A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: NA2536  PDB ID: 4LFC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
1482AA_4OC1402UR31498:A1499A1500_AA3.041-3.1190.037-164.131-40.876-57.0411.7080.9531.94621.122-84.812-170.465
1484AA_5MC1404G1405:C1496G1497_AA-0.766-1.3072.5288.1782.68714.573-5.6356.2331.6059.577-29.15116.913
13AA_A10G11:C23U24_AA-0.299-1.6763.3691.2618.80231.272-4.4780.7472.79315.928-2.28232.481
131AA_A32A33:U551U552_AA0.389-1.2722.9862.456.0338.946-2.516-0.322.7858.968-3.64439.466
132AA_A33C34:G550U551_AA-0.109-1.643.545-0.0616.7932.999-3.9770.1783.15511.7980.10633.671
141AA_A55G57:C355U368_AA5.411-0.9385.538-8.724-2.357170.002-0.466-2.7345.503-1.1834.379170.034
142AA_A60G61:C106G107_AA-2.983-2.6583.35384.355-123.596118.556-0.6181.9993.164-63.492-43.334164.624
159AA_A109A327:U323G324_AA-1.99-0.3022.819-9.852-4.315-4.8284.254-16.042-0.61626.44-60.36-11.786
180AA_A119C240:G286U287_AA1.655-2.1063.08-1.3820.13588.077-1.517-1.2183.0570.0970.99488.086
1101AA_A140A141:U222U223_AA0.595-1.6573.1392.4267.35225.008-5.452-0.7242.59916.481-5.43826.161
1102AA_A141G142:C221U222_AA-0.104-2.0363.7049.5247.2335.206-4.2341.5273.10911.549-15.21437.12
1104AA_A143G198:C219G220_AA-2.445-3.1913.4765.7873.38944.181-4.5043.7372.914.475-7.64144.662
1125AA_A149C150:A171A172_AA-1.212-0.5373.275-12.277-5.29827.6360.13-0.3623.528-10.35824.00130.644
1127AA_A151A152:C169U170_AA0.66-2.33.644-3.8954.17947.211-3.215-1.1563.3795.1954.84347.536
1128AA_A152C153:G168C169_AA4.501-2.0993.267-2.95516.57650.324-3.289-5.2192.26918.8953.36952.892
185AA_A243A246:G281A282_AA4.628-0.163.8173.563-10.6798.62913.406-14.0623.609-49.938-16.66214.176
160AA_A327A329:C322U323_AA0.588-1.9083.481-3.5384.92842.817-3.085-1.1543.1976.714.81743.225
161AA_A329G332:A321C322_AA2.844-1.1943.372.989-3.3269.524-0.92-2.3773.521-2.909-2.61869.649
168AA_A338C339:G350G351_AA1.287-1.2332.949-1.6925.55724.803-4.149-3.3312.52412.7163.87225.464
1150AA_A383G384:C379G380_AA2.719-2.013.58.0999.90746.764-3.282-2.6393.4312.215-9.98748.389
1155AA_A389C390:G371U375_AA6.4790.1673.6622.123-23.01685.9310.677-4.5953.67-16.63-1.53488.397
1159AA_A393G394:C366U367_AA3.641-3.5793.024-11.484.35.969-15.226-15.736-2.86522.49560.0613.629
1188AA_A430A431:U429A411_AA-0.027-1.4764.118-4.86720.196-45.464-0.262-0.5184.347-24.671-5.945-49.756
1189AA_A431A432:G410U429_AA1.7591.8562.629-5.101-15.89786.3641.598-1.3522.246-11.5243.69887.65
1190AA_A432C433:G409G410_AA0.68-0.6563.409-3.049.79459.867-1.135-0.8243.2419.7363.02260.659
1197AA_A439A440:G494U495_AA6.131-0.8853.1293.591.68428.891-2.149-11.3473.793.355-7.15329.156
1198AA_A440C442:G492G494_AA1.577-0.63.0220.7568.62659.55-0.988-1.542.9368.635-0.75760.119
1205AA_A448C449:G484U486_AA-0.711-0.9142.91910.042-9.501-87.9720.83-0.3212.8836.8057.193-88.831
1207AA_A452A453:C479U480_AA0.101-1.1933.215-7.72-10.69138.746-0.499-1.023.338-15.57511.24740.847
1208AA_A453C454:A478C479_AA1.591-1.2413.09710.6849.55533.347-3.303-1.0992.99715.776-17.6436.216
1170AA_A499G500:C545U405_AA-1.41-2.5616.60813.488-91.46865.111.9171.3836.12-62.057-9.151108.664
