A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
Search for released structures

NDB ID: 4U4Q  PDB ID: 4U4Q 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A39A40:G467C469_221.621-2.2933.545-9.019-14.278-5.65914.5910.7010.11460.541-38.242-17.804
14122_A40A41:U466G467_220.432-0.3183.6850.30811.34260.606-0.907-0.4063.58211.133-0.30261.559
15322_A67G69:U82G83_220.546-0.2523.735-5.758.20765.718-0.601-0.7593.6327.5175.26766.392
15522_A93A399:U395G396_22-1.906-0.162.813-5.0681.866-2.339-3.61-32.613-0.472-23.015-62.5-5.885
17322_A103C309:G357U358_221.092-2.173.403-3.457.6395.058-1.605-0.83.2345.1642.33595.337
17222_A105A103:U358C308_223.401-4.464-2.60142.09285.97520.006-0.304-3.572-3.04772.811-35.64797.292
18022_A108G109:C305U306_22-0.149-0.6693.163-2.28910.86231.348-2.876-0.0992.78719.3584.0833.209
18422_A112U113:A301U302_22-1.224-1.7082.9790.39612.97620.747-7.1172.9871.61832.273-0.98524.436
18722_A119U120:U297C298_222.637-1.3693.44-8.8752.37548.208-1.824-3.8312.8752.87710.75249.024
19222_A124U125:U292U293_220.559-1.1163.429-3.9027.06944.62-2.088-1.0793.1689.2215.0945.308
19422_A138G142:A173A266_225.782-1.5843.638-8.2013.8179.892-1.331-4.7043.0682.9586.36880.317
19822_A147A148:C166U167_221.048-1.9723.7571.8828.67947.512-3.158-1.123.40510.663-2.31248.287
19922_A148C149:G165C166_223.673-2.9783.651-5.86121.28543.665-5.013-4.8421.63526.6877.34848.685
110522_A182U183:A202U203_22-0.019-1.1072.8150.8528.62923.348-4.6470.252.26420.441-2.01824.885
111022_A188C189:G196A197_220.395-1.0733.574-1.516-10.99755.217-0.437-0.5163.698-11.7321.61856.236
111522_A206U207:C258U259_220.479-1.5313.542-5.45817.78834.651-4.348-1.3492.40727.5478.45239.195
111922_A210U211:A254U255_220.381-1.9023.6437.12710.81925.129-6.4630.9062.62723.016-15.16228.224
112222_A213G214:A251U252_22-0.735-0.7963.286-1.30618.37859.025-1.6220.6582.9618.1781.29261.585
127122_A218U843:A829U830_22-0.487-1.258-4.317157.32321.876-142.3480.722-0.908-3.884-11.01479.211-173.206
112422_A220A221:U840U841_220.701-2.8473.5238.576-8.40723.774-3.4071.3134.264-18.937-19.31726.596
112522_A221A222:U839U840_22-0.486-1.9243.1853.29616.14727.878-5.7951.351.76730.387-6.20232.301
112622_A222U223:G838U839_22-0.043-1.1783.016-3.46810.01238.694-2.727-0.2872.63714.7755.11840.065
112922_A225A226:U835U836_22-0.558-1.2563.5862.06820.72628.903-5.0351.2122.18636.192-3.61135.496
113022_A226U227:G834U835_221.065-1.6332.6574.942.29841.163-2.504-1.0732.6713.252-6.98941.507
113322_A265U267:A288U289_22-1.831-0.5832.8-1.1131.74746.271-0.8682.2462.8182.2221.41546.315
17822_A312A315:A352A353_225.07-0.5062.8694.322-27.2085.836.736-9.1891.866-77.311-12.2828.148
114122_A316C317:G347U348_220.187-1.9663.2197.7618.97730.722-4.8710.8782.53216.205-14.0132.883
114422_A323U324:A344U345_22-1.08-1.2423.332-4.88219.38937.726-3.5941.0152.54527.7346.98442.526
114922_A328G329:C339U340_220.298-1.8943.3155.4966.21629.414-4.7860.4862.87111.945-10.56230.537
115222_A366A367:U374U375_22-0.037-1.6392.932-2.8692.72236.637-2.918-0.2842.8024.3154.54736.843
115322_A367U368:G373U374_22-0.344-1.5363.0431.6973.76534.421-3.10.8132.8446.333-2.85534.66
15622_A399A401:C394U395_22-0.086-1.593.144-4.7170.53238.667-2.447-0.423.1110.7997.09138.946
