4Q0W: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: NA2969 PDB ID: 4Q0W

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	3	CC_DA3DT4:DA12DT13_DD	-0.011	-0.575	3.33	1.71	-2.609	35.318	-0.553	0.275	3.358	-4.29	-2.812	35.451
1	11	CC_DA11DC12:DG4DT5_DD	-0.465	0.11	3.214	-5.279	1.561	35.017	-0.048	-0.007	3.249	2.575	8.707	35.434
1	5	CC_DC5DC6:DG10DG11_DD	0.749	0.782	3.084	1.835	2.19	34.361	0.994	-0.992	3.161	3.699	-3.099	34.476
1	6	CC_DC6DG7:DC9DG10_DD	-0.44	0.495	3.207	-1.366	6.601	33.955	-0.184	0.53	3.258	11.167	2.31	34.598
1	9	CC_DC9DC10:DG6DG7_DD	-0.167	-0.343	3.369	-1.73	6.398	29.668	-1.966	-0.037	3.23	12.302	3.326	30.383
1	10	CC_DC10DA11:DT5DG6_DD	0.272	1.015	3.204	4.863	5.441	38.371	0.859	0.183	3.321	8.187	-7.318	39.033
1	12	CC_DC12DC13:DG3DG4_DD	0.005	-0.005	3.502	-1.333	2.297	37.67	-0.325	-0.191	3.494	3.551	2.061	37.76
1	13	CC_DC13DT14:DA2DG3_DD	1.114	1.194	3.132	9.603	-3.594	37.245	2.244	-0.518	3.187	-5.501	-14.697	38.582
1	2	CC_DG2DA3:DT13DC14_DD	0.066	-0.154	3.395	-1.805	1.101	39.343	-0.364	-0.32	3.384	1.634	2.678	39.398
1	7	CC_DG7DT8:DA8DC9_DD	0.12	-0.887	3.349	1.22	1.671	32.432	-1.883	0.004	3.303	2.988	-2.181	32.496
1	1	CC_DT1DG2:DC14DA15_DD	-0.768	1.017	2.929	0.436	9.688	31.487	0.238	1.426	3.087	17.344	-0.781	32.91
1	4	CC_DT4DC5:DG11DA12_DD	0.273	0.067	3.367	-0.577	5.379	39.362	-0.547	-0.471	3.343	7.941	0.852	39.717
1	8	CC_DT8DC9:DG7DA8_DD	-0.358	-0.447	3.357	-2.422	0.766	39.424	-0.754	0.237	3.363	1.134	3.586	39.502
1	14	CC_DT14DT15:DT1DA2_DD	0.621	1.103	2.871	-3.244	2.756	39.177	1.349	-1.259	2.88	4.095	4.82	39.398

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.