A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jan-2020 number of released structures: 10593
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NDB ID: NA2993  PDB ID: 4QC7 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
19A_5FC9:DG16_B0.335-0.1290.044-10.262-7.64-1.552
15A_DA5:DT20_B0.047-0.04-0.1455.61-15.0460.772
16A_DA6:DT19_B-0.17-0.1360.1182.004-16.4633.924
11A_DC1:DG24_B0.338-0.1440.0262.144-4.0190.81
13A_DC3:DG22_B0.237-0.152-0.0510.83-4.8310.118
111A_DC11:DG14_B0.085-0.2370.3251.657-14.458-1.651
12A_DG2:DC23_B-0.144-0.2040.4160.256-10.889-4.213
14A_DG4:5FC21_B-0.327-0.078-0.0410.648-9.4232.22
110A_DG10:DC15_B-0.348-0.1680.1333.816-2.0262.595
112A_DG12:DC13_B-0.21-0.26-0.0844.178-1.164-2.409
17A_DT7:DA18_B0.039-0.030.1030.152-17.8444.42
18A_DT8:DA17_B0.035-0.1420.008-3.608-15.4764.886

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.