631.86
1252ii_U936C937:G981U998_ii-0.701-2.0244.1110.5845.43831.493-4.8621.4013.7059.924-1.06531.952
1255ii_U939A940:G978A979_ii0.66-1.7683.509-0.46314.33231.771-5.062-1.1732.49524.6690.79734.781
1257ii_U941U942:A976A977_ii0.697-0.9493.201-1.9456.7539.139-2.142-1.242.9679.9792.87539.74
1258ii_U942G943:C975A976_ii0.829-1.5932.655-6.50710.16527.185-4.605-2.5751.72220.39813.05829.698
1265ii_U950U965:G967A968_ii4.978-0.2065.1333.0975.09580.366-0.371-3.7215.2713.943-2.39780.549
1235ii_U1017A918:U1018A916_ii0.1953.7593.024-160.57575.577-139.828-2.082-0.3332.351-37.821-80.357-179.132
1225ii_U1021C1022:A669G670_ii-1.212-1.7543.0216.091-3.97453.22-1.7131.6942.99-4.413-6.76353.678
1297ii_U1034C1035:G1072A1073_ii-0.885-2.123.9841.96623.0529.217-6.4231.6541.82438.918-3.31937.109
1301ii_U1042C1043:G1067U1068_ii-0.412-1.1693.6671.858-1.05145.132-1.4170.7223.673-1.369-2.41945.179
1221ii_U1084U656:A1141A1146_ii-4.059-2.02-0.9037.968-162.075-68.3920.247-2.084-2.0184.8884.174-165.354
1328ii_U1110U1111:C1114A1115_ii3.310.733.1674.06849.383165.7430.283-1.6593.21524.86-2.048167.061
1325ii_U1132U1133:A1144G1092_ii0.441-0.7333.71817.092-5.427123.202-0.361-0.083.759-3.078-9.692123.958
1326ii_U1133G1136:C1143A1144_ii-0.8210.2296.1927.39113.4541.154-4.23211.057-0.39938.746-78.88430.538
1334ii_U1168A1169:U351A1184_ii0.577-4.0673.836-12.86918.284.788-12.044-2.71-2.76663.83244.93922.856
1336ii_U1170G1171:U1182G1183_ii-2.524-0.3182.9523.97218.58849.745-1.3883.0462.521.225-4.53553.036
1339ii_U1173U1174:A1179G1180_ii-0.145-1.9433.5251.14612.6128.174-6.0020.4862.44324.404-2.21830.836
1340ii_U1174G1175:A1178A1179_ii-3.003-1.4272.88-11.5013.57244.324-2.1352.8793.3984.63414.9245.851
122ii_U1197U1198:A1692G10_ii1.043-1.7162.6030.416-3.28427.761-2.906-2.0772.798-6.814-0.86327.954
123ii_U1198G1199:C1691A1692_ii0.449-1.6483.28715.13230.21425.275-4.930.6911.048.494-24.28741.976
1348ii_U1238G1515:C1233U1234_ii3.0462.6420.217-79.982157.285-174.054-1.3251.5210.166-78.644-39.992-179.816
1360ii_U1239U1240:G1251U1490_ii2.655-2.9593.799-0.743-2.485-10.48720.03912.8123.19213.328-3.984-10.803
1361ii_U1240G1241:C1250G1251_ii-0.227-1.9113.386-0.3129.82726.463-6.0640.3972.5320.5850.65428.199
1373ii_U1284U1285:U1306C1307_ii-0.772-2.2283.717-3.2343.4627.61-5.5120.7463.4837.1836.71328.005
1374ii_U1285G1286:C1305U1306_ii-0.911-1.8273.6986.6539.50737.886-3.8642.1612.97714.24-9.96539.561
1380ii_U1319G1320:U1500U1501_ii-0.847-0.8922.7515.2879.03536.866-2.261.8182.33713.945-8.1638.274
1385ii_U1325A1328:U1495G1496_ii1.074-2.3713.247.13410.46314.024-11.809-0.1541.50834.924-23.81218.874
1387ii_U1329G1330:U1492A1494_ii-1.264-2.0494.3152.93813.72838.033-4.8182.2243.30920.242-4.33240.451
1393ii_U1335U1336:A1482A1483_ii-0.291-1.5812.717.9785.25825.254-4.4212.1912.15211.513-17.47126.973
1394ii_U1336C1337:U1481A1482_ii2.395-2.0760.521-89.798-139.20852.753-0.743-1.40.632-72.94247.052167.157
