A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 4U3M  PDB ID: 4U3M 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A40A41:U466G467_220.145-0.4413.728-3.99413.97560.194-1.164-0.3513.54313.7193.92161.764
14122_A41A438:G465U466_220.2930.133.521-2.8582.571.6250.02-0.3543.5112.1342.44171.712
15822_A67G69:U82G83_220.472-0.393.794-2.0927.88860.746-0.814-0.5783.7067.7622.05961.24
16022_A93A399:U395G396_22-2.049-0.1893.049-5.7772.695-5.266-3.686-24.9320.574-21.339-45.747-8.267
17822_A103C309:G357U358_221.214-1.9993.146-5.5613.69294.672-1.419-0.9183.0282.5083.77894.851
17722_A105A103:U358C308_223.691-4.523-2.1143.26298.39416.016-0.375-3.339-2.97877.048-33.876108.303
18522_A108G109:C305U306_22-0.203-0.8623.103-5.05210.31732.396-2.942-0.3822.7117.8078.7234.321
18922_A112U113:A301U302_22-1.25-1.7223.098-3.04113.55920.261-7.4882.1721.77733.8737.59824.527
19822_A124U125:U292U293_220.468-1.2033.552-0.3128.54741.104-2.615-0.6883.24512.0160.43941.946
110222_A162G163:G151U152_220.358-3.1750.996-177.62226.471-3.7721.456-0.7060.855-13.265-89.01-179.584
110422_A164G165:C149U150_220.412-1.5293.664.1696.6136.372-3.355-0.0423.36510.441-6.58537.174
110822_A168A169:A145U146_220.366-1.0743.4515.595-1.03737.705-1.4191.3493.366-1.528-22.96240.707
110922_A169A171:U144A145_222.132-2.3623.9450.55411.38967.114-2.613-1.8833.56810.225-0.49867.964
111022_A171C172:G143U144_221.621-1.9472.949-6.465.45322.463-6.037-5.5011.89713.40315.87923.982
111222_A173U174:A266G142_22-2.117-2.6373.4661.188-5.66881.428-1.8631.6523.586-4.34-0.9181.598
111322_A182C184:G201U203_220.496-2.4636.457-6.08913.42961.182-3.513-0.9975.79112.9925.89162.766
111822_A188C189:G196A197_221.208-0.9663.2641.009-8.07362.577-0.558-1.1093.37-7.737-0.96763.05
112222_A206U207:C258U259_220.493-1.6163.875-4.37716.1735.693-4.479-1.2962.83424.776.70539.313
112622_A210U211:A254U255_220.773-1.8723.4371.9223.21327.963-4.61-1.1273.256.612-3.95528.207
112922_A213G214:A251U252_22-0.678-1.0063.269-2.58317.2458.218-1.8090.552.9217.2992.59260.552
114622_A265U267:A288U289_22-1.823-0.8342.669-1.853-0.61844.247-1.0592.2762.75-0.822.45944.288
18322_A312A315:A352A353_225.242-0.6342.8614.297-25.9614.6087.258-9.921.957-79.164-13.10326.708
115222_A316C317:G347U348_220.096-2.1853.3194.3836.14330.518-5.1330.6062.82211.452-8.17131.416
115522_A323U324:A344U345_22-1.054-1.3063.314-4.80221.00438.627-3.6110.9792.43629.1596.66744.029
116022_A328G329:C339U340_220.512-1.7513.6518.29410.28531.775-4.6680.5062.99517.85-14.39534.347
116322_A366A367:U374U375_22-0.084-1.3633.003-0.3994.30634.05-2.9130.0872.8167.3170.67734.316
116422_A367U368:G373U374_22-0.225-1.3312.8980.9648.69541.06-2.6240.3992.57112.229-1.35741.942
16122_A399A401:C394U395_22-0.101-1.7863.102-5.367-1.25140.733-2.414-0.4153.141-1.7877.66841.089
16222_A401G404:C393C394_223.436-1.453.5390.9120.3975.888-1.192-2.7643.5680.317-0.74275.894
16622_A407C408:G389G390_22-1.2081.3122.8463.435.443-18.711-6.019-2.1312.544-16.13510.17-19.777
16922_A410C411:G422G423_220.894-1.1352.806-4.1193.73421.515-4.08-3.5712.3679.79210.80322.214
14222_A438U439:A464G465_22-3.447-3.4982.63813.2347.5412.318-10.73410.919-2.025.373-44.53619.566
14422_A441C442:G462U463_22-0.889-2.4913.44-2.9096.82433.464-5.2921.0572.95411.6744.97734.253
