A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 26-Jun-2019 number of released structures: 10246
Search for released structures

NDB ID: NA3174  PDB ID: 4RD5 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
13C_DA5:DT29_D120
14C_DA6:DT28_D120
110C_DA12:DT22_D120
111C_DA13:DT21_D120
11C_DC3:DG31_D119
16C_DC8:DG26_D119
19C_DC11:DG23_D119
113C_DC15:DG19_D119
114C_DC16:DG18_D119
15C_DG7:DC27_D119
17C_DG9:DC25_D119
18C_DG10:DC24_D119
12C_DT4:DA30_D00
112C_DT14:DA20_D120
117E_DA5:DT29_F120
118E_DA6:DT28_F120
124E_DA12:DT22_F120
125E_DA13:DT21_F120
115E_DC3:DG31_F119
120E_DC8:DG26_F119
123E_DC11:DG23_F119
127E_DC15:DG19_F119
128E_DC16:DG18_F10
119E_DG7:DC27_F119
121E_DG9:DC25_F119
122E_DG10:DC24_F119
116E_DT4:DA30_F120
126E_DT14:DA20_F120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)