A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: NA2502  PDB ID: 4KZY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
140ii_A39A40:U504G505_ii-0.29-0.8273.682-5.80810.0457.608-1.424-0.0393.51810.3035.96158.666
141ii_A40A476:G503U504_ii0.701-0.8654.001-4.5715.39473.107-0.933-0.7633.8954.5183.82973.401
152ii_A45G47:C469G470_ii-2.984-2.7212.18779.651-126.546111.011-0.8081.8662.217-65.46-41.202162.881
156ii_A50G52:C465U478_ii5.578-0.4575.854-10.90611.443178.795-0.231-2.7925.8485.7225.453178.806
161ii_A64G66:G82A83_ii2.377-0.4573.5183.756-1.50511.1340.2-5.4894.117-7.442-18.57511.845
163ii_A92A437:U433G434_ii-2.030.2423.278-3.7310.697-2.679-12.831-14.069-0.117-72.461-25.266-11.64
181ii_A102C347:G395U396_ii1.945-2.093.071-4.181-2.58793.392-1.39-1.4073.046-1.7762.87193.491
180ii_A104A102:U396C346_ii5.1320.012-3.699-79.84175.675166.1050.139-2.432-4.0537.97440.064172.044
187ii_A107G108:C343U344_ii0.242-0.6563.212-2.2778.15935.123-2.165-0.6992.96913.2833.70836.099
191ii_A111U115:A338C340_ii-2.375-0.8165.78816.7586.4182.36-0.8712.4575.2574.817-12.59383.95
1114ii_A147U148:A170A171_ii-0.869-0.9063.627-19.704-2.86934.481-0.934-1.4773.651-4.41430.31639.666
1116ii_A149A150:C168U169_ii-0.725-2.0463.546-3.6320.27255.8-2.20.5463.5740.293.87655.909
1117ii_A150C151:G167C168_ii3.581-3.3983.5354.25927.55745.299-5.367-3.7871.65532.424-5.01152.806
1127ii_A190C191:G204G205_ii3.325-1.5343.54829.77-26.21247.1690.388-1.1214.955-27.776-31.54760.89
1134ii_A218U219:A290U291_ii-0.234-1.9453.2850.4256.35931.005-4.680.5032.83611.741-0.78431.637
1137ii_A221G222:U287A288_ii-0.474-0.2263.471-2.10825.97945.958-2.0670.392.97730.5622.4852.484
1105ii_A309G310:C321G322_ii-0.764-3.2084.4413.645-7.68533.189-3.6013.8924.416-12.618-22.40236.604
1159ii_A354C355:G385U386_ii-0.429-1.9973.188-1.526.75729.668-5.0330.542.69612.9742.91930.448
1162ii_A361U362:A382U383_ii-0.979-1.5863.492.1416.92644.191-3.3371.3942.69521.568-2.72747.216
1167ii_A366G367:C377U378_ii0.325-1.4663.1393.2159.01127.805-4.63-0.0212.56918.087-6.45329.374
1171ii_A404A405:U412U413_ii-0.302-1.6522.993-1.2612.38529.567-3.6750.3522.8644.6612.46429.687
1172ii_A405U406:G411U412_ii0.254-1.6133.4612.1578.64943.126-2.982-0.1323.10611.618-2.89743.995
164ii_A437A439:C432U433_ii-0.37-1.1963.206-10.5263.39738.032-2.16-0.6673.0845.08215.74939.55
165ii_A439G442:C431C432_ii3.301-1.3853.351-11.111-13.74764.612-0.72-3.4373.021-12.61610.19766.733
169ii_A445C446:G427G428_ii-0.9111.3362.7735.1264.097-8.996-12.0651.7812.17-22.57928.253-11.131
172ii_A448C449:G460G461_ii1.549-1.6033.021.8436.06330.177-4.068-2.5952.74111.487-3.49130.82
142ii_A476U477:A502G503_ii-3.234-3.312.57423.8492.15516.753-6.6857.645-1.384.995-55.28829.155
144ii_A479C480:G500U501_ii-1.122-2.4053.444-0.1683.92935.799-4.4581.793.1766.3680.27236.008
159ii_A490G62:C86U87_ii-3.348-2.0472.399.571-2.44554.082-2.1234.0081.901-2.664-10.42854.91
11ii_A506G634:C30U31_ii1.476-2.6723.246-16.078-2.17575.669-2.082-1.6312.996-1.75412.96477.134
1176ii_A513U514:A584A633_ii-1.978-2.6682.8821.935.83-178.8681.333-0.9892.884-2.9150.965-178.87
1177ii_A516C517:G548G549_ii0.343-1.5712.966-3.2294.02525.536-4.438-1.5262.6288.9897.21126.043
1179ii_A518A519:A545U547_ii1.027-2.4153.728-10.3541.23923.611-5.78-5.3682.8982.85623.86825.781