1181AA_A520G521:C528A533_AA4.288-2.722.5929.10826.677-27.7792.0596.680.462-37.98641.448-47.955
1217AA_A563G567:C883U884_AA-0.809-3.330.805115.36-125.4437.264-0.9111.1042.061-65.117-59.884170.924
1235AA_A583G584:U757G758_AA0.001-0.7813.273-5.1414.9754.71-1.135-0.3023.1855.3825.56755.139
1290AA_A611C612:G628G629_AA0.766-1.5833.6861.76812.86340.683-3.556-0.8643.09917.958-2.46942.621
1293AA_A614C615:G625U626_AA0.145-1.1073.0655.5163.20833.842-2.3330.552.9375.451-9.37234.421
1238AA_A632G633:U605G606_AA0.356-1.1183.006-7.8313.20554.344-1.384-0.8072.8693.4858.51654.949
1246AA_A640A642:U641U598_AA-2.289-0.6611.91526.8912.09623.697-1.4174.421-0.60221.347-47.45537.663
1247AA_A642C643:G597U641_AA-2.091-0.4531.992-0.3986.38741.253-1.0412.9111.9238.9990.56141.725
1253AA_A648G649:C590U591_AA0.232-1.9653.232-2.0448.77328.528-5.446-0.8312.50817.2664.02429.888
1259AA_A655C656:G750U751_AA0.35-2.0943.020.607-1.17327.617-4.116-0.5953.112-2.456-1.27127.648
1267AA_A663G664:G741G742_AA-0.457-1.7943.1310.248-0.83229.872-3.3130.9373.175-1.615-0.4829.884
1278AA_A675A676:G714A715_AA0.406-0.9473.332.31411.90437.315-2.811-0.3342.92418.03-3.50439.169
1279AA_A676U677:G713G714_AA0.076-1.0522.895-4.2056.84719.905-5.131-1.6182.34118.84611.57421.45
1287AA_A684G685:U705A706_AA-1.42-1.3023.5822.32519.35551.453-2.6071.6862.89521.437-2.57554.786
1300AA_A722G724:A665A733_AA1.8252.842.428-105.776140.311-160.127-1.580.7922.19-70.181-52.907-179.261
1257AA_A753G654:C754U652_AA-2.302-2.558-2.661154.548-43.375-91.1761.095-1.848-0.85522.43179.921-166.401
1304AA_A768G769:C810C811_AA-0.145-1.4783.667-5.388.99348.72-2.471-0.2553.35910.7586.43549.767
1312AA_A780A781:U801A802_AA-5.462-0.5243.293-9.82310.104-0.0512.503-21.905-3.42-64.385-62.593-14.092
1313AA_A781A782:G800U801_AA6.095-1.343.1172.2357.08131.512-3.622-10.5553.16312.816-4.04532.353
1314AA_A782C783:G799G800_AA0.884-0.6723.64-4.0218.91166.674-0.984-0.9683.4858.0623.63867.305
1319AA_A787U788:A794C795_AA0.534-1.1633.0-2.9855.90439.055-2.331-1.0982.7568.7554.42639.59
1329AA_A860G861:C868G869_AA0.282-0.7842.948-3.177-1.42655.887-0.762-0.4642.947-1.523.38655.987
1335AA_A889U891:A907A908_AA2.37-2.0930.639118.218126.492-153.5780.9941.2340.602-63.31259.171-178.432
1337AA_A892C893:U244G906_AA-3.415-1.7192.523-4.59511.69331.959-4.3025.2492.23220.2847.97234.279
16AA_A914U13:U20G21_AA-0.5820.1622.8880.725-6.928.9489.5013.8582.146-37.725-3.95111.331
110AA_A918A919:A16U17_AA0.423-1.373.3757.0463.07737.397-2.4950.2683.2794.738-10.84938.151
111AA_A919U920:G15A16_AA-1.286-1.9843.508-4.635.54328.146-5.2321.4993.23211.1679.32729.04
115AA_A923C924:G1392U1393_AA0.735-1.293.1438.73210.3231.791-3.6730.0262.7117.864-15.11634.478
125AA_A935C936:G1379U1380_AA0.374-2.3553.0291.534.98925.48-6.416-0.4692.54711.162-3.42226.0
1365AA_A978A1319:U1315G1316_AA-2.905-2.502-2.785157.976-57.2924.911-1.975-0.52-2.437-30.242-83.392168.326
1380AA_A986G987:C1218U1219_AA1.224-0.7913.295-0.3548.84535.768-2.428-1.9853.00914.1350.56636.812
1390AA_A1001G1003:C1039U1040_AA-1.268-2.4093.851-3.77819.0933.057-6.1181.4542.29930.4886.03338.222
