A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Sep-2019 number of released structures: 10386
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NDB ID: NA2812  PDB ID: 4O3N 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11T_DA5:DT8_P-0.075-0.115-0.264-0.785-4.7072.924
14T_DA8:DT5_P0.206-0.087-0.0344.758-2.460.871
15T_DC9:DG4_P0.231-0.144-0.36711.805-4.8761.654
17T_DC11:DG2_P0.098-0.1020.023-0.663-1.773-1.594
13T_DG7:DC6_P-0.123-0.175-0.362-6.887-2.952-0.626
16T_DG10:DC3_P-0.244-0.1250.0812.896-3.4392.317
12T_DT6:DA7_P-0.043-0.1220.177-0.782-12.5533.636
18T_DT12:DA1_P0.121-0.572-0.2516.047-6.9944.434

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.