A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
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NDB ID: 4U53  PDB ID: 4U53 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A39A40:G467C469_221.264-2.4663.773-1.213-10.942-7.8919.324.3780.32654.144-6.003-13.538
14122_A40A41:U466G467_220.279-0.2343.589-1.80310.48663.403-0.711-0.3473.5089.9031.70364.198
14222_A41A438:G465U466_220.1280.1643.771-5.3955.79275.011-0.068-0.2933.7594.7444.41975.366
14922_A46G48:C431G432_22-2.892-2.2042.61365.64-131.368118.56-0.4891.7742.607-67.672-33.813163.243
16022_A67G69:U82G83_221.0080.0013.774-5.736.62263.571-0.324-1.2313.6656.2545.41264.108
17022_A103C309:G357U358_221.325-2.2153.209-6.4518.51698.62-1.586-0.972.9945.6044.24599.047
16922_A105A103:U358C308_223.23-4.32-2.445.00492.23812.286-0.172-3.322-2.77176.484-37.317103.157
17722_A108G109:C305U306_220.236-0.9722.858-2.9248.76826.77-3.666-1.0422.38718.266.08928.294
18122_A112U113:A301U302_22-1.166-1.252.5819.1411.87117.486-5.6534.8630.86832.378-24.9322.989
18422_A119U120:U297C298_222.974-1.3743.585-9.7086.61454.506-1.855-3.7482.8877.12810.46355.663
18922_A124U125:U292U293_220.952-1.1673.201-1.1544.78341.53-2.114-1.453.0286.7161.62141.807
19122_A138G142:A173A266_225.871-1.5313.941-5.9391.02579.287-1.229-4.7753.550.8024.64879.478
19522_A145U146:A168A169_22-0.241-1.0233.455-16.143.736.125-1.969-1.6523.1645.61824.50639.624
19722_A147A148:C166U167_221.389-2.1343.8691.14112.02151.457-3.274-1.483.35513.631-1.29352.76
19822_A148C149:G165C166_223.622-2.813.486-4.01516.79341.798-4.97-5.0361.93622.4235.36245.076
110822_A188C189:G196A197_220.856-1.2933.4374.812-2.96858.838-1.149-0.6053.547-3.013-4.88659.085
111322_A206U207:C258U259_220.192-1.3143.6011.1821.16333.144-4.488-0.1452.37933.213-1.85239.181
111722_A210U211:A254U255_220.613-2.2053.601-6.0686.29226.343-6.126-2.7512.80113.34712.87227.732
112022_A213G214:A251U252_22-1.034-0.883.057-8.74118.99265.611-1.4390.6162.84417.0847.86368.505
113522_A265U267:A288U289_22-1.624-0.8572.924-2.4561.02746.354-1.1661.8722.9831.3043.11746.426
17522_A312A315:A352A353_224.893-0.4543.1444.01-13.7835.62812.875-14.0072.828-65.965-19.1915.413
114322_A316C317:G347U348_220.386-1.9153.5032.4937.19933.124-4.448-0.2553.05112.423-4.30233.965
114622_A323U324:A344U345_22-0.294-1.3873.6242.29620.13440.085-3.6950.62.65227.362-3.1244.728
115122_A328G329:C339U340_22-0.043-1.6863.0972.7883.61627.656-4.2630.692.8397.499-5.78328.023
115422_A366A367:U374U375_22-0.319-1.7073.2573.4474.22734.23-3.4891.0442.9867.125-5.8134.649
115522_A367U368:G373U374_22-0.342-1.6753.2512.21511.84835.789-3.9940.7912.56318.64-3.48537.702
115622_A399A401:C394U395_22-0.22-1.7393.179-2.684-2.57139.59-2.2610.0153.288-3.7863.95239.757
115722_A401G404:C393C394_223.599-1.4943.768-0.0454.67574.506-1.397-2.973.683.8580.03774.631
116122_A407C408:G389G390_22-1.3081.3632.6877.1535.347-19.048-5.627-1.0552.535-15.12820.235-21.02
116422_A410C411:G422G423_220.982-1.0362.938-9.5777.68223.702-3.849-4.1261.97617.29521.56226.652
14322_A438U439:A464G465_22-3.27-3.9652.38217.5560.2745.585-12.38710.066-2.4481.13-72.48318.418