15722_A401G404:C393C394_223.468-1.4013.5591.0240.58575.212-1.167-2.8083.590.48-0.83975.22
16122_A407C408:G389G390_22-1.31.2252.8912.2399.401-13.48-9.355-3.2931.837-34.7938.287-16.573
16422_A410C411:G422G423_220.808-0.8232.925-7.0315.21325.184-2.93-3.2962.411.52215.53826.639
115822_A441C442:G462U463_22-0.875-2.3052.9082.9861.49635.395-3.9641.812.7312.453-4.89835.547
15122_A452G63:C87U88_22-2.974-1.7523.0640.8211.78553.62-2.0443.3422.9661.978-0.9153.653
1122_A468G595:C31U32_221.749-2.8983.557-8.4988.42678.133-2.517-1.6143.1096.6496.70678.899
116322_A477A478:G510A511_22-0.768-2.5273.4040.1023.84825.84-6.6231.7272.9998.545-0.22626.12
116422_A478C479:G509G510_220.468-1.1412.647-1.047-3.68927.697-1.634-1.1742.754-7.662.17327.956
116722_A481A483:U504A505_22-1.063-3.9884.87713.38415.04942.975-6.5252.7042.9619.327-17.18847.257
116822_A485G486:U501U502_221.824-2.2124.30810.02410.36522.127-8.437-0.5313.45224.003-23.21526.361
117122_A515G516:C536G537_221.638-0.2993.506-2.5488.06258.977-0.73-1.7853.3768.1432.57359.526
117422_A518A520:U532U533_22-2.131-1.1753.4859.61929.7844.28-3.0152.911.92534.848-11.25653.764
118022_A550G557:C587U588_22-1.544-0.772.723-6.3984.92540.432-1.5491.6042.8167.0429.14741.197
1622_A599U600:A26U27_220.979-1.13.284-5.5179.49828.449-3.851-2.8842.56318.47810.73330.455
1822_A601U602:G23U24_22-0.108-0.9013.1998.52610.13635.912-2.581.1772.7615.792-13.28438.201
11122_A604C4:G20U21_22-2.815-0.835.36825.868-5.01152.38-0.4594.9273.775-5.314-27.4358.212
119022_A615G616:C1105U1106_22-0.406-1.9793.5872.3047.69932.584-4.7271.0923.01913.468-4.0333.534
119222_A622G1032:U1103U1104_220.803-3.1463.3411.53811.57.793-14.6962.124-0.04245.605-45.75618.047
126022_A746C747:G802U805_223.987-1.3734.328-30.961-2.72960.439-1.124-4.9082.322-2.53928.80967.285
126422_A760G761:A789U790_22-0.231-0.7723.6663.636-0.43462.449-0.7210.4063.654-0.418-3.50462.545
126622_A774G775:U785C786_220.608-4.6241.938130.607-112.43459.947-1.20.9923.98-57.467-66.755173.362
126922_A814G816:A855U857_224.5771.042-0.252-123.175105.783158.2330.553-2.253-0.76952.99461.706176.683
127322_A844G845:C827U828_22-0.932-1.6933.4240.9542.84727.038-4.3252.2253.1986.066-2.03327.201
121022_A865G866:C962U965_222.975-1.6143.2383.4432.81445.724-2.313-3.5123.3423.611-4.41845.928
121422_A869C870:G957U958_220.238-0.9543.118-1.41310.7247.541-1.915-0.3892.84513.11.72748.686
122522_A881U882:U946U947_220.936-1.0292.911-3.609-3.16341.683-1.144-1.6412.891-4.4275.05141.946
122822_A884G885:C927U928_22-0.674-1.0553.3273.489-1.71434.161-1.5131.6943.292-2.906-5.91534.375
123122_A887U888:A924G925_22-0.257-0.9563.405-6.5817.49331.88-2.931-0.6643.09813.24211.6333.364
123522_A891A892:U920U921_22-0.433-1.0613.267-5.3555.05831.604-2.777-0.1523.0949.1339.66832.43
123622_A892U893:A919U920_220.267-1.2073.031-0.25911.50428.664-4.193-0.5462.37922.1410.49930.843
127622_A900G902:A907U909_22-1.114-0.9746.40111.18119.262101.483-1.1621.0246.10412.336-7.161103.236
127722_A933U935:G876A944_222.6690.433-0.207-78.98146.75444.6010.545-1.166-0.89577.01441.447167.659
119722_A966A967:U632U633_22-1.503-2.0053.228-2.181.80234.725-3.6182.1843.2093.0143.64534.836
119822_A967U968:G631U632_220.336-1.0363.1625.5184.18635.137-2.2620.2133.0396.852-9.03235.792