15622_A452G63:C87U88_22-2.998-1.7772.9451.5945.15155.698-2.153.2752.7045.499-1.70255.938
1122_A468G595:C31U32_221.534-3.0643.653-7.7227.06882.434-2.497-1.3593.3025.3445.83882.978
117422_A481A483:U504A505_22-1.409-3.5695.12416.36315.56542.343-6.063.4753.00219.944-20.96547.744
117522_A483A485:U502U504_220.54-3.2666.394-10.0720.13155.224-3.489-1.6916.210.1410.76556.064
117622_A485G486:U501U502_222.113-2.1155.00417.59114.15728.87-6.4740.4764.17724.257-30.14136.503
117322_A511A538:G540A477_22-3.09-4.354-3.487-25.37885.287173.394-2.111.567-3.61742.68912.703175.289
117922_A515G516:C536G537_221.006-0.5073.551-3.5195.54859.694-0.8-1.1923.4375.5563.52460.022
118122_A518A520:U532U533_22-1.673-1.2214.10612.05638.19749.043-3.1342.2292.28239.377-12.42862.527
118222_A520U522:C531U532_22-1.012-1.0675.2729.94810.39554.513-2.0541.9564.77611.132-10.65456.239
118822_A550G557:C587U588_22-1.596-1.0652.947-7.102-0.04738.449-1.5881.5793.182-0.07110.67339.075
119522_A567G568:C575G576_220.33-1.5182.8744.48813.99545.715-2.781-0.1152.35917.489-5.60847.899
1622_A599U600:A26U27_220.584-1.1612.864-1.2453.327.671-3.079-1.4642.6826.8652.58927.89
1822_A601U602:G23U24_22-0.228-1.1843.2591.3269.39137.885-2.8550.4942.88614.195-2.00539.011
11122_A604C4:G20U21_22-3.142-0.4975.0426.8420.35459.956-0.4814.4523.50.336-25.52765.178
120022_A615G616:C1105U1106_22-0.123-1.8863.4262.28211.1333.157-4.7410.5342.66118.829-3.86134.997
120222_A622G1032:U1103U1104_220.677-3.4422.8225.4662.195.31-29.957.7251.40717.846-44.5517.928
127022_A746C747:G802U805_223.63-1.3024.503-32.2640.50757.625-1.229-4.8782.3730.48730.96965.362
127522_A760G761:A789U790_22-0.65-0.6643.7733.368-0.59763.562-0.5990.7863.744-0.567-3.19563.644
127722_A774G775:U785C786_220.991-4.397-2.019132.756-112.827-51.2130.949-0.978-4.12157.47567.627-174.792
128022_A814G816:A855U857_224.590.580.145-117.18109.111150.6610.31-2.276-0.654.77258.823174.988
114422_A844G845:C827U828_22-0.826-1.4563.4040.0783.14931.391-3.2751.5353.2445.801-0.14431.545
122022_A865G866:C962U965_222.605-1.6133.1652.0983.2750.969-2.089-2.8793.163.794-2.43351.107
123422_A881U882:U946U947_220.569-1.0322.911-0.568-4.1341.333-1.059-0.8572.988-5.8330.80241.534
123722_A884G885:C927U928_22-0.384-0.8173.2494.9951.6239.861-1.3691.1163.1462.363-7.28840.191
124022_A887U888:A924G925_22-0.097-0.6843.489-4.2556.87934.64-2.174-0.4933.28611.3627.02835.544
124422_A891A892:U920U921_22-0.71-1.2143.265-0.8533.7733.605-2.6831.0853.1316.4951.46933.82
124522_A892U893:A919U920_220.555-1.3293.1430.46314.33829.425-4.536-0.9162.27626.345-0.85132.666
128522_A900G902:A907U909_22-1.082-0.836.67713.95221.68896.883-1.2451.166.30114.306-9.20399.42
128622_A933U935:G876A944_222.820.784-0.124-75.574150.48462.3130.563-1.33-0.54777.73839.041170.073
120722_A966A967:U632U633_22-1.295-1.9623.244-1.0252.71237.416-3.3961.8833.1324.2191.59537.524
120822_A967U968:G631U632_220.491-1.233.2923.9036.50232.915-3.152-0.2263.03811.29-6.77733.754
121122_A970A971:G628U629_225.409-1.6623.36-3.5081.34430.27-3.406-10.9282.6562.5626.68530.497
121222_A971G972:C627G628_220.872-0.7043.743-2.3278.74465.262-1.049-0.9093.6048.0672.14665.817
121422_A973A974:C625U626_22-0.021-1.3533.069-4.5353.72327.398-3.599-0.9352.837.7479.43728.007