1180ii_A519A521:U543A545_ii1.113-0.7066.104-15.32724.37766.101-2.128-1.915.27721.33913.41771.442
1181ii_A521C522:G542U543_ii-0.343-0.422.999-5.33110.25637.018-1.777-0.0782.8115.6918.15538.72
1183ii_A523G524:C540U541_ii0.833-0.6443.6531.59311.424.859-4.431-1.3333.10924.851-3.47327.357
1186ii_A526C527:G536G537_ii1.9-2.54.0720.30414.58872.886-2.617-1.5653.59612.16-0.25374.133
1192ii_A554G555:C575G576_ii0.854-0.9244.27-6.29612.60763.647-1.529-1.1293.95511.8025.89465.028
1199ii_A589G596:C626U627_ii-0.4112.81-0.402166.441-15.26121.0641.37-0.263-0.728-8.11-88.449167.357
1206ii_A606G607:C614G615_ii1.212-1.0912.9363.51416.51548.024-2.275-1.2022.53319.6-4.1750.74
16ii_A638U639:A25U26_ii0.759-0.9053.233-13.2341.71528.192-1.991-3.7752.573.29725.44331.133
18ii_A640U641:G23C24_ii0.985-0.5543.509-5.12925.28239.168-2.87-1.6842.5833.6556.82846.619
111ii_A643C4:G20U21_ii-2.724-1.8545.27227.7443.85551.476-2.1984.8943.3874.112-29.58758.143
1212ii_A654G655:C1158C1159_ii0.132-1.6393.6160.36311.60633.307-4.481-0.1632.90219.524-0.6135.219
1214ii_A661G1085:U1156U1157_ii-0.348-2.8843.00410.1764.82410.457-13.5267.0640.91620.243-42.69715.356
1280ii_A798C799:G856U859_ii3.471-1.0214.091-22.7752.7253.94-1.2-4.8332.5122.85823.93158.276
1287ii_A812G813:A843U844_ii-0.349-0.723.603-3.7832.01267.642-0.730.1543.5961.8063.39467.761
1289ii_A826G827:C839U840_ii0.273-3.307-4.139139.7-103.931-125.6311.018-0.718-4.68452.15970.11-177.314
1156ii_A899A900:U878U879_ii-1.02-4.115-1.198119.696-117.954137.922-2.1590.409-0.347-59.255-60.13175.716
1157ii_A900C901:G877U878_ii-0.245-2.0883.37-3.5417.17532.291-4.811-0.1452.86312.6596.24833.242
1235ii_A918G919:C1015U1018_ii2.835-1.753.646-4.446-0.14640.764-2.481-4.5673.338-0.2096.35940.995
1249ii_A934U935:U999U1000_ii0.768-1.0163.0745.606-2.06145.055-1.14-0.5193.184-2.676-7.27845.429
1255ii_A940U941:A977G978_ii-0.351-0.8583.343-5.9213.11134.86-1.874-0.313.2715.1359.77235.476
1295ii_A953G955:A960U962_ii-1.058-0.7625.9869.11218.065106.62-0.8950.8685.78511.2-5.65107.941
1296ii_A986A988:G929A997_ii-0.4953.8431.98-144.181-88.21297.0732.164-0.1420.441-44.82173.259172.739
1297ii_A988G989:C996G929_ii-1.463-0.523.904-16.1012.142-19.6480.534-8.1772.151-5.263-39.559-25.442
1222ii_A1019A1020:U671U672_ii-1.654-2.0413.506-5.16211.99538.901-4.2511.7912.96317.4237.49940.953
1223ii_A1020U1021:G670U671_ii-0.002-1.4123.087-1.3576.32637.372-2.91-0.1552.8179.7832.09837.908
1226ii_A1023A1024:G667U668_ii6.417-1.3762.991-1.4577.65335.988-3.049-10.3322.40512.212.32436.794
1227ii_A1024G1025:C666G667_ii0.064-1.1734.037-6.45317.9765.302-1.876-0.3543.62616.2955.85167.738
1229ii_A1026A1027:C664U665_ii-0.515-1.8912.537-11.035-1.88825.812-3.526-1.0912.658-3.99623.35328.097
1230ii_A1027C1028:G663C664_ii-0.062-1.7343.318-1.8644.40141.993-2.852-0.1033.1286.1172.59142.251
1300ii_A1032G1033:C1074C1075_ii-0.5-0.7073.3841.1697.10754.473-1.1990.6133.2657.727-1.27154.911
1309ii_A1046G1047:C1063G1064_ii-0.37-1.0493.321-8.4730.23855.411-1.131-0.1023.3370.2549.05356.005
1311ii_A1048C1049:G1061U1062_ii0.463-1.9223.4246.2541.65634.561-3.4410.2113.3612.758-10.41435.143
1314ii_A1051U1052:A1058C1059_ii-0.304-1.5923.081-3.74312.55838.231-3.5480.0722.47618.5225.52140.335
1218ii_A1089C1090:G1147U1148_ii0.081-1.4673.6351.1375.88143.587-2.5610.0083.4197.875-1.52243.976