120122_A970A971:G628U629_225.639-1.613.088-4.357-0.09432.473-2.841-10.6252.336-0.1687.74832.756
120222_A971G972:C627G628_220.543-0.8043.817-0.8919.5963.75-1.225-0.5533.6689.0260.83964.397
120422_A973A974:C625U626_22-0.174-1.4632.987-4.3871.92526.579-3.576-0.6352.8674.1449.44527.0
120522_A974C975:G624C625_220.121-1.4822.992.1244.71439.54-2.6580.0412.8056.933-3.12439.863
128022_A979G980:C1021C1022_220.358-1.2484.023-1.8279.09449.32-2.258-0.583.73810.7872.16750.131
128422_A983G984:U1017U1018_220.161-2.0822.827-2.51613.82317.806-8.558-1.0030.9537.9056.89922.646
128922_A992A993:G1011U1012_22-2.7611.1615.022-112.556-132.861-43.1840.985-2.7091.01567.846-57.477-174.542
129022_A993G994:C1010G1011_220.237-0.6213.13-6.4437.39160.039-0.95-0.5273.0057.3336.39260.761
129222_A995U996:G1008U1009_220.519-1.723.496-4.1310.86437.627-2.769-1.3593.3831.3346.38137.854
129422_A1036C1037:G1094U1095_220.812-1.8373.192.1981.41131.695-3.604-1.0923.1552.578-4.01631.8
129622_A1061U1063:U1056U1058_226.072-3.442-0.37261.394136.769-72.9811.7783.0960.292-73.82433.138-155.914
129822_A1065C1066:G1053U1054_221.116-2.063.206-2.1642.76432.578-4.102-2.332.9484.9093.84332.762
130222_A1069C1070:G1048U1049_220.077-1.7523.1393.6761.78328.77-3.8630.6093.0143.566-7.35129.053
130922_A1076C1077:G1041G1042_221.096-1.1392.9691.5762.44925.758-3.149-2.052.915.47-3.52125.919
131922_A1113U1115:A1131A1132_22-3.1771.4751.191-122.541-129.698163.6730.8031.5261.336-64.85561.276179.777
132122_A1116U1117:U313G1130_22-3.323-2.1372.524-1.8536.92732.582-4.575.5672.21612.1633.25433.341
11622_A1138A1139:U8G16_22-2.79-1.4553.2212.4452.1863.914-26.48342.6740.51126.64-29.7995.106
11722_A1139G1140:C14U8_223.474-1.2844.135-10.51413.35793.7-1.158-2.5843.6629.0967.1694.874
12022_A1142A1143:A11U12_220.0-1.863.6534.7037.0241.332-3.3620.523.2899.822-6.5842.149
12122_A1143U1144:G10A11_22-0.991-2.0823.1111.1873.51229.849-4.6652.1312.8126.785-2.29330.073
12522_A1147C1148:G1629U1630_220.1-1.2773.3224.15512.39729.901-4.320.5062.59322.71-7.61232.575
12822_A1151A1152:U1626U1627_22-1.234-1.3433.463-2.413.31735.902-2.6581.6313.4035.3593.89436.128
12922_A1152G1153:C1625U1626_22-0.061-1.7662.652-4.496-1.71928.917-3.182-0.6832.728-3.4138.92429.306
13422_A1157C1618:C1620U1621_221.667-2.735-0.851-130.64-97.574171.146-1.387-0.808-0.826-48.80265.34178.697
134822_A1203U1560:U1551G1553_221.528-0.091-5.654-20.142-2.756-52.102-0.1693.578-4.8083.011-22.003-55.668
136222_A1211G1212:C1451U1452_221.123-1.5883.8155.71816.28827.822-5.868-0.932.67930.446-10.68732.653
136722_A1219C1220:G1263G1264_220.583-0.4863.5-0.437-5.3665.31-0.212-0.5583.522-4.9580.40465.506
136922_A1221C1222:G1261U1262_220.299-0.8572.948-3.0822.91432.212-1.985-1.0132.8225.2245.52532.483
137122_A1223A1224:U1259U1260_220.529-1.7213.4528.60517.41634.308-4.5540.1982.40227.011-13.34539.281
137522_A1234G1245:U1250U1251_221.885-2.475-0.515-97.413-139.31166.108-1.26-0.927-0.397-69.68548.728178.791
137722_A1236G1237:C1248U1249_220.744-1.3943.7959.0079.51334.402-3.6870.2183.38815.41-14.5936.741
138522_A1275U1276:A1436U1437_220.374-1.4073.022-1.4812.65140.351-2.304-0.6912.9133.8362.14440.46
140022_A1296G1297:A1300U1301_22-4.581-1.743.1371.79910.35556.178-2.3314.8842.6710.89-1.89257.074
