A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 4TQR  PDB ID: 4TQR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16P_DA6:DT13_T0.271-0.116-0.062-0.604-9.534-0.928
17P_DA7:DT12_T0.175-0.0610.056-2.536-11.921-1.244
110P_DA10:DT9_T-0.024-0.0980.024-2.753-9.7935.295
11P_DG1:DC18_T-0.19-0.154-0.012-0.086-4.848-1.378
12P_DG2:DC17_T-0.247-0.075-0.1411.108-5.524-0.001
13P_DG3:DC16_T-0.091-0.1660.0861.708-9.533-1.022
14P_DG4:DC15_T-0.133-0.2050.14-2.493-13.114-1.462
15P_DG5:DC14_T0.002-0.210.003-1.417-12.111-2.787
18P_DG8:DC11_T-0.204-0.164-0.1174.76-0.924-0.48
19P_DG9:DC10_T-0.329-0.162-0.1140.571-11.2081.831
111P_DT11:DA8_T-0.106-0.0440.1130.667-13.17-0.352
112P_DT12:DA7_T-0.194-0.105-0.1837.493-8.307-3.946

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.