1316ii_A1118C1119:G1106U1107_ii1.24-2.4183.553-4.7177.92835.91-4.857-2.5762.79512.6037.49937.038
1327ii_A1129G1130:C1094G1095_ii0.842-1.8812.979-5.9815.26231.48-4.145-2.3922.4449.50910.80932.448
1337ii_A1166U1168:A1184A1185_ii1.666-3.1321.19121.055123.642-45.7610.9421.4481.451-63.34162.015-173.585
1339ii_A1169U1170:G1183U351_ii5.4110.6111.93618.385-9.7279.5336.697-3.914.894-30.699-58.0222.858
116ii_A1191A1192:U15G16_ii-1.73-1.373.21-13.531.8449.286-1.7231.0263.4922.15815.87551.028
117ii_A1192G1193:C14U15_ii1.561-1.9163.6251.08-0.96844.282-2.44-1.9573.699-1.284-1.43244.304
120ii_A1195A1196:A11U12_ii-0.184-1.033.3760.0276.27940.557-2.1610.2653.1888.993-0.03941.02
121ii_A1196U1197:G10A11_ii-0.788-1.6853.302-5.1656.16731.337-4.0970.5193.01311.1889.37132.328
125ii_A1200C1201:G1688U1689_ii0.584-1.243.370.6327.48938.604-2.732-0.7943.09411.198-0.94539.301
128ii_A1204A1205:U1685U1686_ii-0.541-1.7943.286-4.3017.84536.071-3.8220.2982.8912.4356.81737.129
129ii_A1205G1206:C1684U1685_ii0.429-2.1513.1342.6443.83926.629-5.498-0.3012.838.255-5.68627.027
134ii_A1210A1213:U1676U1680_ii4.9640.2643.661-17.426-14.313126.6950.267-2.9093.253-7.9829.718127.803
135ii_A1213C1214:G1675U1676_ii-0.507-1.5333.383-0.479-0.88635.747-2.3640.7533.425-1.4430.7835.76
1371ii_A1272C1273:G1316G1317_ii0.713-1.2053.848-5.0972.26464.851-1.23-0.913.752.1074.74465.064
1373ii_A1274C1275:G1314U1315_ii-0.027-1.4343.072.1488.1429.738-4.0870.4182.58815.475-4.08430.881
1376ii_A1283U1284:C1307U1310_ii6.029-0.6792.08110.26925.3472.32-1.085-4.6432.48320.763-8.41476.651
1380ii_A1287G1298:U1303U1304_ii-1.6522.1470.585108.555119.352-85.083-1.184-0.7380.049-61.88956.291-166.276
1382ii_A1289G1290:C1301U1302_ii0.536-0.9123.007-8.8085.89430.162-2.591-2.372.53510.91116.30631.929
1390ii_A1328U1329:A1494U1495_ii0.542-1.4753.078-0.28910.80339.831-3.127-0.7982.60515.5140.41541.213
1408ii_A1349G1350:A1353U1354_ii-4.606-1.6693.0174.48418.94659.396-2.3184.6242.12918.587-4.39962.228
1417ii_A1392G1394:A1444G1445_ii-2.4754.8342.531-126.8797.685-58.074-2.354-1.134-3.035-51.941-67.458-162.639
1421ii_A1397A1398:U1440U1441_ii-0.65-1.1743.0182.3519.27432.447-3.3231.4492.54416.164-4.09733.791
1422ii_A1398A1401:U1437U1440_ii0.592.0563.8216.781-0.23895.6931.39-0.2593.844-0.16-4.56995.875
1423ii_A1401G1402:C1436U1437_ii0.705-1.0352.911-1.8455.36930.142-2.864-1.6442.64410.213.50830.659
1429ii_A1410C1411:G1427U1428_ii0.257-1.7143.382-7.4257.32733.597-3.906-1.5062.83812.31312.47635.135
1434ii_A1417G1418:G1421U1422_ii-3.031-2.2612.927-3.6966.00169.493-2.1672.5312.8865.2513.23469.804
1436ii_A1451G1452:C1466C1467_ii0.481-1.8873.52915.289.07539.142-3.5340.9433.01712.777-21.51242.843
1363ii_A1526C1527:G1633G1223_ii0.5970.2792.9672.9070.50916.2250.648-0.2343.0321.786-10.1916.489
1442ii_A1528G1531:C1592G1595_ii0.1572.1036.67997.645-72.679107.3282.1681.3555.009-39.298-52.797146.463
1444ii_A1532C1533:U1590U1591_ii-0.738-1.8553.964-1.11317.04443.802-3.9160.8253.09421.8821.4346.861
1455ii_A1556C1557:G1568C1569_ii1.112-2.3623.354-6.419-2.07446.133-2.808-1.9543.277-2.638.1446.597
1463ii_A1602U1603:U1626G1627_ii-1.385-0.2252.827-12.42415.58640.976-1.560.7842.85420.84516.61645.378
1470ii_A1609U1611:U1619U1620_ii-0.465-3.1775.2065.6516.051100.113-2.2150.445.0383.942-3.681100.363