1404AA_A1055U1056:A1204U1205_AA0.044-1.2572.9882.331.59147.54-1.6720.1162.9461.971-2.88847.619
1437AA_A1123G1124:C1149U1150_AA-0.532-0.0783.3656.81120.5129.063-3.0781.8392.58535.361-11.74336.078
1443AA_A1157C1158:G1181G1178_AA-2.7325.517-3.402-19.4195.16724.33310.7627.241-0.09110.338.70831.461
1431AA_A1179C1118:G1155G1156_AA2.0542.2511.202-123.167122.406-24.745-1.5060.6470.131-62.962-63.353-173.795
1385AA_A1213G993:C1045A1046_AA-1.961-4.967-0.496137.96480.9646.065-1.372-0.964-4.22645.281-77.159159.995
1352AA_A1225C1226:G954U955_AA-1.411-0.8483.241.9996.36338.883-1.9792.3182.9969.474-2.97639.429
1355AA_A1229C1230:G951U952_AA-0.899-2.0162.840.994-3.37821.803-4.092.6923.069-8.857-2.60722.082
1362AA_A1236C1237:G1337G945_AA0.4440.2452.5663.6812.0318.347-0.1090.1972.6156.26-11.35318.819
1451AA_A1238A1239:A1299U1301_AA0.468-2.0923.3862.3198.079-90.2531.3020.3783.514-5.691.633-90.559
1452AA_A1239C1297:C1298A1299_AA0.92-4.3872.8810.538-5.231-55.1054.891.4542.2915.58411.247-56.25
1457AA_A1245C1246:G1291U1292_AA0.86-1.5593.2912.1677.33136.233-3.412-1.0722.97511.628-3.43837.004
1460AA_A1248C1249:A1288A1289_AA-0.886-0.5742.792.53-1.17525.665-1.0082.5782.714-2.635-5.67525.814
1461AA_A1252G1253:C1284A1285_AA0.488-0.9773.303-0.573-1.194108.224-0.587-0.3083.309-0.7370.353108.23
1366AA_A1319G1323:C1314U1315_AA3.167-1.6312.753-7.8621.73266.74-1.528-3.1032.3721.5687.1267.168
1368AA_A1324C1325:G1312U1313_AA0.934-1.3873.4020.960.07136.982-2.196-1.3383.4210.112-1.51336.995
1373AA_A1329U1330:U1307U1308_AA0.336-1.6813.084-2.1360.67333.569-3.007-0.9073.0241.1633.69433.642
1376AA_A1332A1333:G1304G1305_AA-0.957-0.0512.788-12.9393.4229.894-0.632-0.3452.926.25123.64732.69
1377AA_A1333G1334:C1303G1304_AA0.651-0.4913.373-4.496.10567.842-0.672-0.7533.285.4524.0168.213
1343AA_A1339A1340:U943G944_AA1.577-0.7273.3781.3364.37861.125-0.927-1.4823.3544.298-1.31261.28
1344AA_A1340U1341:G942U943_AA0.808-1.7873.2995.538-1.41839.234-2.464-0.5223.437-2.098-8.19439.632
1471AA_A1349A1350:U1372G1373_AA0.037-0.5273.344-7.6476.21164.95-0.745-0.3523.2665.7497.07865.612
1472AA_A1350U1351:G1371U1372_AA0.377-1.4073.1242.9149.49739.067-3.024-0.2472.74213.929-4.27540.262
1479AA_A1357U1358:A1363G1365_AA0.3010.4843.77119.46216.321103.1990.0390.1263.80810.309-12.293105.405
1491AA_A1413U1414:G1486G1487_AA-0.119-1.4453.113-3.187-4.6131.454-1.803-0.3543.282-8.4215.8231.937
1496AA_A1418G1419:U1481G1482_AA0.995-0.8613.233-1.9474.9253.512-1.25-1.2193.1135.4492.15653.754
1506AA_A1428C1429:G1471U1472_AA-0.031-1.1663.291-3.2747.3835.306-2.887-0.3972.98611.9755.31236.189
1509AA_A1434G1435:C1466G1467_AA0.0280.0683.9813.87623.31364.044-1.0370.1583.80521.24-3.53167.827
1520AA_A1507G1508:C1527U1528_AA0.5-1.1282.619-4.6714.05626.296-3.204-1.9772.38.76310.09127.001
1526AA_A1513C1514:G1521U1522_AA-0.497-0.8813.022-3.3942.6726.487-2.5320.2662.9595.7787.34526.83
133AA_C34G35:C549G550_AA-0.505-1.7472.964-3.39112.56230.03-4.8760.4212.12622.9376.19232.668
135AA_C36U37:A397G548_AA-0.907-2.1982.9373.255-0.973117.133-1.2790.5612.932-0.57-1.907117.164