140822_A1336A1410:G1387U1415_225.1253.7593.962115.458-40.6831.8953.5621.13.659-29.737-84.393122.424
141422_A1344A1345:U1380U1381_22-0.733-0.72.8923.4684.27935.254-1.6771.6292.717.013-5.68335.668
141522_A1345A1348:U1377U1380_221.5211.2294.77914.50720.953100.0520.314-0.6475.04113.517-9.359102.398
141622_A1348G1349:C1376U1377_22-0.031-0.8932.813-17.4097.75226.297-2.742-2.5072.10114.81733.27432.377
142522_A1357G1358:C1365U1366_22-0.166-1.382.8243.21113.13931.17-4.0140.6882.06523.135-5.65533.912
142822_A1391U1392:A1406U1407_22-0.633-1.7293.4284.63410.19534.032-4.2291.6742.70816.862-7.66435.776
140922_A1410C1338:G1386G1387_22-3.103-1.4390.224121.633-125.473-170.9050.727-1.5440.31262.74260.822-179.584
134522_A1469C1470:G1574G1170_22-0.4480.512.93-0.244-0.22726.9281.1480.9062.93-0.4880.52426.93
143322_A1471C1472:G1536U1538_221.604-2.4943.61-8.53410.466-75.3311.6561.0024.013-8.498-6.93-76.355
143622_A1475C1476:G1531U1532_221.198-1.6423.3076.815.81139.619-3.02-0.9633.1998.443-9.89440.578
144022_A1479G1480:C1527U1528_22-0.963-2.2614.1169.95813.37329.492-6.2223.3932.45224.005-17.87433.788
144222_A1487G1488:C1518U1519_220.868-1.5021.971-20.791-13.03721.711-1.268-3.781.367-26.08941.60632.655
135822_A1569A1570:G1541G1542_22-0.063-0.0722.605-7.383.55529.239-0.708-1.0652.5196.87414.2730.34
135922_A1570C1571:G1540G1541_220.674-0.8193.601-3.8278.32664.836-1.129-0.7943.4457.7253.55165.411
132722_A1576A1577:U1168G1169_220.952-1.4664.1082.4269.93857.211-2.159-0.8233.86110.287-2.51158.042
132822_A1577U1578:G1167U1168_220.345-1.3912.8460.518-0.1243.615-1.862-0.422.853-0.161-0.69843.618
145222_A1586A1587:U1609G1610_22-0.227-0.3922.931-3.3161.32864.285-0.4180.0862.9311.2473.11464.374
145322_A1587G1588:U1608U1609_22-0.256-1.7683.689-0.09213.75231.184-5.2640.4232.69424.1640.16234.013
145822_A1592A1593:U1603U1604_220.49-0.9013.5081.26110.01343.351-2.159-0.5253.24513.34-1.6844.455
145922_A1593G1594:C1602U1603_22-0.852-1.613.125-0.5822.55229.222-3.6941.5662.9925.0461.1529.337
147122_A1648G1649:C1751U1752_22-0.222-1.4693.03-4.0394.06432.133-3.253-0.2392.8347.277.22532.627
147422_A1651C1652:G1748A1749_22-0.29-1.3253.49-1.2282.25741.049-2.1440.2733.4223.2151.7541.126
147822_A1655U1656:A1744G1745_221.958-0.513.503-3.20420.19154.69-1.637-2.1923.0521.1683.35958.109
148122_A1659A1660:U1741U1742_22-0.726-2.0723.2422.6822.63533.491-3.9851.6713.014.555-4.63733.695
148222_A1660U1661:A1740U1741_22-0.479-1.4053.057-3.964.85327.008-3.9980.132.80610.2188.33827.711
148922_A1667G1668:C1733U1734_220.568-1.4453.3942.0913.46929.49-4.846-0.6662.54324.855-3.85732.424
149322_A1671G1672:C1729A1730_22-0.268-0.9343.067-1.9391.65355.178-1.0980.1823.0471.7842.09355.232
150022_A1678G1679:A1722U1723_22-1.98-0.9923.3463.9155.43755.48-1.3692.3373.1085.817-4.18955.852
150322_A1681U1682:A1719G1720_22-2.104-1.909-0.63294.038-127.537154.679-1.0071.014-0.555-63.974-47.171175.305
146122_A1756G1757:C1644G1645_22-0.018-2.0953.448-8.27328.45539.18-4.438-0.531.62936.7510.68448.77
146622_A1762A1763:C1639C1640_22-1.055-1.2883.414-5.485-6.8642.971-1.0120.8433.669-9.2497.39643.818
146722_A1763C1764:G1638C1639_22-0.723-1.2823.3484.6624.2343.909-2.091.3893.1295.623-6.19744.336