1345ii_A1635A1636:U1221G1222_ii1.811-1.2194.1596.84121.6156.081-2.55-1.3853.68922.014-6.96960.142
1346ii_A1636U1637:G1220U1221_ii0.263-1.2873.145-1.2293.14141.836-2.106-0.4873.0374.3911.71741.966
1472ii_A1645A1646:U1668G1669_ii0.025-1.2783.0252.6027.96457.196-1.7080.12.8388.27-2.70157.755
1473ii_A1646G1647:U1667U1668_ii0.049-1.8453.6554.31914.19333.304-4.9560.532.66223.376-7.11336.373
1488ii_A1707C1708:G1814U1815_ii-0.484-1.5333.1531.887-0.00635.594-2.5031.0533.125-0.011-3.08435.643
1491ii_A1710C1711:G1811A1812_ii-0.161-1.0063.235-7.341-0.16339.62-1.443-0.5933.218-0.23810.71940.267
1495ii_A1714U1715:A1807G1808_ii1.59-0.5723.449-4.92625.02559.033-1.648-1.7222.89824.2084.76663.849
1499ii_A1719U1720:A1803U1804_ii-0.025-1.1593.26-4.7295.58436.464-2.542-0.5743.0358.8157.46537.167
1506ii_A1726G1727:C1796U1797_ii0.896-1.8573.2723.79813.3230.063-5.304-0.9952.35424.133-6.88133.033
1510ii_A1730G1731:C1792G1793_ii-0.608-0.5373.11-2.0758.09357.801-0.9510.5213.0358.3252.13558.35
1518ii_A1740U1741:A1782G1783_ii-1.719-3.405-0.7295.411-120.721145.729-1.7610.818-0.228-60.801-48.054172.363
1534ii_A1839G1840:C1847U1848_ii-0.667-1.1073.468-5.8143.88533.613-2.5210.1663.3876.6299.9234.312
112ii_C4U5:A19G20_ii0.317-1.3783.673.7692.51536.829-2.5410.0623.5853.963-5.93937.097
137ii_C35U36:A509A510_ii-0.285-1.9044.376-15.4968.88930.081-4.915-2.5573.43915.52627.06534.881
139ii_C37A39:G505G508_ii2.321-1.6246.0292.78712.07148.616-3.498-2.3775.61814.392-3.32350.076
154ii_C48C49:G467G468_ii1.114-2.1673.4585.4745.62828.079-5.569-0.9863.1311.321-11.01329.134
155ii_C49U51:A466G467_ii-4.286-1.223.9961.50518.99445.903-3.0615.2463.15623.213-1.8449.502
162ii_C69G71:A79G80_ii1.001-3.2166.06838.78-14.33554.331-1.7122.3146.164-13.72-37.11667.306
174ii_C96U97:A423G424_ii0.672-0.9133.044-8.6157.45932.731-2.544-2.2942.52912.76314.74234.607
176ii_C98C399:G421G422_ii-0.84-2.1323.117.8612.79531.978-5.0512.3271.89321.788-13.38535.245
186ii_C106A107:U344G345_ii-0.201-1.4432.8142.17813.3128.328-4.5950.6881.93725.452-4.16531.315
194ii_C117U119:U335C336_ii-3.823-0.084.0314.79315.09125.894-3.6138.4172.82430.334-9.63430.281
199ii_C125G303:C327A329_ii-1.801-3.9164.8350.1662.71863.325-3.9021.7254.6772.588-0.15863.378
1118ii_C151U152:A166G167_ii0.523-1.0933.594-1.3699.50334.453-3.227-1.0613.16815.6712.25835.727
1124ii_C187U188:U207G208_ii0.947-3.1962.8661.3594.46528.718-7.156-1.6452.3948.927-2.71729.087
1128ii_C191U192:G203G204_ii-0.678-1.6794.317-20.33631.20531.533-4.992-1.0932.08342.82927.91148.438
1129ii_C194U196:U200G201_ii-0.657-2.3483.52110.9936.27543.866-4.1121.1891.2140.763-12.34957.354
1136ii_C220A221:A288G289_ii1.017-1.0484.52317.0421.02540.828-1.5350.9634.5541.398-23.24144.113
1141ii_C272G273:C236G237_ii-0.397-2.2392.6148.7496.97625.165-5.8952.3211.71215.095-18.93127.504
1102ii_C306G307:C324G325_ii-1.069-1.6264.106-3.57110.7327.953-5.7351.193.37421.1497.03830.112
1104ii_C308A309:G322G323_ii1.304-2.8174.57515.9084.76120.122-8.1543.4573.82711.433-38.19826.035
1107ii_C311C312:G319G320_ii-0.283-1.2733.2780.68113.8324.279-5.6190.7332.23129.966-1.47527.899
1108ii_C312C313:U318G319_ii-0.01-0.0853.2740.20610.17735.542-1.5070.0433.13316.264-0.32936.925
1109ii_C313C315:G317U318_ii0.9952.6173.5023.59715.07154.9111.758-0.8094.08715.99-3.81756.891