145AA_C63G66:C103G104_AA-2.781-1.6593.211-12.1574.06450.668-2.1732.3083.614.66413.9552.16
147AA_C67G68:A101G102_AA-1.169-1.9513.15412.571-3.36126.746-3.1544.7252.578-6.78-25.35729.692
151AA_C73C74:G96G97_AA-0.177-1.5153.0915.7497.84930.873-3.951.2192.56514.305-10.47732.335
152AA_C74G75:U95G96_AA0.657-2.4184.0190.40816.66814.306-12.157-1.5830.81549.629-1.21421.936
154AA_C76G77:C92G93_AA0.227-1.9263.46-7.0825.24530.465-4.498-1.7262.979.72913.13531.685
187AA_C123G124:C237G238_AA-0.04-1.6313.396-2.49114.21334.13-4.384-0.2552.53722.9844.02836.971
194AA_C131C132:G230G231_AA-0.766-2.2483.383.876-2.85719.136-5.1094.2083.453-8.423-11.42819.727
195AA_C132U133:U229G230_AA0.5-1.2953.46-2.4410.11235.812-3.372-1.1072.95916.0323.86937.245
197AA_C136C137:G226G227_AA-0.211-2.1733.1870.24810.45130.97-5.4430.4132.34818.908-0.44932.646
198AA_C137G138:C225G226_AA-0.578-1.6633.244-8.0090.34629.057-3.271-0.5453.2640.67315.59230.12
1126AA_C150A151:U170A171_AA0.3620.2893.1764.893-3.6165.21612.49511.5212.159-29.381-39.7518.012
1129AA_C153C154:G167G168_AA-0.296-1.583.7210.95111.74536.932-3.9220.5713.08717.987-1.45738.704
1130AA_C154C155:G166G167_AA0.54-1.9953.2920.1289.12426.746-6.022-1.0812.49219.033-0.26728.232
1131AA_C155G156:C165G166_AA0.486-2.2013.1473.6629.12621.349-7.998-0.1552.09423.119-9.27623.481
1117AA_C193C194:G183G184_AA-0.454-2.2263.286-6.2753.00129.132-4.922-0.4013.0755.86212.25629.934
1118AA_C194G181:U182G183_AA0.499-3.194-3.915-135.31-100.23-174.8951.5450.32-3.97850.119-67.659-179.484
181AA_C240C241:G285G286_AA-0.104-2.0723.2670.0649.41229.204-5.5950.2082.49318.083-0.12330.651
182AA_C241C242:G284G285_AA0.063-2.0573.3770.6797.31230.128-5.2030.0082.81213.811-1.28230.99
183AA_C242C245:C283G284_AA-0.157-1.3573.367-0.346.05363.217-1.5590.1353.2395.760.32363.477
184AA_C245A243:A282C283_AA-2.758-0.9682.9275.5213.5452.516-11.90228.735-1.60737.306-58.17.027
1136AA_C248U249:G275G276_AA0.326-2.1363.3762.3430.68832.822-3.892-0.1633.3461.215-4.13932.91
178AA_C290C291:G309G310_AA1.365-2.1633.2166.7235.83725.844-5.983-1.2752.92312.583-14.49527.31
179AA_C291G292:C308G309_AA0.186-1.4473.7385.66516.65341.123-3.5480.3132.96722.509-7.65744.577
1148AA_C295U296:G301G302_AA0.385-1.6563.144-0.8390.43340.039-2.466-0.6543.1180.6331.22540.049
164AA_C334C335:G318G319_AA0.059-1.5943.21-0.28613.91128.371-5.196-0.1552.20626.4650.54431.536
165AA_C335C336:G317G318_AA-0.431-1.6343.309-0.97711.57531.839-4.5450.5942.58620.2751.71233.84
166AA_C336C337:G316G317_AA0.659-1.9813.554-2.30116.22436.672-4.68-1.2162.45324.3493.45440.051
167AA_C337A338:G351G316_AA-0.471-1.8693.2674.09212.70939.381-3.8671.0612.51318.234-5.8741.497
169AA_C339U340:A349G350_AA-0.652-1.5643.115-4.19410.93425.179-5.5690.4762.32323.5279.02427.73
171AA_C341C342:G347G348_AA-0.396-2.4163.3532.9825.54523.785-7.2661.7872.6613.161-7.07824.593
172AA_C342U343:G346G347_AA-1.197-0.8623.87612.03811.36498.342-0.7761.0083.6657.471-7.91499.369
1152AA_C385C386:G377G378_AA0.891-2.1222.828-0.0711.97722.396-7.278-2.0431.5128.3770.16725.362
1153AA_C386U387:G376G377_AA0.55-1.6083.23112.9714.30132.837-3.2630.9833.0027.23-21.80535.494