151122_A1776G1777:C1784U1785_22-0.28-1.1093.021-2.0196.65835.669-2.6120.1962.78810.7433.25836.319
11222_C4U5:A19G20_22-0.616-1.8522.9682.2152.78930.833-3.9311.5252.7445.224-4.14931.033
13722_C36U37:A471U472_220.432-2.3063.1593.218-4.88528.872-3.459-0.143.519-9.671-6.37129.447
13922_C38A39:C469A470_22-1.483-1.1373.3349.37618.99641.993-2.8712.5772.28324.714-12.19846.817
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1317955_U3047U3051:A3091A3094_55-5.628-0.2383.77815.5430.761106.828-0.1583.7033.1960.472-9.646107.609
1318055_U3051G3052:U3090A3091_551.54-1.2143.099-5.33713.0826.373-4.592-3.9011.95126.39610.77129.859
1318355_U3054U3055:A3086G3088_55-0.485-1.9935.872-4.76421.81569.821-2.9140.1385.16518.5894.0672.871
1321855_U3064G3065:C3076A3077_55-0.148-1.7243.197-3.36920.96227.28-5.565-0.1761.53237.996.10534.444
1322055_U3066C3067:G3074G3075_550.259-1.7632.9315.8146.57723.911-5.5790.8072.36515.232-13.46625.449
1319955_U3100G3101:C3133A3134_55-1.152-1.8383.386-0.316-8.72430.621-1.5752.0383.766-16.1130.58331.813
1320355_U3104A3106:G3128A3129_553.063-1.5036.16211.23227.21125.992-8.45-2.0183.9845.696-18.86139.079
1320555_U3107G3108:C3126A3127_55-0.01-1.6972.798-3.1876.98930.442-4.188-0.462.34913.0515.95231.374
1320955_U3121G3112:A3122A3123_551.4153.8713.687-172.5551.054-21.611-1.954-1.6722.059-0.545-89.3-172.691
1322455_U3160C3161:G3289G3290_55-0.414-1.2393.1445.0076.78322.112-5.042.4992.50516.914-12.48623.646
1323255_U3169A3170:U3280U3281_55-0.319-1.4574.33625.2317.10628.03-3.3594.5082.73711.894-42.2338.197
1324155_U3192C3193:G3199G3200_550.137-1.9223.0892.1168.46825.848-5.8880.1622.35518.28-4.56827.258
1324555_U3222A3223:U3262G3263_55-0.56-2.883.989-6.93510.89310.934-16.365-2.2760.96542.126.80316.905
1325055_U3231G3232:U3255G3256_550.381-1.7582.982-0.65416.77419.227-7.426-0.9971.10241.4311.61525.472
1325555_U3236U3237:U3250U3251_55-0.334-2.4933.170.71710.85921.978-8.5490.9651.74826.494-1.74824.495
1325655_U3237G3238:C3249U3250_550.047-1.5423.3235.9857.84234.892-3.5470.7392.88912.766-9.74436.218
1326255_U3297C3298:G3390A3391_550.295-2.3613.709-0.745.8532.18-5.275-0.6613.23410.4451.32232.702
1326555_U3300U3301:U3313A3314_550.808-1.2243.805-0.03114.96345.61-2.828-0.9993.27218.7180.03847.877
1326655_U3301U3302:U3312U3313_55-0.556-2.7792.9-1.62415.64712.712-11.4731.216-0.26851.0195.29520.2
1326755_U3302G3303:C3311U3312_55-0.609-0.5713.0324.96313.05640.192-1.9741.2912.64118.342-6.97242.455
1327955_U3329A3330:U3373U3374_550.475-1.2843.3050.41612.76342.504-2.842-0.5932.82917.148-0.55944.295
1328155_U3331U3332:G3371A3372_550.127-1.0582.8743.0771.60838.259-1.7830.1422.832.448-4.68338.411
1328255_U3332G3333:A3370G3371_550.9260.1192.6772.7159.52756.303-0.309-0.8462.70210.01-2.85357.098
1329255_U3346A3347:U3358A3359_550.551-1.3543.3841.76110.08330.227-4.258-0.6912.82418.675-3.26231.875
1134241_A2A2994:A1A2386_410.524-3.175-2.713169.333-14.4766.364-1.677-1.2440.64-7.642-89.394169.966
1163744_A40A41:G103A105_44-0.456-0.2662.9961.762-5.126117.904-0.1080.2822.997-2.991-1.028117.981
1163844_A41G42:U102G103_441.038-0.7443.662-8.73712.39854.715-1.532-1.6213.25113.2089.30856.622
1164044_A43A44:U100U101_44-0.364-1.6763.62.663-3.79237.497-2.0410.9473.712-5.872-4.12337.772