182ii_C347C348:G394G395_ii-0.133-1.9223.5051.2419.95131.073-5.1230.452.76717.997-2.24432.613
183ii_C348U349:G393G394_ii0.055-1.7893.3180.5973.38531.813-3.850.0073.1176.153-1.08531.993
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1509ii_G1729A1730:G1793A1794_ii-0.301-1.5993.665-5.651-0.52-26.0393.621-2.293.4911.137-12.356-26.64
1511ii_G1731G1732:U1791C1792_ii-0.782-1.0023.3380.96410.2533.117-3.2191.4582.88617.464-1.64234.637
1512ii_G1732C1733:G1790U1791_ii0.968-1.3653.126-2.6385.38936.442-2.823-1.8552.8288.5464.18336.916
1516ii_G1738G1739:A1784A1785_ii1.022-0.6412.9096.009-3.18532.705-0.626-0.8563.09-5.582-10.52933.385
1517ii_G1739A1740:G1783A1784_ii-1.51-3.8642.008-150.64693.262-117.721.63-1.2422.107-46.738-75.496-178.541
1521ii_G1743G1744:C1779U1780_ii1.709-1.0872.853-3.435-15.61835.8990.101-2.9262.896-23.935.26339.192
1523ii_G1748C1749:G1771C1772_ii0.051-0.9872.72110.18316.32147.291-2.0560.5052.25319.433-12.12650.845
1524ii_G1751G1752:C1768U1769_ii-1.271-1.6633.082-0.7593.1722.179-5.353.0122.868.1831.95822.414
1525ii_G1752G1753:C1767C1768_ii0.278-2.0223.4091.44515.14533.347-5.141-0.262.31524.848-2.37136.564
1526ii_G1753G1754:C1766C1767_ii0.128-1.9733.7843.90811.81732.772-5.1690.4122.91620.064-6.63634.996
1527ii_G1754U1755:G1765C1766_ii-0.52-1.5883.1310.527-2.1831.088-2.5511.0653.223-4.061-0.98231.167
1532ii_G1837U1838:G1849C1850_ii0.497-1.1373.1282.36813.44738.315-2.997-0.4782.62519.738-3.47540.589
1535ii_G1840G1841:C1846C1847_ii0.745-2.0963.26-0.614-0.23528.163-4.251-1.6753.261-0.4831.26228.17
113ii_U5G6:C18A19_ii-0.828-2.0073.6642.59720.86232.205-5.5291.571.97933.524-4.17338.307
136ii_U34C35:A510A511_ii-0.407-1.4454.0513.95815.03733.875-4.1622.4792.82223.343-21.66839.448
138ii_U36C37:G508A509_ii-0.076-2.2642.9949.2234.93424.374-6.0472.2352.31711.057-20.66926.492
150ii_U44G41:C471G472_ii0.4550.8632.067-10.21112.376-24.491-3.331-0.4341.535-25.921-21.386-29.211
158ii_U57A490:U87G88_ii-1.397-1.3983.605-15.42918.48937.027-3.7980.2572.96626.02121.71443.937
175ii_U97C98:G422A423_ii-0.852-1.4763.3296.4934.76836.662-2.92.1482.9337.47-10.17237.507
189ii_U109U110:G341U342_ii0.733-2.4184.02620.0295.17127.004-5.192.7813.2879.502-36.80733.899
190ii_U110A111:C340G341_ii0.614-2.7913.619-4.64116.25118.038-10.357-2.5290.71741.79111.93424.671
192ii_U115U116:G337A338_ii-1.439-1.3683.3873.9114.61533.075-4.1012.822.4124.162-6.46336.283
193ii_U116C117:C336G337_ii-1.07-1.4023.592-5.1579.01829.594-4.4090.9443.17517.0089.72731.325
195ii_U119U120:U334U335_ii0.019-1.1713.17-4.74911.44238.334-2.9-0.5242.70416.8957.01240.214
196ii_U120U121:A333U334_ii-0.068-1.1573.527-0.5894.5642.715-2.060.0313.3936.2390.80642.95
197ii_U121G122:C332A333_ii-0.462-1.7813.33-5.77412.64426.742-5.807-0.1942.31925.28311.54530.08
1110ii_U140U144:A175A304_ii4.8050.78-4.825-62.833152.54179.3350.403-2.397-4.83176.2731.416179.913
1111ii_U144G145:C174A175_ii0.047-1.7374.197-3.66410.59430.248-5.392-0.8663.38419.4816.73832.212
1115ii_U148A149:U169A170_ii2.5610.513.3098.8423.1492.046-7.50514.3273.2326.077-73.2239.606
1119ii_U152G153:G165A166_ii1.354-3.2472.83610.99315.772.074-3.087-0.8442.34513.116-9.18474.244
1121ii_U154G155:U163A164_ii2.336-2.8943.15.171.29412.114-14.01-4.3463.4675.779-23.0913.231
1125ii_U188G189:A206U207_ii0.425-1.9213.4230.6316.07271.979-1.837-0.3393.2785.157-0.53672.202