1156AA_C390G391:C370G371_AA-0.283-1.4913.322-5.20615.37633.395-4.27-0.2062.44325.0058.46637.03
1161AA_C395G396:U45G46_AA0.115-1.0983.0820.27716.9732.481-3.784-0.1512.25528.077-0.45936.542
1163AA_C398G399:C43G44_AA-0.633-1.8714.144-7.85815.04531.663-5.576-0.2953.04525.41813.27635.822
1165AA_C400C401:G41G42_AA0.603-1.5233.1046.8927.66132.051-3.78-0.0092.74513.447-12.09733.626
1166AA_C401G402:C40G41_AA-0.001-1.7733.055-11.9811.21526.711-5.066-1.8961.99421.85223.34331.271
1168AA_C403U404:U498G39_AA-2.216-3.1643.337-4.1413.07662.008-3.5621.9362.81612.533.96763.359
1191AA_C433U434:A408G409_AA-0.467-1.4323.956-4.27314.73335.206-4.2850.1033.16423.0556.68638.305
1193AA_C435C436:G406G407_AA-0.124-1.83.0091.9176.55330.625-4.3950.542.56612.217-3.57531.359
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1399AA_G1047G1048:C1209C1210_AA0.099-2.2423.539-0.01712.16730.719-5.927-0.1782.49521.9180.03132.987
1400AA_G1048G1050:C1208C1209_AA-0.191-1.9163.6121.888-2.14235.8-2.7650.6123.702-3.478-3.06535.91
1401AA_G1050C1051:2MG1207C1208_AA-0.73-1.7873.325-0.578.12334.765-4.0441.1122.85913.3680.93835.677
1406AA_G1057G1058:U1199C1203_AA3.6610.3253.399-2.05112.62660.699-0.289-3.6583.28912.3462.00561.906
1407AA_G1058C1059:G1198U1199_AA0.441-0.7332.688-1.51112.96732.972-2.695-0.92.2321.8122.54135.396
1410AA_G1061U1062:U1194C1195_AA0.204-0.9063.443.3151.56841.357-1.4530.0823.4112.216-4.68341.512
1413AA_G1064C1066:A1191C1192_AA-1.7442.8580.555-123.333-120.7993.0151.3690.938-0.739-62.90864.227172.639
1414AA_G1068C1069:G1106C1107_AA-0.102-1.7673.078-1.4372.9231.227-3.768-0.062.9065.4062.6631.392
1418AA_G1072U1073:A1102C1103_AA0.577-1.0853.1715.6058.31436.834-2.659-0.212.92112.867-8.67438.128
1420AA_G1074C1075:G1082U1083_AA-0.466-1.1252.861-0.13.93736.334-2.2590.7312.736.2910.1636.539
1424AA_G1087G1088:C1097C1098_AA0.091-1.3113.089-2.40511.97237.99-3.152-0.3812.56717.8363.58239.835
1425AA_G1088G1089:C1096C1097_AA-0.164-1.9983.4964.3558.99635.08-4.4370.8632.87414.564-7.0536.433
1426AA_G1089U1090:U1095C1096_AA1.11-1.3012.56-4.9564.55529.743-3.135-2.832.1338.7349.50230.479
1434AA_G1120U1121:A1152C1153_AA-0.541-1.2333.064-1.04-0.98837.636-1.790.713.107-1.5311.61237.662
1438AA_G1127C1128:G1143C1145_AA-0.005-1.9375.124-6.36626.59537.428-5.7-0.7653.12536.158.65346.063
1441AA_G1133G1134:C1140C1141_AA-0.157-2.03.206-5.6910.45532.111-4.876-0.5352.44618.149.87334.191
1442AA_G1134U1135:G1138C1140_AA-0.057-1.7853.3940.474-5.44597.726-1.090.0463.465-3.613-0.31597.84
1445AA_G1160C1161:G1175A1176_AA1.355-2.0032.959-5.3776.91939.787-3.514-2.4412.39610.027.78640.703
1449AA_G1164C1165:G1171C1172_AA0.157-1.6452.9755.9760.84933.428-2.9410.62.9171.461-10.28433.953
1357AA_G1231U1232:A949U950_AA-0.081-1.2333.2911.5218.6140.173-2.6640.2752.97112.358-2.18341.075
1359AA_G1233C1234:G947C948_AA-0.767-1.2783.15-0.8040.09137.003-2.0261.1033.1620.1431.26737.011
1462AA_G1253C1254:G1283C1284_AA0.254-1.3163.1130.28-0.3631.213-2.381-0.4223.13-0.669-0.51931.216
1464AA_G1258C1259:G1276C1277_AA-0.847-1.4463.405-5.5355.31533.056-3.3580.5373.2359.1889.56833.911