14522_A441C442:G462U463_22-1.018-2.3923.1343.1383.40140.074-3.8211.8012.8454.943-4.5640.329
15822_A452G63:C87U88_22-2.924-2.0352.9641.3657.93854.645-2.5973.2252.68.594-1.47755.19
1122_A468G595:C31U32_221.689-2.9733.313-0.30211.99879.972-2.594-1.3122.9149.2880.23480.717
117222_A485U504:A483U502_221.1766.3923.11-146.52281.533-56.539-3.612-0.131-0.35-42.339-76.087-169.153
117422_A505U508:G480A481_22-0.082-3.9693.62926.6310.26376.632-3.0810.8463.450.206-20.89480.451
117822_A511A538:G540A477_22-2.261-4.544-4.027-26.14496.837168.876-2.1261.173-4.29948.54713.107172.879
118022_A515G516:C536G537_221.38-0.2484.294-11.11815.7661.208-1.109-1.9213.85915.08210.6463.892
118222_A518A520:U532A534_220.471-3.8324.30111.5843.05146.735-5.4130.0330.87244.368-11.93463.711
118722_A550G557:C587U588_22-1.885-0.7053.0954.6161.24538.118-1.2123.3892.8331.897-7.03438.405
1622_A599U600:A26U27_221.199-1.2982.9737.295-2.1725.006-2.294-0.7093.284-4.868-16.37126.121
1822_A601U602:G23U24_22-0.486-0.672.692-11.3878.56139.038-1.7-0.3172.53712.32316.39141.46
11122_A604C4:G20U21_22-3.656-0.1044.7710.128-3.03257.660.1114.4634.131-3.115-10.40558.539
119722_A615G616:C1105U1106_22-0.198-1.6783.549-0.2166.2529.165-4.6070.3393.13112.2340.42329.814
119922_A622G1032:U1103U1104_220.944-3.2512.4121.617-3.385.084-12.467-0.4123.923-32.848-15.7156.315
121022_A630G631:U968C969_221.328-1.9723.039-14.5652.58150.993-2.356-2.3012.5042.92816.52352.957
126922_A746C747:G802U805_223.953-0.94.729-33.489-7.49764.703-0.457-4.7162.741-6.5529.26172.357
127622_A760G761:A789U790_22-0.55-0.8973.5534.289-0.30560.04-0.8780.7763.515-0.305-4.2860.179
127822_A774G775:U785C786_220.668-4.708-2.034128.28-113.597-49.5841.049-1.145-4.14158.46266.019-172.147
128122_A814G816:A855U857_224.4180.8440.636-111.197100.386146.1150.4-2.241-0.15550.61356.064171.295
121622_A865G866:C962U965_223.036-1.483.6999.5143.10148.44-2.049-2.7814.0933.733-11.45349.402
122022_A869C870:G957U958_220.658-0.9883.0284.1254.11743.317-1.691-0.522.9745.547-5.55943.688
123122_A881U882:U946U947_220.73-0.7083.059-12.876-7.25745.377-0.338-1.8622.839-9.12516.19147.602
123422_A884G885:C927U928_22-0.554-1.4123.3087.8698.24428.91-4.1192.452.58215.762-15.04431.031
123722_A887U888:A924G925_220.236-0.8163.492-10.8687.79132.451-2.565-2.0792.99413.2618.49835.029
124122_A891A892:U920U921_22-0.451-1.0493.221-3.7564.06834.875-2.3170.2023.1136.7366.21835.299
124222_A892U893:A919U920_220.483-1.4852.934-4.08510.74219.637-6.758-2.3611.75828.5510.85722.724
128522_A900G902:A907U909_22-0.563-0.8026.5218.44419.21893.34-1.220.6796.26413.081-5.74895.136
128622_A933U935:G876A944_222.8380.047-0.168-67.115155.73329.9370.467-1.233-1.08781.41235.086169.934
129022_A979G980:C1021C1022_22-0.077-1.0674.121-5.82114.52549.484-2.422-0.3923.67916.8716.76151.751
129422_A983G984:U1017U1018_22-0.235-2.2122.89-1.76412.76415.608-10.090.1450.86839.3735.44320.214
129922_A992A993:G1011U1012_22-3.5040.9514.622-109.893-126.466-61.310.735-2.8131.00965.53-56.943-169.288
130022_A993G994:C1010G1011_220.459-0.2622.969-8.9427.83157.24-0.636-0.8912.8218.0789.22558.359