121522_A974C975:G624C625_220.124-1.3753.2241.4873.36941.535-2.276-0.0223.1114.74-2.09241.691
129022_A979G980:C1021C1022_22-0.317-1.0613.822-4.85710.57453.105-1.9030.0073.5811.6685.3654.274
129422_A983G984:U1017U1018_22-0.016-2.0662.9532.24613.20219.792-8.0920.5661.32233.851-5.75923.859
129922_A992A993:G1011U1012_22-3.5750.4024.661-115.643-130.313-69.5950.898-2.7640.96166.083-58.643-175.26
130022_A993G994:C1010G1011_220.247-0.5423.268-4.4449.84753.003-1.195-0.5413.10110.9064.92154.015
130222_A995U996:G1008U1009_220.658-1.8873.256-3.825-1.14933.539-3.064-1.7493.224-1.9826.633.769
130422_A1036C1037:G1094U1095_220.573-1.9263.232.2470.63733.323-3.455-0.6293.2241.11-3.91333.402
130622_A1061U1063:U1056U1058_226.095-3.3990.54771.188133.949-56.0411.4913.2540.387-73.50739.066-155.066
130922_A1065C1066:G1053U1054_220.875-2.1393.39-2.5537.12637.983-4.076-1.6242.89510.8173.87538.703
131322_A1069C1070:G1048U1049_220.234-1.5723.1314.1315.79727.672-4.3930.3862.75611.872-8.4628.556
132022_A1076C1077:G1041G1042_221.213-1.3212.8322.261-2.46326.027-2.313-2.1223.034-5.44-4.99326.237
133022_A1113U1115:A1131A1132_221.3613.3441.03-129.714122.574-41.631-1.7130.637-0.856-61.627-65.217-178.566
133222_A1116U1117:U313G1130_22-3.577-1.9382.518-2.3478.49236.343-3.8525.3552.24313.3753.69637.361
11622_A1138U8:U15G16_22-1.0110.4922.754-1.123-1.17712.8673.293.4142.775-5.2244.98512.969
12022_A1142A1143:A11U12_22-0.076-1.9893.8945.0516.29239.419-3.710.7673.5139.211-7.39540.204
12122_A1143U1144:G10A11_22-0.957-2.0723.2451.1611.26825.348-5.0662.5013.0932.884-2.64225.406
12522_A1147C1148:G1629U1630_220.282-1.3573.1673.61112.44729.405-4.4570.072.42623.155-6.71832.077
12822_A1151A1152:U1626U1627_22-0.709-1.5273.388-4.2722.28540.213-2.470.533.3553.3096.18640.492
12922_A1152G1153:C1625U1626_22-0.235-1.5873.0180.5893.91227.173-4.1990.6242.768.27-1.24527.455
13422_A1157A1160:U1617U1621_225.277-0.2633.666-5.555-14.311113.9530.016-3.2023.509-8.5133.305114.619
13522_A1160C1161:G1616U1617_220.136-1.0833.6692.2471.56232.097-2.2630.2023.6152.818-4.05532.21
135922_A1203A1556:U1598A1597_22-0.6443.9242.587-157.75954.144-163.598-2.019-0.4872.294-27.094-78.943-178.12
136222_A1211G1212:C1451U1452_220.91-1.9734.02811.25818.28423.997-7.1980.5892.23736.076-22.21332.096
136722_A1219C1220:G1263G1264_220.531-0.4763.71-2.1020.14568.107-0.431-0.5643.6930.1291.87768.135
136922_A1221C1222:G1261U1262_220.08-0.9773.407-5.5037.99131.941-3.039-1.063.02714.1199.72333.346
137122_A1223A1224:U1259U1260_220.192-1.8683.55217.20918.72530.77-4.8581.6561.99629.734-27.32639.722
137522_A1234G1245:U1250U1251_221.998-2.416-0.303-96.921-140.315167.601-1.219-0.991-0.21-70.1848.476178.979
137722_A1236G1237:C1248U1249_220.82-1.3423.7710.51311.04233.555-4.004-1.2693.19618.512-0.8635.279
138522_A1275U1276:A1436C1431_220.517-3.8393.5092.78318.816-20.3381.0692.1025.103-43.0296.364-27.777
140122_A1296G1297:A1300U1301_22-4.108-1.9593.2110.70610.87253.493-2.7454.5252.74411.939-0.77654.511
141322_A1344A1345:U1380U1381_22-0.758-0.8483.002-1.650.40232.004-1.6021.0983.0260.7282.99132.047
141422_A1345A1348:U1377U1380_221.7281.4714.50516.9487.308100.2460.792-0.754.7534.733-10.977101.48
141522_A1348G1349:C1376U1377_22-0.205-1.5343.055-5.72113.3727.674-4.988-0.5322.1125.81611.04731.196
