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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID:
NA2817
PDB ID:
4O3S
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
1
T_8OG5:DC8_P
-0.112
-0.147
-0.303
-1.811
-12.39
-0.286
1
4
T_DA8:DT5_P
0.13
-0.167
0.016
4.13
-1.572
0.081
1
5
T_DC9:DG4_P
0.403
-0.088
-0.313
11.487
-4.635
3.394
1
7
T_DC11:DG2_P
0.049
-0.09
0.169
-3.914
-3.142
-0.372
1
3
T_DG7:DC6_P
-0.097
-0.154
-0.359
-8.964
-4.238
0.653
1
6
T_DG10:DC3_P
-0.216
-0.213
-0.09
-0.186
-3.938
2.053
1
2
T_DT6:DA7_P
-0.125
-0.097
0.237
-7.505
-17.293
2.81
1
8
T_DT12:DA1_P
-0.089
-0.192
-0.073
17.529
0.085
3.081
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.