1131ii_U215U216:A293C294_ii-0.527-0.6823.2850.5498.5343.184-1.7040.7553.09611.456-0.73843.982
1132ii_U216U217:A292A293_ii-1.228-1.3513.088-0.30915.33514.364-8.7333.2711.15647.1150.95120.984
1133ii_U217A218:U291A292_ii-0.144-1.9052.892-9.5918.31724.967-5.746-0.9581.22635.57918.62832.312
1135ii_U219C220:G289A290_ii0.061-2.0093.2851.7757.24930.717-4.9480.1962.7513.437-3.2931.59
1101ii_U305C306:G325A326_ii-0.371-2.6414.1813.6-11.16125.368-1.884.4684.238-22.314-27.19130.789
184ii_U349C352:C392G393_ii-1.085-0.7293.765.3427.5762.537-1.0741.3033.5667.25-5.11663.15
1161ii_U356A361:U383G384_ii3.851-2.1295.7120.474-104.064-4.73.1822.773-2.53586.57317.033-106.132
1163ii_U362G363:C381A382_ii0.388-2.6382.8434.12815.81924.812-7.332-0.1911.05632.675-8.52529.643
1166ii_U365A366:U378A379_ii0.012-1.1732.824-3.5679.15523.728-4.709-0.8332.221.1418.23825.655
1169ii_U368G370:U374C376_ii-0.049-0.1285.43441.0034.40789.677-0.2151.2365.1013.002-27.92496.839
168ii_U444A445:G428A429_ii0.087-3.0052.7652.23511.74268.724-2.961-0.0142.29210.322-1.96569.629
1174ii_U451C452:G457A458_ii-1.312-1.4063.1983.2128.58833.11-3.6042.682.62714.721-5.50634.322
143ii_U477A479:U501A502_ii-0.67-1.0883.164.3772.84327.759-2.8482.3242.8985.861-9.02328.236
147ii_U485C486:G496A498_ii1.915-0.7572.978-1.496.01335.647-1.965-3.272.7399.7322.41236.164
1188ii_U528C529:G534A535_ii0.303-1.7043.2880.2941.77730.173-3.624-0.5233.1873.41-0.56430.226
1190ii_U552G553:C582A577_ii1.218-2.6895.478-6.13725.6044.495-12.121-4.147-1.92778.26618.75926.703
1194ii_U561U562:C568C569_ii1.216-1.7453.458-4.727.55848.711-2.646-1.8043.0499.0755.66749.471
1195ii_U585U586:A630A631_ii0.29-1.0243.3223.1137.7734.601-2.794-0.0263.04212.832-5.14135.569
1196ii_U586G587:C629A630_ii-0.16-1.692.6256.4827.41328.842-4.3081.2572.05414.365-12.5630.443
1202ii_U599G600:C623A624_ii-0.126-1.4983.136-1.33821.46924.109-5.7520.0371.38342.2062.63132.204
1205ii_U602A606:G615A619_ii0.524.2554.7421.624-124.383-27.8881.7821.0115.22481.8114.222-127.954
15ii_U637A638:U26A27_ii-0.643-1.6492.9534.06117.55231.19-4.6041.491.71929.742-6.88135.907
17ii_U639A640:C24A25_ii-1.253-0.782.85817.7220.0628.419-1.3664.4471.7890.111-32.4233.395
19ii_U641U642:A22G23_ii-0.657-2.3223.0990.6081.30426.148-5.4531.6022.9662.879-1.34426.187
110ii_U642A643:U21A22_ii0.419-1.9733.7395.8913.60628.345-6.1270.3362.58225.683-11.11831.917
1221ii_U656U657:A1140A1141_ii0.15-0.9962.8985.5172.17640.787-1.6230.3132.8393.102-7.86641.198
1277ii_U795U796:A861U862_ii-0.915-1.5094.198-6.97911.840.02-3.6090.3763.7316.669.85342.211
1278ii_U796U797:A860A861_ii-0.014-1.5523.455-0.5117.73628.107-4.765-0.0832.93215.5591.02829.136
1279ii_U797A798:U859A860_ii0.097-1.3643.0081.58616.78930.942-4.3220.0342.02628.933-2.73435.141
1282ii_U800U801:A854G855_ii2.071-1.2713.31818.5117.5818.02-6.1560.1362.44338.113-40.12931.161
1283ii_U801U802:U853A854_ii-1.490.3653.729-18.8023.2643.0720.124-0.0634.0314.20324.2446.925
1284ii_U802G803:C852U853_ii0.088-2.3373.7483.92920.01229.39-6.5550.3931.83334.677-6.80735.644
1286ii_U811A812:U844A845_ii-0.229-1.5363.7423.84215.9131.984-4.8710.9462.66326.794-6.47135.831
1145ii_U888U889:A232A233_ii0.087-1.4643.5832.83114.81426.268-5.7730.42.42529.688-5.67430.224