142322_A1357G1358:C1365U1366_22-0.177-1.7842.9991.92813.22529.374-5.1120.5952.01424.543-3.57832.21
142622_A1391U1392:A1406U1407_22-0.783-1.7233.448-0.6910.69932.946-4.511.2122.78518.2721.17834.601
135622_A1469C1470:G1574G1170_22-0.5520.2953.007-2.6723.65528.011-0.1840.5523.0587.4895.47628.367
143322_A1475C1476:G1531U1532_220.284-1.293.2124.4272.53541.949-2.0440.0483.1463.525-6.15742.244
143722_A1479G1480:C1527U1528_22-1.393-2.5673.8759.478.51725.13-7.2615.0662.24318.161-20.19328.127
144022_A1487G1488:C1518U1519_220.661-1.6062.635-11.796-3.79627.001-2.497-3.2782.347-7.6423.74129.661
144922_A1543U1544:U1567C1568_22-0.508-0.3952.863-7.45119.15947.124-1.6120.1392.58122.7428.84551.177
145122_A1545G1546:C1565U1566_22-1.655-1.7393.123.2278.16134.424-3.8953.1272.49613.52-5.34535.492
145322_A1547G1548:C1563U1564_22-0.08-1.7373.2412.1412.43929.644-3.8690.5883.0784.748-4.16829.817
145622_A1550U1551:U1560U1561_220.519-2.8313.199-2.9353.98486.273-2.153-0.4423.0772.9112.14586.387
133822_A1576A1577:U1168G1169_221.274-1.2624.091-0.84112.84256.94-2.117-1.3633.73513.2830.8758.258
133922_A1577U1578:G1167U1168_220.213-1.2692.972.157-5.59244.044-1.195-0.0963.107-7.416-2.86144.43
145722_A1586A1587:U1609G1610_22-0.215-0.4932.841-6.1670.0857.334-0.515-0.0672.8470.0836.40757.636
145822_A1587G1588:U1608U1609_22-0.239-1.8963.8122.11617.90336.812-4.7670.5852.63526.49-3.13240.851
146322_A1592A1593:U1603U1604_220.433-1.0643.704-1.2247.29544.022-2.142-0.6943.4819.651.61944.609
146422_A1593G1594:C1602U1603_22-0.913-1.7192.9220.9552.06129.676-3.7231.9532.7694.016-1.86129.76
146722_A1719G1720:A1681U1682_220.753-0.8563.0375.41419.017108.895-0.736-0.3982.93911.629-3.311110.106
146922_A1721A1722:G1679G1680_22-0.483-0.4772.9930.397.82730.444-2.1970.9572.78114.603-0.72831.413
147022_A1722U1723:A1678G1679_221.945-1.0873.387-1.4116.70457.759-1.477-2.0773.216.9141.45558.129
147622_A1728C1729:G1672G1673_220.93-0.9713.146-6.47.67932.565-2.766-2.5132.63113.30911.09134.025
147822_A1730A1731:G1670A1671_220.834-2.0923.1029.422-2.681-24.4275.2284.0382.3816.03621.21-26.29
147922_A1731A1732:U1669G1670_220.475-0.7863.451-6.8689.31958.335-1.28-0.8383.2349.4586.97159.373
148022_A1732C1733:G1668U1669_22-0.614-1.3553.3281.714.47439.597-2.51.0963.1356.575-2.51339.874
148822_A1740U1741:A1660U1661_220.502-1.4733.1332.454.23327.682-3.959-0.4992.9128.76-5.07128.102
149222_A1744G1745:A1655U1656_22-1.665-0.7073.430.57316.41459.156-1.4941.6633.1416.287-0.56861.194
149422_A1746G1747:C1653G1654_221.691-0.2684.082-5.88618.84864.303-1.15-1.8163.73817.2875.39966.954
149722_A1749A1750:U1650A1651_22-0.701-2.0353.2642.9893.75219.193-7.5753.3562.68111.032-8.78819.778
149822_A1750C1751:G1649U1650_220.954-1.3513.0761.0323.51530.657-3.167-1.6072.9366.618-1.94430.869
150122_A1753A1754:C1646U1647_22-0.905-3.342-1.018-148.78289.947102.225-1.4520.817-1.39245.32574.973176.145
150222_A1754A1756:G1645C1646_22-3.206-2.1962.10290.124-107.339169.444-1.0291.6622.062-53.729-45.112176.408
150322_A1756G1757:C1644G1645_22-0.14-2.3253.294-6.4522.15338.778-4.731-0.3081.7830.3268.82944.895
150822_A1762A1763:C1639C1640_22-1.647-1.1213.499-5.263-2.85545.971-1.1571.5993.715-3.6376.70546.338
150922_A1763C1764:G1638C1639_22-0.715-1.3953.2823.6041.90240.554-2.211.4193.1442.736-5.18340.75