130222_A995U996:G1008U1009_220.603-1.6823.5442.2011.49637.125-2.85-0.633.5052.346-3.45137.216
130522_A998U999:A1005C1006_220.088-1.8933.4114.33411.1241.484-3.6440.2962.83115.321-5.97143.094
130622_A1036C1037:G1094U1095_221.222-1.7643.1026.8845.72535.814-3.52-1.0542.9719.134-10.98436.881
130822_A1065C1066:G1053U1054_221.259-2.2133.061-6.2973.32530.119-4.704-3.412.56.28811.9130.93
131222_A1069C1070:G1048U1049_220.058-1.7163.554-1.17.63532.522-4.285-0.2883.07913.3991.9333.401
131922_A1076C1077:G1041G1042_221.402-1.0892.8981.391-3.06424.54-1.686-2.8823.082-7.165-3.25424.766
133022_A1113U1115:A1131A1132_221.0573.813-0.089-126.623121.017-117.346-1.7970.644-1.048-60.753-63.567-177.48
133222_A1116U1117:U313G1130_22-3.297-2.0252.622-0.1768.91439.966-3.624.7032.15412.8490.25340.909
11622_A1138U8:U15G16_22-0.5030.512.2066.825-19.74913.7794.5612.3310.686-53.829-18.60424.987
12022_A1142A1143:A11U12_220.262-1.6733.5872.6134.49842.619-2.765-0.083.4116.161-3.57942.92
12122_A1143U1144:G10A11_22-0.572-2.0673.225-0.8917.07629.488-5.2590.9292.68413.6511.71830.32
12522_A1147C1148:G1629U1630_22-0.202-1.0883.4015.89114.97233.169-3.7071.1012.61624.513-9.64536.766
12822_A1151A1152:U1626U1627_22-1.255-1.4143.335-3.6031.90131.774-2.9151.6073.3653.4546.54832.027
12922_A1152G1153:C1625U1626_220.376-1.4933.3031.5691.62530.647-3.137-0.4023.2363.069-2.96430.728
13422_A1157A1160:U1617U1621_224.91-0.5313.824-5.742-9.328114.368-0.199-2.9883.686-5.5433.412114.705
13522_A1160C1161:G1616U1617_22-0.136-1.2623.6291.0871.65633.492-2.4840.4313.5582.871-1.88433.549
135922_A1203A1556:U1552G1553_220.342-3.604-3.011165.853-50.814124.76-1.984-0.762-2.029-25.516-83.282176.971
137422_A1211G1212:C1451U1452_221.477-1.3013.60211.28710.41631.515-3.926-0.5493.34217.908-19.40434.973
137922_A1219C1220:G1263G1264_220.544-0.6853.601-3.2040.05369.456-0.603-0.6043.5750.0462.8169.52
138122_A1221C1222:G1261U1262_220.217-0.8953.215-12.571.7731.303-1.822-2.3492.8663.12522.18833.719
138322_A1223A1224:U1259U1260_220.043-1.7113.5397.40420.31435.109-4.5590.7112.23230.383-11.07441.053
138422_A1230U1231:U1254U1257_226.3630.5181.85712.55215.95753.888-0.155-6.0873.17716.946-13.33157.317
138822_A1234G1245:U1250U1251_22-1.6522.759-0.23498.119130.176-160.974-1.358-0.843-0.429-65.1849.129-177.202
139022_A1236G1237:C1248U1249_220.942-1.393.9295.66617.65931.853-4.922-0.6232.91229.282-9.39636.737
139222_A1238U1239:C1246U1247_221.872-1.8392.6935.66213.741101.42-1.346-1.1342.5748.844-3.644102.206
141422_A1296G1297:A1300U1301_22-4.594-2.0163.5035.252.28255.416-2.2915.2213.0122.447-5.62955.687
142622_A1344A1345:U1380U1381_22-0.384-0.1052.8871.4153.00635.632-0.5520.8042.8524.899-2.30635.781
142722_A1345A1348:U1377U1380_221.2521.4485.0314.66617.678102.6770.519-0.4635.26811.225-9.313104.501
142822_A1348G1349:C1376U1377_220.434-1.0532.757-11.9047.20322.097-3.845-3.4581.85916.81827.79326.066
143722_A1357G1358:C1365U1366_220.105-1.7272.885.25113.26526.415-5.4360.6251.81326.696-10.56829.961
144022_A1391U1392:A1406U1407_22-0.891-1.4433.4917.18810.31835.332-3.5812.3172.75116.373-11.40737.435
135622_A1469C1470:G1574G1170_22-0.3520.3492.962-4.4493.73927.68-0.086-0.2313.0017.7099.17128.272