1367AA_G1323A1324:U1313C1314_AA0.06-1.1183.1715.8446.0133.724-2.7410.7432.90410.166-9.88534.721
1375AA_G1331A1332:G1305A1306_AA-1.587-1.7075.14-2.449-11.449-17.22111.581-5.8633.14533.643-7.196-20.799
1347AA_G1343C1344:G939C940_AA0.083-0.9383.106-7.019.87335.618-2.632-0.9632.69715.59511.07237.557
1475AA_G1353C1354:G1368C1369_AA-0.034-1.9133.655-4.65-4.5539.264-2.205-0.5713.824-6.7156.86339.779
1477AA_G1355G1356:C1366C1367_AA-0.439-1.2593.8410.6857.68140.985-2.6940.6993.55210.854-0.96741.673
1478AA_G1356A1357:G1365C1366_AA-1.235-1.2333.058-1.9220.03535.058-2.051.7763.1180.0583.18835.109
1481AA_G14014OC1402:A1500C1501_AA1.586-1.7762.9413.6552.10635.832-3.139-2.0912.9783.408-5.91636.072
1485AA_G1405U1406:U1495C1496_AA-0.536-1.6843.306-1.7168.34420.379-7.330.7972.46722.3644.622.071
1488AA_G1410C1411:G1489C1490_AA-0.589-1.3793.268-7.2174.88533.84-3.031-0.13.1018.22412.14934.912
1493AA_G1415G1416:C1484U1485_AA-0.822-1.8453.152-11.8511.5935.325-3.099-0.2773.1732.53218.87437.233
1494AA_G1416G1417:A1483C1484_AA-1.147-1.0723.4298.2228.667.782-1.2731.3253.157.651-7.31568.696
1495AA_G1417A1418:G1482A1483_AA0.551-1.23.2890.844.55-23.7051.3621.5953.434-10.9442.021-24.146
1497AA_G1419C1420:G1480U1481_AA0.315-1.6393.2690.1024.5536.777-3.172-0.4833.0527.178-0.16237.048
1499AA_G1421G1422:C1478C1479_AA1.007-1.9653.1822.3564.59432.618-4.193-1.3962.9498.115-4.16233.014
1500AA_G1422G1423:C1477C1478_AA-0.053-2.0043.1451.1283.1631.208-4.2590.2952.935.853-2.0931.384
1501AA_G1423C1424:G1476C1477_AA-0.868-1.9743.370.4130.91129.193-4.1171.8123.2961.808-0.81929.21
1510AA_G1435U1436:C1465C1466_AA-2.6-0.6822.631-5.7077.97222.22-3.8084.6222.79519.5113.96624.262
1513AA_G1438C1439:G1462C1463_AA-0.235-1.3213.123-1.8083.31133.857-2.7490.1322.9925.6643.09334.06
1516AA_G1441G1447:C1459A1460_AA-3.5251.0133.2581.9424.88534.1120.9596.243.1688.266-3.28734.503
1517AA_G1447C1448:G1455C1459_AA-0.445-2.0293.205-0.6773.75138.141-3.5380.5973.0075.7221.03238.324
1521AA_G1508C1509:G1526C1527_AA0.123-1.7753.2884.9875.22829.846-4.3450.7122.9249.967-9.50930.689
1524AA_G1511U1512:G1523C1524_AA0.397-1.1873.1511.87612.73138.533-3.009-0.3822.6618.667-2.75140.548
15AA_U12A914:G21G22_AA-1.823-3.3632.951-8.6258.0376.229-20.6511.2450.53442.43545.53613.329
17AA_U13G916:C19U20_AA1.641-2.9223.731-8.37612.14483.641-2.472-1.4273.229.0446.23884.696
130AA_U30A32:U552A553_AA-0.805-1.0783.271.71213.19633.217-3.5431.5452.62322.016-2.85735.714
136AA_U49G361:C47U365_AA3.2881.7212.017100.414-146.855-29.688-0.1892.1030.09674.07150.647-177.973
144AA_U62C63:G104G105_AA-0.154-2.2222.9411.55912.14921.329-7.9290.7081.46329.861-3.83224.561
175AA_U114G115:C312A313_AA-0.652-1.2343.233-5.34611.46937.403-3.120.3652.81317.2898.05939.413
189AA_U125G126:C235G236_AA0.643-1.5762.9649.11416.45928.576-4.8230.0871.91829.633-16.40934.105
193AA_U129C131:G231G232_AA-0.767-1.8633.2622.184.12446.052-2.711.1563.0565.255-2.77846.275
196AA_U133C136:G227U229_AA-2.862-0.1166.8653.0313.57675.462-0.9232.4956.66811.003-2.45576.545