151822_A1776G1777:C1784U1785_22-0.12-0.9563.1831.2767.94434.985-2.6250.3672.89813.002-2.08835.87
11222_C4U5:A19G20_22-0.37-1.7283.1790.956-1.41327.484-3.291.0073.248-2.971-2.00927.536
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1317755_U3041U3042:A3012U3013_55-0.382-1.4193.548-0.7083.92945.588-2.190.4253.4265.0590.91245.753
1317855_U3042C3043:G3098A3012_551.375-2.1093.119-1.9693.28440.643-3.356-2.1712.884.7152.82840.815
1318355_U3047U3051:A3091A3094_55-5.784-0.3733.76311.070.028106.695-0.2323.7543.3390.018-6.888107.092
1318455_U3051G3052:U3090A3091_551.449-1.1953.025-3.7469.28926.419-4.259-3.72.2619.4577.84728.222
1318755_U3054U3055:A3086G3088_55-0.763-1.9255.803-2.23619.05169.953-2.7250.5195.22316.3121.91472.211
1322255_U3064G3065:C3076A3077_550.017-1.4813.157-2.00525.3730.12-4.678-0.221.50740.8663.22939.241
1322455_U3066C3067:G3074G3075_550.393-1.7742.986.3864.34425.822-4.790.5992.6699.454-13.89926.933
1320355_U3100G3101:C3133A3134_55-0.982-1.9983.3171.061-10.73728.943-1.4182.0773.765-20.6-2.03630.848
1320755_U3104A3106:G3128A3129_553.292-1.4876.11513.53127.62224.308-8.664-1.7743.94347.208-23.12539.021
1320955_U3107G3108:C3126A3127_550.091-1.6742.607-1.9025.3531.547-3.761-0.4232.299.7413.46332.041
1321355_U3121G3112:A3122A3123_550.4483.9133.967-171.6121.526-50.705-1.978-1.6892.076-0.785-88.199-172.427
1322855_U3160C3161:G3289G3290_550.343-1.3663.2137.1363.66225.87-3.8181.022.9817.94-15.47227.065
1323655_U3169A3170:U3280U3281_55-0.012-1.444.29520.374.13926.737-3.3514.3013.2417.651-37.65433.75
1324555_U3192C3193:G3199G3200_550.232-2.0472.8673.1639.01528.744-5.360.0612.15417.558-6.1630.258
1324955_U3222A3223:U3262G3263_55-0.587-2.8734.06-2.85212.38716.418-13.180.4351.59736.9918.51820.737
1325455_U3231G3232:U3255G3256_550.648-2.1222.864-1.59417.95217.307-8.134-1.7860.43846.3244.11324.937
1325955_U3236U3237:U3250U3251_550.134-2.3753.645-0.3911.15622.875-8.451-0.412.25526.2190.91625.42
1326055_U3237G3238:C3249U3250_55-0.379-1.5953.2364.7067.28134.755-3.5751.252.78311.96-7.7335.787
1326655_U3297C3298:G3390A3391_550.16-2.353.859-1.0888.2635.193-5.071-0.4273.23713.431.76936.135
1326955_U3300U3301:U3313A3314_550.86-1.3683.8240.11914.95945.176-3.041-1.0583.24318.87-0.1547.465
1327055_U3301U3302:U3312U3313_55-0.615-2.8132.906-3.515.01215.677-10.6860.8450.26843.6110.16721.952
1327155_U3302G3303:C3311U3312_55-0.562-0.6542.937.64810.31535.307-2.1711.732.47916.354-12.12537.499
1328355_U3329A3330:U3373U3374_550.181-1.1343.081-0.8329.25241.824-2.392-0.3242.77712.7711.14842.798
1328555_U3331U3332:G3371A3372_550.129-1.1252.872-0.8192.38536.336-2.087-0.3042.7923.8191.31136.421
1328655_U3332G3333:A3370G3371_550.6920.22.6824.617.34155.515-0.136-0.5162.7317.828-4.91656.135
1329655_U3346A3347:U3358A3359_550.538-1.7153.2293.3467.70926.33-5.329-0.3742.67516.4-7.11827.616
153844_A37G39:A104C106_44-0.4942.3352.313-6.82517.536138.7261.1720.2352.4539.3573.642139.306
154044_A40A41:G103A105_44-0.419-0.3592.957-0.646-3.721116.934-0.1760.242.965-2.1830.379116.972
154144_A41G42:U102G103_440.944-0.6273.653-9.58910.54955.854-1.269-1.5433.30611.06210.05657.502
154344_A43A44:U100U101_44-0.295-1.6623.4925.19-2.43737.484-2.2221.173.518-3.765-8.01837.905