1146ii_U889G890:C231A232_ii0.327-1.5473.565-1.15317.7235.232-4.376-0.6222.52227.2451.77339.328
1149ii_U892U893:A228A229_ii1.248-2.084.002-8.21127.42833.602-5.352-2.4391.60739.69811.88443.876
1150ii_U893U894:A227A228_ii-1.06-2.3292.4430.187-9.8316.282-2.2583.33.282-31.267-0.59419.003
1151ii_U894U895:A226A227_ii1.404-2.3894.004-8.22-7.9339.423-2.326-3.1314.032-11.46611.88640.981
1152ii_U895C896:A882A226_ii3.091-2.7743.4881.158-0.37868.714-2.442-2.6923.547-0.334-1.02668.723
1232ii_U913U914:G674A675_ii-0.28-2.2142.41812.097-1.26531.785-3.6391.9092.249-2.212-21.14433.977
1233ii_U914U1017:A916G674_ii-3.272-4.527-0.15-153.508-81.102102.75-2.0311.1953.006-40.87777.371176.016
1250ii_U935U936:U998U999_ii0.443-1.7023.6537.3246.23630.447-4.3260.6373.26511.518-13.52731.896
1251ii_U936C937:G981U998_ii-0.701-2.0254.110.6125.48531.45-4.881.4093.69910.022-1.11831.919
1254ii_U939A940:G978A979_ii0.66-1.7683.508-0.46314.31831.781-5.06-1.1722.49624.6420.79634.784
1256ii_U941U942:A976A977_ii0.696-0.9493.202-1.9756.75839.134-2.142-1.2432.9679.992.9239.738
1257ii_U942G943:C975A976_ii0.826-1.5942.656-6.49310.16327.214-4.602-2.5641.72520.37713.01829.72
1264ii_U950U965:G967A968_ii4.98-0.2065.1333.1255.10780.35-0.371-3.7225.2723.953-2.41980.536
1234ii_U1017A918:U1018A916_ii0.2133.7533.034-160.59475.562-139.05-2.083-0.3332.352-37.815-80.369-179.119
1224ii_U1021C1022:A669G670_ii-1.211-1.7543.0226.096-3.95853.215-1.7141.6942.99-4.396-6.76953.673
1302ii_U1034C1035:G1072A1073_ii-0.886-2.123.9851.93723.08229.212-6.4251.6511.82238.964-3.26937.124
1306ii_U1042C1043:G1067U1068_ii-0.411-1.1693.6671.838-1.05845.133-1.4150.723.673-1.378-2.39345.18
1220ii_U1084U656:A1141A1146_ii-4.056-2.022-0.9017.975-162.089-68.140.246-2.083-2.01184.9084.178-165.344
1333ii_U1110U1111:C1114A1115_ii3.3110.7313.1674.06649.392165.750.284-1.6593.21524.865-2.047167.068
1330ii_U1132U1133:A1144G1092_ii0.44-0.7333.71917.109-5.436123.214-0.361-0.0793.76-3.082-9.701123.971
1331ii_U1133G1136:C1143A1144_ii-0.8190.2286.1927.38413.4431.138-4.23311.06-0.40138.74-78.91930.526
1338ii_U1168A1169:U351A1184_ii0.576-4.0683.837-12.8618.264.826-12.066-2.719-2.75863.7444.8922.843
1340ii_U1170G1171:U1182G1183_ii-2.522-0.3182.9533.99918.61249.736-1.3893.0472.49921.252-4.56653.038
1343ii_U1173U1174:A1179G1180_ii-0.144-1.9433.5241.16212.61728.182-5.9990.4872.44224.411-2.24830.847
1344ii_U1174G1175:A1178A1179_ii-3.003-1.4262.88-11.5113.56244.314-2.1332.8793.44.62214.93545.844
122ii_U1197U1198:A1692G10_ii1.043-1.7162.6040.402-3.28527.764-2.907-2.082.798-6.814-0.83327.957
123ii_U1198G1199:C1691A1692_ii0.448-1.6483.28315.13130.22225.259-4.9290.690.99648.517-24.2941.972
1352ii_U1238G1515:C1233U1234_ii3.0462.640.227-79.989157.297-172.757-1.3261.520.165-78.652-39.996-179.777
1364ii_U1239U1240:G1251U1490_ii2.655-2.9593.797-0.724-2.453-10.47320.03512.8673.19513.182-3.888-10.78
1365ii_U1240G1241:C1250G1251_ii-0.229-1.9093.39-0.3119.82726.45-6.0680.4032.53320.5940.65228.188
1377ii_U1284U1285:U1306C1307_ii-0.771-2.2283.714-3.2463.46827.588-5.5170.7423.4797.2046.74327.986
1378ii_U1285G1286:C1305U1306_ii-0.91-1.8263.7026.679.50737.898-3.8632.1612.98114.235-9.98839.575
1384ii_U1319G1320:U1500U1501_ii-0.847-0.8912.7515.2689.02236.848-2.261.8192.33813.933-8.13538.251
1389ii_U1325A1328:U1495G1496_ii1.073-2.3713.2397.10510.514.031-11.804-0.1711.50135.023-23.718.889