1397ii_U1342U1343:A1378A1379_ii-0.475-2.4242.803-2.534-2.9720.943-5.4380.333.147-8.0796.89421.3
1398ii_U1343G1344:G1377A1378_ii-1.068-2.072.8669.8930.59319.877-5.5575.7442.0441.597-26.62622.189
1401ii_U1346G1347:U1356A1375_ii1.54-1.8232.973-0.48714.33136.624-4.096-2.342.1221.8070.74239.241
1409ii_U1386C1387:G1475A1476_ii0.012-1.8683.294-3.7773.22529.876-4.213-0.7693.0566.2017.26430.277
1416ii_U1396A1397:U1441A1442_ii1.074-1.1672.739-4.90421.8515.182-5.972-3.080.41854.91712.32427.0
1421ii_U1403U1404:A1434A1435_ii-0.948-1.2443.209-1.6374.15335.42-2.611.3183.0886.7922.67735.691
1434ii_U1453G1454:C1464A1465_ii0.448-1.7393.001-5.22513.45628.587-5.094-1.5651.90325.3139.82831.957
1358ii_U1525A1526:G1223A1224_ii-0.002-3.0512.83915.2795.70227.102-6.4412.2311.90510.995-29.46131.551
1442ii_U1534G1535:C1588A1589_ii0.332-1.3892.287-1.4984.19529.764-3.249-0.8442.0578.1092.89630.088
1446ii_U1544G1545:C1577C1578_ii0.643-1.6083.603-17.7493.69825.838-3.668-4.5642.4287.24434.76531.476
1450ii_U1555A1556:C1569G1570_ii-3.977-1.3192.581-0.95114.24618.911-6.4669.4841.4437.2382.48723.656
1460ii_U1603C1604:A1625U1626_ii0.197-0.9673.359-1.8318.95338.127-2.508-0.5123.05113.4712.75539.167
1467ii_U1611A1656:A1615U1619_ii-3.1574.0092.8299.51163.17169.8411.8741.5863.15281.617-4.757178.539
1343ii_U1637U1638:A1219G1220_ii-2.287-2.5793.667-8.292.5986.613-19.015-5.3923.34615.78950.37510.915
1344ii_U1638C1639:G1218A1219_ii0.039-0.8222.8071.9934.85837.635-1.7850.1542.6837.486-3.07137.986
1471ii_U1648G1649:C1665G1666_ii0.152-1.312.5610.60710.97220.17-5.951-0.2351.63928.736-1.5922.942
1482ii_U1702C1703:G1820U1821_ii1.539-2.1023.977-9.94411.89647.15-3.48-2.653.03214.42312.05649.495
1483ii_U1706A1707:U1815A1816_ii-0.492-1.4262.409-1.980.30927.776-3.0170.6722.4220.6434.11727.847
1486ii_U1709A1710:A1812A1813_ii0.642-1.5293.1453.95211.66319.048-7.507-0.4111.98131.353-10.62422.651
1492ii_U1715G1717:U1806A1807_ii1.936-3.4994.3153.9987.7976.822-29.791-4.0080.89646.419-23.80411.101
1496ii_U1720G1721:U1802A1803_ii0.22-1.5263.0313.52111.26826.013-5.2520.2282.20423.55-7.35928.525
1499ii_U1723U1724:G1799A1800_ii0.928-2.1174.11911.01914.35340.171-4.4620.0113.34319.731-15.14943.905
1500ii_U1724U1725:U1798G1799_ii-2.031-1.5553.811-15.6810.02415.565-7.841-1.6253.12727.16242.48824.217
1501ii_U1725A1726:U1797U1798_ii1.457-1.7483.1551.51110.97437.581-3.798-2.0132.61716.598-2.28539.123
1504ii_U1728G1729:A1794A1795_ii-0.664-1.0523.4085.0538.83957.099-1.5630.9583.1639.166-5.2457.924
1515ii_U1741C1742:G1781A1782_ii-0.596-1.7863.465-9.01614.08724.628-6.316-0.6492.22829.12318.6429.697
1524ii_U1833U1834:A1853A1854_ii0.572-1.2492.731.6381.52131.024-2.571-0.8072.6932.839-3.05731.102
1525ii_U1834C1835:G1852A1853_ii0.546-1.2843.28911.7288.94836.847-2.9330.5562.94513.51-17.70939.595
1529ii_U1838A1839:U1848G1849_ii0.365-1.4372.6312.5117.57720.983-5.884-0.3621.14440.214-5.74227.423

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.