154444_A44C45:G58U100_440.874-1.2333.01-0.5592.71941.555-1.994-1.2832.9163.8280.78741.644
1164944_A65A66:U93C94_440.177-1.2653.35-5.5331.08349.762-1.574-0.6163.2871.2826.55150.06
1165044_A66U67:A92U93_44-0.399-1.4363.5652.1393.341.754-2.3740.7953.4244.618-2.99341.931
154544_C45G46:C57G58_441.124-1.7743.2642.6418.12627.951-5.178-1.6892.74316.347-5.31329.203
154744_C47C62:U55G56_44-1.233-2.6783.1059.8727.17949.114-3.5762.0482.4418.485-11.66950.516
1165644_C115G116:C137G107_44-1.638-3.9052.798-1.573-3.2197.059-17.0846.3934.407-24.19611.8277.915
1165844_C117C118:G135G136_44-1.222-2.2493.411-1.9837.21325.63-6.6892.1482.77115.8344.35226.682
1165944_C118C119:G134G135_44-0.516-2.0793.463-5.9367.63632.626-4.781-0.0692.96113.23510.28833.992
1166044_C119C120:G133G134_44-0.075-1.9982.9227.4555.96529.985-4.6191.3032.40311.178-13.9731.435
1166144_C120U121:G132G133_440.243-1.6093.4012.7029.50136.516-3.69-0.0332.91714.832-4.21837.785
153944_G39A40:A105A104_44-2.316-2.8134.0644.794-10.585-125.8131.684-1.2513.9755.9392.69-126.114
154244_G42A43:U101U102_44-0.706-2.4182.968-8.1915.85530.878-5.2240.0112.57710.64814.89632.441
154644_G46C47:G56C57_44-0.655-1.4333.332-5.4572.47238.613-2.4480.313.2963.7118.19239.057
1164644_G49C50:G75C76_440.258-1.4953.022.0254.30826.599-4.176-0.0932.769.27-4.35827.014
1164744_G63U64:A96A97_44-0.619-2.9423.69-15.23611.07335.524-5.619-0.9192.72816.77423.08140.065
1165244_G68U69:A89C91_440.955-1.4763.3361.7451.98532.641-2.966-1.3893.2883.525-3.09832.745
1165444_G70A71:G87A88_440.321-2.0574.7653.1420.051-4.38321.39232.3253.706-0.58135.641-5.393
1165544_G114C115:G107C108_44-0.48-2.3573.265-4.2551.16131.789-4.4710.1083.2152.1077.72232.086
1165744_G116C117:G136C137_440.548-1.3933.1311.1943.25740.446-2.349-0.6653.0294.7-1.72340.588
1166444_G123G124:C129C130_440.642-1.8833.189-0.4220.04231.222-3.506-1.2713.1780.0780.78431.225
1164844_U64A65:C94A96_443.606-2.3312.758-13.325-2.73428.637-3.953-8.1871.212-5.17525.2231.643
1165144_U67G68:C91A92_44-0.481-1.5233.48-0.2244.89932.517-3.5550.8113.2268.6860.39732.874
1165344_U69G70:A88A89_440.7451.2882.6251.78.08963.9810.923-0.6392.777.6-1.59764.456
1166244_U121U122:A131G132_44-0.025-2.233.1942.51714.51222.627-7.6930.5571.50232.887-5.70326.946
1166344_U122G123:C130A131_44-0.64-1.863.331-0.31511.59931.268-5.0281.0692.50720.650.56133.301
1333677_A27C28:G52U53_770.376-1.5482.9429.691-1.62428.612-2.6631.1122.989-3.171-18.91830.219
1331377_A63G65:C15U16_770.108-1.7043.381-2.83210.18426.897-5.552-0.812.55520.8985.81228.864
1331577_A66G67:U111U14_773.796-0.7613.2610.916-2.62458.813-0.638-3.8143.343-2.67-0.93358.873
1332177_A72C74:C105U106_770.434-1.1413.9021.0363.77460.845-1.339-0.373.8393.723-1.02260.958
1332477_A76U78:A102A103_772.1592.4911.317-127.042121.880.1330.877-1.4650.97561.39364.035176.936
1332677_A79G80:C100G101_77-0.413-1.2833.529-4.6533.17364.562-1.3410.1753.4882.9644.34764.78
1333177_A84G85:A95U96_77-1.082-0.8952.7792.6612.06724.409-2.6183.2042.5654.859-6.25524.637
1330577_C6G7:U114G115_772.23-2.6953.5555.92313.04912.626-14.023-4.0561.21244.46-20.17919.077
1333577_C26A27:U53U54_772.59-2.0142.363-14.578-0.61125.806-3.876-6.6990.853-1.2529.829.584
1333777_C28C29:G49G52_775.837-0.6183.06212.101-10.28369.858-0.149-4.5523.944-8.865-10.43271.416