1164144_A44C45:G58U100_440.866-1.3432.9820.5322.49243.781-2.012-1.1142.9153.338-0.71343.851
1164844_A65A66:U93C94_440.234-1.0753.5761.2562.96447.724-1.582-0.1813.5123.658-1.55147.826
1164944_A66U67:A92U93_44-0.818-1.3233.3860.4864.11441.03-2.3291.2143.2345.851-0.69141.23
1164244_C45G46:C57G58_441.157-1.9643.2864.3967.41628.621-5.286-1.3712.84114.588-8.64729.865
1164444_C47C62:U55G56_44-1.185-2.5983.38510.44410.81747.376-3.8332.1212.47413.082-12.63149.573
1165544_C115G116:C137G107_44-1.743-3.7043.119-0.3490.0288.793-24.20610.5513.1740.1832.2758.8
1165744_C117C118:G135G136_44-0.563-2.4743.213-1.9374.93623.219-7.4740.7862.67412.0624.73423.809
1165844_C118C119:G134G135_44-0.602-1.9333.478-2.2558.71534.21-4.470.6592.94514.5053.75335.34
1165944_C119C120:G133G134_44-0.03-1.8772.8715.9376.68429.578-4.5860.9982.35112.731-11.30930.871
1166044_C120U121:G132G133_440.504-1.6063.35.1049.68135.641-3.749-0.142.82715.376-8.10737.231
1163944_G42A43:U101U102_44-0.551-2.3812.998-7.5927.37830.193-5.468-0.1752.42713.64714.04331.955
1164344_G46C47:G56C57_44-0.562-1.3443.22-3.6463.68238.768-2.440.4133.1225.5175.46339.099
1164544_G49C50:G75C76_440.319-1.3412.9310.0455.02332.677-3.092-0.5542.7018.862-0.0833.051
1164644_G63U64:A96A97_44-0.495-2.7813.598-11.9287.99328.757-6.506-1.3022.73614.97222.34432.074
1165144_G68U69:A89C91_440.943-1.373.07-0.260.00733.961-2.346-1.6533.0620.0120.44633.962
1165344_G70A71:G87A88_440.335-1.8744.7974.062-0.872-7.60815.46616.53.8676.01328.024-8.667
1165444_G114C115:G107C108_44-0.183-2.2613.215-2.2470.59332.243-4.164-0.063.1791.0674.03932.324
1165644_G116C117:G136C137_440.584-1.4563.245-2.592.90539.62-2.465-1.153.0924.2733.80939.803
1166344_G123G124:C129C130_440.376-1.7213.0921.597-0.88329.554-3.189-0.4143.157-1.73-3.12629.609
1164744_U64A65:C94A96_443.376-2.2892.574-17.535-3.06633.915-3.276-6.4380.969-4.86327.81138.18
1165044_U67G68:C91A92_44-0.305-1.6173.5850.5817.96332.494-4.1780.6313.10713.97-1.0233.435
1165244_U69G70:A88A89_440.751.1762.8623.3369.09462.650.757-0.5813.0228.69-3.18863.319
1166144_U121U122:A131G132_44-0.003-1.7593.4342.2817.58927.922-5.8020.3561.99932.618-4.22732.985
1166244_U122G123:C130A131_44-0.384-1.7963.286-3.99211.77627.96-5.5290.012.38422.9867.79230.55
1333277_A27C28:G52U53_770.393-1.3543.1279.8060.71232.819-2.4110.8323.0851.226-16.88834.222
1330977_A63G65:C15U16_770.123-1.9163.5782.05211.69827.893-5.9930.1722.58522.992-4.03430.27
1331177_A66G67:U111U14_773.526-1.0523.4022.24-2.3858.308-0.945-3.493.56-2.441-2.29758.391
1331777_A72C74:C105U106_770.314-1.3793.9432.3175.03256.232-1.794-0.1773.8265.325-2.45256.482
1332077_A76U78:A102A103_77-3.0021.6630.815-125.013-126.025161.70.8821.4510.953-63.02462.518179.604
1332277_A79G80:C100G101_77-0.305-1.0843.391-4.7721.71165.602-1.070.083.3781.5774.39765.775
1332777_A84G85:A95U96_77-1.298-0.9882.7533.805-0.93324.069-2.1024.0462.556-2.218-9.04924.381
1330177_C6G7:U114G115_772.319-2.673.5676.55512.7914.365-12.958-3.8241.60340.259-20.63220.293
1333177_C26A27:U53U54_772.191-1.8732.16-12.249-5.16727.676-2.958-5.5341.406-10.09723.93530.647
1333377_C28C29:G49G52_775.284-0.9052.91312.606-11.05862.894-0.352-4.3653.894-10.403-11.8664.87
1333477_C29G30:C47G49_770.194-2.3665.91-20.44131.92745.551-5.151-1.9493.39135.01722.41958.609