1112AA_U190JG190K:C188G189_AA-0.88-1.6543.0341.5367.01429.657-4.3511.9372.53713.456-2.94730.495
1114AA_U190LG191:C186C187_AA1.379-1.4613.264-3.74518.27827.731-5.13-2.9341.79133.7296.91133.32
1116AA_U192C193:G184A185_AA0.405-1.9493.7154.4317.67337.169-4.71-0.0882.59825.907-6.49341.252
1137AA_U249U252:A274G275_AA2.169-0.8166.4826.834-98.34316.6324.089-0.1292.533-80.374-21.931102.912
1138AA_U252U253:A273A274_AA-0.652-1.3953.201-7.88522.8637.542-3.740.2092.14531.81310.97344.418
1139AA_U253G254:C272A273_AA-0.064-1.4153.841.22810.83135.591-3.8280.2823.28217.227-1.95237.171
1142AA_U256G257:C269A270_AA1.151-1.1992.748-1.3134.89934.393-2.612-2.0892.5148.2292.20634.753
1147AA_U294C295:G302A303_AA-0.903-1.513.349-6.4658.10331.194-4.0570.4932.99614.57311.62832.831
170AA_U340C341:G348A349_AA0.351-1.5693.474-3.2175.17643.035-2.637-0.7963.247.0144.35943.445
139AA_U358G357:C54A53_AA1.62.654-2.85312.265-1.551-20.082-7.014-0.127-3.0893.99631.597-23.549
138AA_U359U358:A53G52_AA0.1871.511-3.122-2.506-4.17-39.796-2.6470.539-2.9396.098-3.665-40.081
1154AA_U387A389:U375G376_AA-1.412-0.9423.6020.12113.14338.398-2.9162.0543.12319.306-0.17740.505
1169AA_U404A499:U405U498_AA-0.388-2.1682.89-10.91513.15927.987-5.6-0.7631.75424.52720.34332.707
1186AA_U427G428:A415G416_AA3.204-1.18-0.891-58.082-161.771-39.0540.1871.751-0.32583.427-29.954-172.35
1192AA_U434C435:G407A408_AA0.199-1.2443.312-0.54212.10736.239-3.366-0.372.76818.8270.84338.147
1195AA_U437G438:A497A496_AA1.135-0.9762.8427.915-2.4946.004-0.6388.9772.782-16.28-51.6710.239
1177AA_U512C513:G538A539_AA-0.681-1.5493.405-3.21710.94729.826-4.7570.672.73820.3545.98231.888
1234AA_U582A583:G758A759_AA5.866-0.293.1878.195-0.285-1.1241.54827.368-5.3852.85682.161-8.276
1242AA_U636G637:C601A602_AA-0.471-1.6363.2212.472.23923.019-4.7941.9782.9845.574-6.14723.256
1251AA_U646C647:G592G593_AA0.404-1.8692.9651.838.50428.384-5.137-0.472.3416.849-3.62529.661
1263AA_U659G660:C745A746_AA0.437-1.1073.081-4.3966.54635.14-2.634-1.2742.76410.6767.17135.987
1272AA_U669G670:C736A737_AA0.237-1.5042.956-2.9970.24731.043-2.84-0.9532.9090.4615.58431.184
1275AA_U672G673:C717G734_AA-1.169-2.0433.5873.06711.49424.853-6.9573.1692.27824.962-6.66127.513
1280AA_U677U678:A712G713_AA0.323-1.0973.606-10.2869.10641.43-2.409-1.4863.14612.46614.08143.553
1281AA_U678C679:G711A712_AA0.428-1.3812.9383.0140.70336.856-2.262-0.312.9371.109-4.75836.982
1289AA_U686A687:G703A704_AA5.2610.5143.72613.529-10.418-11.4020.93517.865-1.1234.47644.77-20.509
1308AA_U772G773:C806A807_AA0.764-1.8592.80.8619.45624.572-6.004-1.5031.98521.232-1.93426.317
1228AA_U820G570:C866A873_AA-3.076-2.9360.48117.584-173.2156.68-0.0061.6892.634-89.369-9.073174.115
1322AA_U831C832:G854G855_AA-0.392-2.53.183-4.99313.02822.968-8.05-0.1751.60629.48211.29926.825
1324AA_U833C834:G852G853_AA-0.466-2.2893.099-4.80722.49424.618-6.5540.2530.84342.7019.12533.57
1326AA_U835G836:U850G851_AA-0.211-2.9273.0792.87819.75615.158-9.720.918-0.44752.598-7.66325.02
1336AA_U891A892:G906A907_AA5.206-0.8793.296-0.4216.703-12.622-3.21720.5043.476-28.038-1.76-14.291
112AA_U920U921:A1396G15_AA0.585-1.3482.927.73910.0428.657-4.1160.1622.39919.144-14.75731.282