1333877_C29G30:C47G49_77-0.066-2.4645.558-20.85728.21941.437-5.426-1.9243.13633.60424.83753.794
1334277_C36G37:U43G41_77-3.639-1.3023.8217.2670.336-4.1943.8079.2814.464-1.48776.44-17.768
1330877_C58U59:A20G21_770.259-1.6043.537-7.4810.57634.938-3.934-1.412.83716.91311.96237.191
1331777_C68C69:G109G110_77-0.405-2.4093.373-5.8779.57629.055-6.197-0.2912.50518.24911.231.108
1331877_C69U70:A108G109_770.299-1.9923.2520.4623.9424.428-5.782-0.5642.9049.234-1.08224.743
1332277_C74G75:A104C105_77-2.7-0.4913.40110.5023.93251.814-0.7943.6782.8024.441-11.8652.932
1330077_G1G2:U119C120_770.354-2.2822.822-1.0083.63319.046-8.198-1.4462.32810.8423.00919.412
1330177_G2U3:A118U119_770.355-1.5143.3550.0828.95642.007-2.941-0.4782.98612.325-0.11442.909
1330477_G5C6:G115C116_770.657-1.8783.326-1.7568.42929.826-5.028-1.5442.66615.9623.32531.017
1330677_G7G8:C113U114_77-0.941-1.4663.058-7.4464.10344.332-2.2580.63.0295.3789.76145.099
1330777_G8C9:G112C113_770.576-0.8882.8052.2914.63128.917-2.592-0.7212.679.182-4.54229.365
1333977_G30U31:A46C47_770.572-1.9113.4257.8138.31731.916-4.6220.2752.90714.557-13.67433.844
1334377_G37U38:A42U43_77-1.341-1.9933.4599.7462.63528.925-4.2814.4052.6885.084-18.80430.601
1331077_G60G61:C18C19_77-0.035-1.9093.464-3.1555.54434.505-4.012-0.4223.129.2495.26335.072
1331177_G61U62:A17C18_77-0.115-1.3462.9690.8911.76631.952-2.7260.3522.8883.205-1.61632.012
1331477_G65A66:U14C15_77-1.035-2.1873.574-1.3488.89938.083-4.3651.383.0413.412.03139.093
1331677_G67C68:G110U111_770.481-1.2082.904-3.2047.06841.817-2.278-0.9412.6329.8014.44342.5
1332077_G71A72:U106C107_77-0.567-1.112.90.4021.93233.92-2.1691.0262.8273.308-0.68933.976
1332377_G75A76:A103A104_77-0.901-2.901-1.444-149.84387.86419.115-0.9461.315-0.92145.2677.186173.791
1332777_G80U81:G99C100_770.539-1.9093.139-0.765-0.46833.749-3.215-1.0473.151-0.8061.31733.76
1332977_G82U83:A97C98_770.633-1.5323.3721.27910.16234.673-3.867-0.8452.84616.608-2.0936.11
1333277_G85G87:C94A95_771.235-2.4263.596-2.691-0.68729.168-4.635-3.0773.525-1.3595.32829.297
1333377_G87G88:C93C94_77-0.251-1.9253.282-2.306-1.20336.225-2.9180.0753.351-1.9313.70336.315
1333477_G88G89:A92C93_77-2.65-1.5262.719-3.818-0.60752.452-1.6882.7772.908-0.6854.31352.584
1330277_U3U4:A117A118_77-0.552-1.6763.349-3.9827.46930.592-4.4080.2962.91513.8267.37231.714
1330377_U4G5:C116A117_77-0.572-1.5763.021-0.11810.05432.908-4.0120.9522.4517.2530.20334.369
1334077_U31U32:A45A46_77-0.54-1.4813.269-4.44212.17228.664-4.8490.2262.50323.1498.44731.401
1334177_U32C36:G41A45_77-2.1062.853.307-0.828-8.103132.6321.611.1443.224-4.4230.452132.759
1330977_U59G60:C19A20_77-0.32-1.4452.8431.2223.62630.696-3.30.7992.6456.817-2.29830.928
1331277_U62A63:U16A17_77-0.535-1.1673.1560.74924.38729.983-4.350.8921.74539.869-1.22538.478
1331977_U70G71:C107A108_770.059-1.5113.0910.7255.08136.06-3.064-0.0022.8598.156-1.16436.412
1332577_U78A79:G101A102_775.127-1.5473.516-3.5173.464-11.3711.3617.8555.108-16.501-16.753-12.394
1332877_U81G82:C98G99_77-2.019-2.6963.366-5.84614.2118.112-10.5223.2851.4737.54515.44523.71
1333077_U83A84:U96A97_770.276-2.0523.8137.13919.63136.165-5.0340.3912.44328.857-10.49441.589
1223888_A33C32:G331G330_550.611.943-3.362-5.316-17.559-27.582-5.9471.839-1.7132.65-9.885-33.027