1333877_C36G37:U43G41_77-3.75-1.064.1518.704-1.56-2.8345.02910.4034.236.77181.208-18.98
1330477_C58U59:A20G21_77-0.011-1.5413.477-6.749.15832.299-4.071-1.0482.8915.86211.67334.191
1331377_C68C69:G109G110_77-0.55-2.3063.326-4.79310.44328.706-6.1810.1842.41820.0779.21530.875
1331477_C69U70:A108G109_770.309-1.9863.451-2.6754.83428.35-5.06-1.2163.0369.7545.39728.873
1331877_C74G75:A104C105_77-2.442-0.4333.2329.2332.92952.215-0.6593.2822.7673.296-10.38953.044
1329677_G1G2:U119C120_770.215-2.2552.687-3.5512.31520.323-7.039-1.7922.3476.479.92420.756
1329777_G2U3:A118U119_770.225-1.6543.386-0.778.47340.583-3.229-0.3992.99212.0561.09641.428
1330077_G5C6:G115C116_770.442-1.7793.291-2.6768.29731.825-4.454-1.2052.70814.7864.7732.968
1330277_G7G8:C113U114_77-1.242-1.6323.089-6.3086.02441.061-2.8681.122.9818.4738.87241.938
1330377_G8C9:G112C113_770.593-0.7312.7140.2752.47129.953-1.825-1.0982.6514.77-0.53130.054
1333577_G30U31:A46C47_770.463-1.9793.372.8137.96527.824-5.617-0.3332.74216.101-5.68629.054
1333977_G37U38:A42U43_77-1.435-1.8283.3537.7061.62427.283-4.0844.6152.7423.356-15.92128.376
1330677_G60G61:C18C19_77-0.067-1.8253.433-3.1827.16836.36-3.817-0.3193.02711.3255.02737.168
1330777_G61U62:A17C18_77-0.142-1.3163.0713.1892.99731.886-2.8660.782.9115.423-5.77132.178
1331077_G65A66:U14C15_77-0.875-2.0763.41-3.7139.52840.356-3.9190.8452.93313.555.2841.579
1331277_G67C68:G110U111_770.689-1.3252.882-4.9327.2738.955-2.642-1.4832.50310.7367.28339.896
1331677_G71A72:U106C107_77-0.606-0.9582.9620.771-0.21137.962-1.4471.022.955-0.324-1.18537.97
1331977_G75A76:A103A104_77-3.1190.659-1.2483.605149.879166.470.3961.522-1.34274.965-41.816179.014
1332377_G80U81:G99C100_770.597-1.9453.320.1170.0732.473-3.491-1.0463.3180.125-0.20832.473
1332577_G82U83:A97C98_771.03-1.6563.441.03211.12932.06-4.585-1.6052.7619.428-1.80233.904
1332877_G85G87:C94A95_771.272-2.4033.521-4.179-0.08628.542-4.806-3.5323.312-0.1748.41928.84
1332977_G87G88:C93C94_77-0.555-1.8693.406-0.1770.537.778-2.9530.8333.3840.7720.27437.782
1333077_G88G89:A92C93_77-2.681-1.5422.662-6.132-4.29552.163-1.4942.6733.046-4.8566.93252.66
1329877_U3U4:A117A118_77-0.058-1.5243.08-3.4733.52131.019-3.423-0.4912.8836.5316.44231.401
1329977_U4G5:C116A117_77-0.826-1.533.2091.19913.14333.279-4.1911.5012.42121.907-1.99835.732
1333677_U31U32:A45A46_77-0.569-1.5093.254-1.73210.68429.564-4.6310.752.59320.1083.2631.441
1333777_U32C36:G41A45_77-2.1842.843.078-1.596-5.083133.6731.5761.1783.037-2.7640.868133.726
1330577_U59G60:C19A20_77-0.171-1.5132.877-0.0671.63230.793-3.1220.312.7963.0710.12630.835
1330877_U62A63:U16A17_77-0.648-1.1083.037-3.5320.1227.729-4.5280.6331.89436.3846.38334.322
1331577_U70G71:C107A108_77-0.039-1.4942.778-0.6732.59331.682-3.122-0.0312.654.7381.2331.792
1332177_U78A79:G101A102_775.435-1.4143.481-2.2842.752-14.5272.59718.5244.466-10.673-8.858-14.958
1332477_U81G82:C98G99_77-2.156-2.7013.165-4.03813.4319.202-10.0124.2041.41634.86510.48423.739
1332677_U83A84:U96A97_770.157-2.0073.5685.84721.85241.292-4.2660.2682.28928.559-7.64246.844
1223588_A33C32:G331G330_550.8941.811-3.406-6.736-13.656-30.699-5.0332.484-2.18924.028-11.851-34.186
