4TMU: Base Pair Morphology Step Parameters

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As of 31-May-2023 number of released structures: 12820

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NDB ID: 4TMU PDB ID: 4TMU

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	3	BB_DA5DG6:DC19DT20_BB	-0.527	0.398	3.342	1.409	0.114	32.536	0.69	1.189	3.318	0.203	-2.514	32.565
1	5	BB_DA7DA8:DT17DT18_BB	0.406	-0.371	3.303	-2.236	4.486	26.648	-1.92	-1.429	3.155	9.623	4.796	27.107
1	6	BB_DA8DT9:DA16DT17_BB	0.434	-0.606	3.227	-4.339	-2.639	37.166	-0.602	-1.235	3.192	-4.117	6.769	37.499
1	1	BB_DG3DT4:DA21DC22_BB	-0.912	-0.794	4.72	15.586	-9.577	39.065	0.273	3.452	4.16	-13.462	-21.908	42.984
1	4	BB_DG6DA7:DT18DC19_BB	-0.664	-0.072	3.286	3.966	2.018	44.201	-0.281	1.244	3.212	2.674	-5.255	44.413
1	2	BB_DT4DA5:DT20DA21_BB	0.206	0.004	2.937	-7.007	17.526	29.663	-2.361	-1.289	2.459	30.64	12.25	35.046
1	7	BB_DT9DT10:DA15DA16_BB	0.989	-0.203	3.185	4.136	-2.077	34.138	-0.022	-1.03	3.285	-3.517	-7.005	34.441
1	8	BB_DT10DG11:DA14DA15_BB	0.967	3.039	3.596	2.582	13.142	71.214	2.061	-0.718	4.059	11.188	-2.198	72.299

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.