1391ii_U1329G1330:U1492A1494_ii-1.265-2.054.3152.96213.7638.041-4.8212.2293.30520.282-4.36740.471
1397ii_U1335U1336:A1482A1483_ii-0.291-1.582.7117.9415.2625.245-4.4252.1862.15411.525-17.39926.955
1398ii_U1336C1337:U1481A1482_ii2.394-2.0760.521-89.782-139.2152.66-0.743-1.3990.632-72.94947.048167.146
1401ii_U1342U1343:A1378A1379_ii-0.474-2.4232.801-2.524-2.95920.946-5.4430.3333.143-8.056.86621.3
1402ii_U1343G1344:G1377A1378_ii-1.067-2.072.8669.8840.60319.888-5.5585.7382.0461.622-26.59122.195
1405ii_U1346G1347:U1356A1375_ii1.538-1.8232.97-0.47514.35736.631-4.096-2.3352.11721.8390.72239.257
1413ii_U1386C1387:G1475A1476_ii0.011-1.8683.296-3.7723.20129.881-4.209-0.7663.0596.1547.25230.279
1420ii_U1396A1397:U1441A1442_ii1.073-1.1662.739-4.92721.87315.182-5.966-3.0790.41654.9412.37627.023
1425ii_U1403U1404:A1434A1435_ii-0.948-1.2443.21-1.6374.14135.435-2.6071.3173.0896.772.67635.704
1438ii_U1453G1454:C1464A1465_ii0.448-1.743.0-5.22913.46828.587-5.096-1.5651.925.3349.83531.962
1362ii_U1525A1526:G1223A1224_ii-0.001-3.0512.84115.2685.70727.123-6.442.2271.90710.999-29.42531.565
1446ii_U1534G1535:C1588A1589_ii0.331-1.3892.286-1.5134.17929.768-3.247-0.8442.0578.0772.92530.09
1450ii_U1544G1545:C1577C1578_ii0.645-1.6073.602-17.7313.71425.847-3.669-4.5632.4277.27534.72831.475
1454ii_U1555A1556:C1569G1570_ii-3.976-1.3182.579-0.96914.2418.877-6.4759.4881.4437.2752.53823.627
1464ii_U1603C1604:A1625U1626_ii0.198-0.9663.361-1.8098.94638.122-2.508-0.5113.05413.4622.72239.159
1471ii_U1611A1656:A1615U1619_ii-3.1554.0142.8289.535163.189169.7411.8751.5853.15581.627-4.769178.527
1347ii_U1637U1638:A1219G1220_ii-2.286-2.5783.669-8.2992.6196.594-19.055-5.4143.33715.92550.46210.915
1348ii_U1638C1639:G1218A1219_ii0.04-0.8212.8081.974.86337.671-1.7820.1512.6847.487-3.03338.022
1475ii_U1648G1649:C1665G1666_ii0.151-1.312.5620.60110.9720.181-5.949-0.2351.6428.719-1.57422.951
1486ii_U1702C1703:G1820U1821_ii1.541-2.1013.979-9.9211.88347.168-3.478-2.6493.03514.40312.02449.505
1487ii_U1706A1707:U1815A1816_ii-0.494-1.4262.411-2.0050.31727.781-3.0180.6712.4240.6594.16927.854
1490ii_U1709A1710:A1812A1813_ii0.643-1.5293.1463.94411.63719.041-7.511-0.4141.98431.305-10.61122.631
1496ii_U1715G1717:U1806A1807_ii1.937-3.4994.3154.0047.8026.818-29.783-4.0050.89346.446-23.83411.104
1500ii_U1720G1721:U1802A1803_ii0.22-1.5263.0283.53511.31926.024-5.2520.2272.19723.636-7.38128.555
1503ii_U1723U1724:G1799A1800_ii0.928-2.1174.11811.03114.36340.173-4.4610.0113.34219.743-15.16343.912
1504ii_U1724U1725:U1798G1799_ii-2.03-1.5553.811-15.68910.02315.553-7.841-1.6343.12627.16742.52424.216
1505ii_U1725A1726:U1797U1798_ii1.458-1.7473.1571.49810.9837.58-3.797-2.0152.61816.607-2.26639.123
1508ii_U1728G1729:A1794A1795_ii-0.665-1.0533.4085.0448.84157.095-1.5640.9593.1649.17-5.23257.92
1519ii_U1741C1742:G1781A1782_ii-0.597-1.7863.463-9.01614.10124.613-6.317-0.6472.22429.16118.64529.692
1528ii_U1833U1834:A1853A1854_ii0.572-1.252.7311.5911.5231.037-2.572-0.8142.6942.836-2.96931.113
1529ii_U1834C1835:G1852A1853_ii0.546-1.2853.28711.7528.93236.87-2.9310.5562.94413.479-17.73439.619
1533ii_U1838A1839:U1848G1849_ii0.366-1.4382.6292.53117.52520.983-5.887-0.361.14640.128-5.79627.392

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.