1334088_A40A41:G103A105_88-0.2-0.2663.068-3.439-6.237122.045-0.0990.0853.077-3.5631.965122.168
1334188_A41G42:U102G103_880.715-0.4873.776-7.0728.62856.302-1.042-1.1833.5679.0457.41357.308
1334388_A43A44:U100U101_88-0.388-1.6643.4860.7691.937.963-2.8090.6983.3932.918-1.18138.017
1334488_A44C45:G58U100_880.321-1.2043.056-6.5183.11839.751-2.064-1.1352.8724.5419.49140.376
1335188_A65A66:U93C94_88-0.318-0.7213.372-0.0070.00252.225-0.8190.3613.3720.0020.00752.225
1335288_A66U67:A92U93_88-0.44-1.5913.735-4.6717.09638.019-3.3410.0333.42310.7297.06338.922
1224088_C28U27:A336G335_550.8472.422-3.6867.943-9.106-28.216-6.473-0.046-2.9117.68915.429-30.646
1223888_C30U29:A334G333_550.8462.412-3.4986.064-9.508-23.523-7.860.276-2.48921.7913.897-26.052
1223688_C32G31:C332G331_55-0.4861.882-3.136-0.47-6.702-35.06-3.953-0.732-2.74711.001-0.771-35.678
1334588_C45G46:C57G58_880.824-1.9323.0710.5692.17829.902-4.146-1.4852.9414.214-1.10229.985
1334788_C47C62:U55G56_88-0.655-2.4323.1698.90414.23945.679-3.8941.3812.20517.654-11.03948.513
1335888_C115G116:C137G107_88-1.687-3.5633.221.261.6736.429-35.67118.4221.86714.421-10.866.761
1336088_C117C118:G135G136_88-1.25-2.3643.099-2.579.29325.224-7.0632.1282.21720.3565.6326.976
1336188_C118C119:G134G135_88-0.725-2.1062.996-2.1414.7429.799-4.8771.012.6819.134.12530.239
1336288_C119C120:G133G134_88-0.036-2.1063.443-0.1957.56829.125-5.5680.0312.81914.7370.37930.072
1336388_C120U121:G132G133_880.046-1.8733.3712.00711.59538.898-3.9320.1472.72516.946-2.93340.573
1223788_G31C30:G333C332_55-0.0051.917-3.3810.229-9.623-32.103-4.837-0.044-2.70916.9310.402-33.479
1334288_G42A43:U101U102_88-0.72-2.4143.294-8.518.20732.011-5.358-0.0542.70914.28714.81434.071
1334688_G46C47:G56C57_88-0.448-1.5373.281.202-0.44235.475-2.4560.9123.282-0.725-1.97235.498
1334888_G49C50:G75C76_880.249-1.2282.8985.4163.91429.347-3.0620.4852.7167.602-10.51930.082
1334988_G63U64:A96A97_88-0.312-2.8943.783-14.5117.88233.843-5.615-1.5752.94812.64923.28637.55
1335488_G68U69:A89C91_881.03-1.4953.058-2.8956.11232.086-3.575-2.2632.63510.9065.16732.772
1335688_G70A71:G87A88_880.352-1.714.712-0.339-6.689-3.34238.2031.4230.59363.43-3.214-7.484
1335788_G114C115:G107C108_88-0.149-2.5813.218-0.6234.30634.84-4.8830.1592.897.1571.03635.102
1335988_G116C117:G136C137_880.551-1.4263.117-3.8433.2241.178-2.332-1.1582.9414.5575.4441.469
1336688_G123G124:C129C130_880.06-1.8363.6218.24910.43234.479-4.3621.0592.90216.844-13.31936.882
1224285_U26C339:G25G337_850.4053.2950.85-153.11979.376-42.24-1.6630.179-0.773-40.796-78.696-172.977
1224188_U27U26:G337A336_55-0.5261.511-2.455-9.069-2.804-28.319-3.3760.403-2.355.538-17.911-29.837
1223988_U29C28:G335A334_55-0.5661.688-2.898-6.3140.166-33.334-2.87-0.054-2.961-0.286-10.886-33.91
1335088_U64A65:C94A96_883.857-2.1272.779-13.4441.19231.25-3.756-7.91.02.09523.62533.973
1335388_U67G68:C91A92_88-0.581-1.423.2283.2844.22938.538-2.6241.2543.0046.37-4.94638.895
1335588_U69G70:A88A89_88-0.2311.2512.7710.99611.96555.8720.7260.2912.95712.608-1.04957.046
1336488_U121U122:A131G132_880.351-2.2572.8871.28110.21621.887-7.789-0.5391.69525.189-3.15724.161
1336588_U122G123:C130A131_88-0.392-1.4593.351-1.2863.50429.276-3.6120.4953.1726.8972.53129.508

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.