A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: NA2817  PDB ID: 4O3S 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11T_8OG5:DC8_P-0.112-0.147-0.303-1.811-12.39-0.286
14T_DA8:DT5_P0.13-0.1670.0164.13-1.5720.081
15T_DC9:DG4_P0.403-0.088-0.31311.487-4.6353.394
17T_DC11:DG2_P0.049-0.090.169-3.914-3.142-0.372
13T_DG7:DC6_P-0.097-0.154-0.359-8.964-4.2380.653
16T_DG10:DC3_P-0.216-0.213-0.09-0.186-3.9382.053
12T_DT6:DA7_P-0.125-0.0970.237-7.505-17.2932.81
18T_DT12:DA1_P-0.089-0.192-0.07317.5290.0853.081

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.