1334488_A40A41:G103A105_880.007-0.1353.124-2.032-6.446123.916-0.024-0.0213.126-3.6511.151124.023
1334588_A41G42:U102G103_880.799-0.7263.648-6.0988.19556.185-1.253-1.2033.4248.6236.41657.032
1334788_A43A44:U100U101_88-0.371-1.7763.6886.7121.65638.938-2.8421.4233.5032.46-9.97339.523
1334888_A44C45:G58U100_880.315-1.2593.012-5.612.43536.389-2.287-1.1822.8473.8658.90636.882
1335588_A65A66:U93C94_88-0.612-0.8223.441.4693.31647.853-1.2830.8733.364.082-1.80847.982
1335688_A66U67:A92U93_88-0.394-1.3733.619-5.5414.5239.331-2.578-0.1193.4686.6498.15139.95
1224388_C28U27:A336G335_550.92.434-3.4142.539-6.452-26.348-6.7371.295-2.82213.8515.452-27.23
1224188_C30U29:A334G333_550.9682.27-3.3691.808-6.252-23.595-7.2081.749-2.7514.9284.316-24.463
1223988_C32G31:C332G331_55-0.0741.569-3.184-0.962-6.45-38.9-3.039-0.004-2.8989.603-1.433-39.422
1334988_C45G46:C57G58_881.258-1.793.067-0.4782.44631.535-3.697-2.3882.9054.4910.87731.63
1335188_C47C62:U55G56_88-0.654-2.5343.44312.74414.32147.419-3.8751.5872.39517.018-15.14450.939
1336288_C115G116:C137G107_88-1.741-3.2923.5410.7691.3687.159-30.33316.192.66310.783-6.067.329
1336488_C117C118:G135G136_88-1.372-2.5773.043-5.0569.62724.332-7.6841.8852.12421.51911.30226.618
1336588_C118C119:G134G135_88-0.57-2.0892.912-0.2853.69229.003-4.8221.0762.6377.3350.56729.233
1336688_C119C120:G133G134_88-0.053-2.0193.6381.5548.730.155-5.410.3982.94916.287-2.90931.395
1336788_C120U121:G132G133_880.233-1.8183.338-3.89810.06441.127-3.486-0.72.80514.0365.43642.46
1224088_G31C30:G333C332_55-0.261.926-3.3691.303-11.373-29.983-5.385-0.688-2.47921.0432.411-32.047
1334688_G42A43:U101U102_88-0.58-2.4743.037-11.0966.32532.536-4.98-0.5322.58110.78618.9234.891
1335088_G46C47:G56C57_88-0.593-1.6493.2371.993-0.32935.799-2.6321.2463.215-0.534-3.2435.854
1335288_G49C50:G75C76_880.393-1.1872.8933.2773.32432.222-2.624-0.2022.7855.951-5.86632.549
1335388_G63U64:A96A97_88-0.538-2.9383.739-15.0824.57534.569-5.185-1.3513.2857.25123.90437.892
1335888_G68U69:A89C91_880.856-1.4113.1112.1123.7929.81-3.438-1.2452.9657.318-4.07830.117
1336088_G70A71:G87A88_880.24-1.8214.5371.339-4.596-3.4544.98210.2821.18152.07615.171-5.9
1336188_G114C115:G107C108_88-0.37-2.443.152.2992.33436.492-4.1810.8842.9663.718-3.66236.634
1336388_G116C117:G136C137_880.383-1.4573.087-5.6324.68438.852-2.657-1.172.8196.9668.37639.511
1337088_G123G124:C129C130_880.109-1.8333.13.8728.58835.247-3.9860.3022.59413.879-6.25736.446
1224585_U26C339:G25G337_850.1223.3710.526-155.39272.339-68.443-1.660.124-0.788-36.962-79.398-172.895
1224488_U27U26:G337A336_55-0.3841.546-2.441-1.216-2.404-29.537-3.391-0.564-2.3244.704-2.378-29.657
1224288_U29C28:G335A334_55-0.7331.638-3.055-0.579-1.372-34.805-2.928-1.143-3.0022.292-0.967-34.836
1335488_U64A65:C94A96_884.091-2.0862.691-14.881.08333.915-3.372-7.5790.8181.75424.11336.963
1335788_U67G68:C91A92_88-0.359-1.2873.4051.5253.00841.317-2.1470.6743.2934.254-2.15741.448
1335988_U69G70:A88A89_880.3261.2742.7850.89812.54356.7820.718-0.2932.98613.013-0.93258.045
1336888_U121U122:A131G132_880.074-2.3583.0585.239.56221.157-8.2061.1781.80424.09-13.17623.771
1336988_U122G123:C130A131_88-0.116-1.7823.232-1.9774.82227.876-4.689-0.1932.899.8994.05928.349

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.