113AA_U921G922:C1395A1396_AA1.098-1.3383.6472.65821.80232.5-4.675-1.3162.39834.485-4.20339.059
1351AA_U960A1225:U955U956_AA3.7830.1150.328-77.805161.154-24.265-0.751.5571.576-80.949-39.082-178.977
1363AA_U961C962:G973A1201_AA1.904-4.2843.5881.624-4.601-22.84612.0735.2292.54711.4474.042-23.354
1387AA_U997G998:C1043A1044_AA-0.06-2.6014.01713.33416.18920.379-8.6142.961.36735.735-29.43429.164
1389AA_U1000A1001:U1040A1041_AA0.194-1.2643.7143.30621.10638.896-3.7650.0682.72229.176-4.5744.177
1396AA_U1012G1013:A1016G1017_AA-1.575-0.5912.87-2.0698.18852.727-1.1121.642.8119.1532.31253.351
1403AA_U1052A1055:U1205G1206_AA1.296-2.4393.386-4.4715.62921.822-8.225-3.6271.13235.60810.18327.152
1405AA_U1056G1057:C1203A1204_AA-0.797-2.1374.0593.7996.29432.192-5.0092.1553.47711.169-6.74232.999
1411AA_U1062C1063:G1193U1194_AA-0.181-1.1933.3977.5533.82324.835-3.6692.4522.9988.576-16.94426.216
1416AA_U1070C1071:G1104A1105_AA-0.257-1.8513.3192.5411.20630.47-3.7460.9893.2142.289-4.82230.597
1419AA_U1073G1074:U1083A1102_AA1.823-1.3963.206-1.02615.11338.784-3.415-2.6682.47121.7741.47841.531
1423AA_U1086G1087:C1098G1099_AA0.496-2.2673.964-6.4551.92939.088-3.609-1.6243.7282.8579.56139.642
1435AA_U1121U1122:A1151A1152_AA0.677-1.3683.5992.47517.28634.298-4.28-0.7162.67427.235-3.89938.368
1436AA_U1122A1123:U1150A1151_AA0.544-1.0813.021-0.70628.01623.534-4.781-0.9471.1450.7291.27936.443
1358AA_U1232G1233:C948A949_AA0.524-2.0593.2851.6288.43531.167-5.088-0.6752.67415.336-2.9632.301
1361AA_U1235A1236:G945A946_AA0.21-2.53.22411.89-1.031.028-4.2071.6513.167-1.789-21.26533.191
1459AA_U1247A1248:A1289G1290_AA-5.236-3.3413.19512.85112.63949.164-4.3636.5281.05414.635-14.8852.171
1374AA_U1330G1331:A1306U1307_AA0.337-0.1732.95211.69515.06953.41-0.9570.2452.82616.194-12.56856.477
1345AA_U1341C1342:G941G942_AA-1.279-2.9533.622-1.3742.7515.092-13.2823.6423.13910.3325.1615.4
1350AA_U1345A1346:A1375U1376_AA-3.766-2.44-3.34312.5632.256141.328-1.281.925-3.5011.195-6.654141.577
1470AA_U1348A1349:G1373A1374_AA5.563-1.1643.623-0.121-0.94-13.5585.96823.373.5833.974-0.513-13.591
1473AA_U1351C1352:G1370G1371_AA0.379-2.1232.88211.4556.7225.966-5.4441.3282.24113.861-23.62729.113
1486AA_U14065MC1407:G1494U1495_AA1.671-2.4564.0910.0298.51848.342-3.724-2.013.63610.308-0.03549.042
1492AA_U1414G1415:U1485G1486_AA0.229-2.253.828-0.39413.15220.039-9.569-0.6751.98433.5261.00323.936
1503AA_U1425C1426:G1474G1475_AA-0.358-2.2732.848-3.188.24721.345-7.8480.0591.88321.1378.1523.083
1505AA_U1427A1428:U1472A1473_AA-0.273-1.2213.1024.48516.83831.725-4.0180.9862.1528.291-7.53536.088
1511AA_U1436C1437:G1464C1465_AA1.492-1.6263.317-5.2559.71834.384-3.89-3.0932.53115.9378.61736.064
1523AA_U1510G1511:C1524G1525_AA-1.049-0.892.863-6.68716.99224.569-4.5210.8782.05234.49213.57330.528
1525AA_U1512A1513:U1522G1523_AA0.212-1.5733.2138.61615.025.745-5.4841.0591.99229.765-17.09630.935
1483AA_UR314985MC1404:G1497A1499_AA0.913-4.451-0.938151.448-74.213111.252-2.239-0.4780.788-37.54-76.609173.601

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.