144622_A1471C1472:G1536U1538_221.48-2.5633.2951.0569.335-79.9921.7291.1753.511-7.2390.819-80.45
144822_A1475C1476:G1531U1532_221.09-1.7433.1445.1583.26739.083-2.946-1.0293.1074.847-7.65339.538
145222_A1479G1480:C1527U1528_22-0.319-1.8763.9261.34710.46824.0-7.2111.0992.84823.758-3.05726.187
145422_A1487G1488:C1518U1519_220.317-1.3762.703-14.346-3.42423.233-2.199-3.6052.298-7.59831.83727.465
136022_A1556U1560:U1551U1552_222.9753.6-1.728166.4226.508-15.81-1.435-0.853-3.71-14.03288.097-168.627
137022_A1569A1570:G1541G1542_220.319-0.3122.829-6.6337.54636.62-1.299-1.2112.62111.7410.32137.927
137122_A1570C1571:G1540G1541_220.519-0.8683.39-4.6024.11462.171-1.029-0.7153.2913.9734.44562.446
133822_A1576A1577:U1168G1169_221.631-1.2523.9845.86116.54260.582-2.092-1.2483.69416.038-5.68262.84
133922_A1577U1578:G1167U1168_220.311-1.4973.0455.3378.20640.603-2.8750.0652.72311.623-7.55941.718
146222_A1586A1587:U1609G1610_22-0.44-0.7212.757-5.366-2.64157.945-0.6220.2112.811-2.7185.52358.226
146322_A1587G1588:U1608U1609_220.229-1.6413.608-1.46616.58138.461-4.056-0.4762.69823.8562.1141.783
146822_A1592A1593:U1603U1604_220.352-0.6793.235-3.1415.90243.249-1.459-0.7643.0897.954.23143.738
146922_A1593G1594:C1602U1603_22-0.654-1.3192.876-2.9027.68331.848-3.4390.7382.54513.7185.18132.863
148722_A1655U1656:A1744G1745_222.164-0.7653.462-7.25615.857.807-1.541-2.5162.91715.9537.32660.148
149022_A1659A1660:U1741U1742_22-0.927-2.1473.238-1.1920.6629.254-4.3881.5783.2241.3062.35929.285
149122_A1660U1661:A1740U1741_22-0.503-1.5373.158-0.524-0.40431.249-2.7780.8383.185-0.750.97231.256
149822_A1667G1668:C1733U1734_220.316-1.6343.1931.04810.73829.944-4.743-0.4052.48319.983-1.9531.787
150222_A1671G1672:C1729A1730_22-0.399-0.8083.263-6.6794.42355.248-1.1180.0433.2194.7427.1655.78
150922_A1678G1679:A1722U1723_22-1.805-1.0183.3882.00511.42657.697-1.631.9443.09511.71-2.05558.753
147222_A1749A1750:U1650A1651_22-1.129-2.2483.1675.383-0.72615.543-7.3897.3842.724-2.584-19.15916.459
147322_A1750C1751:G1649U1650_220.987-1.163.0043.912.59832.097-2.498-1.1333.04.667-7.02532.429
147622_A1753A1754:C1646U1647_22-1.058-2.6871.609-147.80792.47-120.2421.113-0.8991.658-46.434-74.221-177.185
147722_A1754A1756:G1645C1646_22-3.264-2.7732.42882.14-104.589171.474-1.3221.6842.434-52.34-41.106176.602
147822_A1756G1757:C1644G1645_220.462-2.2692.974-3.98325.46631.56-5.192-0.9660.90239.5956.19240.539
148322_A1762A1763:C1639C1640_22-1.78-0.8853.654-3.935-5.56843.771-0.5751.9373.871-7.4145.2444.273
148422_A1763C1764:G1638C1639_22-0.835-1.423.2912.1554.92145.525-2.2411.2553.0896.333-2.77345.825
151922_A1776G1777:C1784U1785_22-0.381-0.9532.987-6.8456.85932.776-2.598-0.3242.75911.83711.81234.141
11222_C4U5:A19G20_22-0.669-1.732.8888.9181.98827.89-3.7762.9292.4363.991-17.90429.32
13722_C36U37:A471U472_220.817-2.0613.460.0765.07226.157-5.799-1.7543.01511.074-0.16526.635
13922_C38A39:C469A470_22-1.219-1.0842.795.22313.76642.605-2.3941.9642.19918.304-6.94544.965
15122_C49C50:G429G430_221.153-3.03.3049.9781.06719.495-8.3411.1233.322.914-27.25521.904
15222_C50U52:A428G429_22-4.564-0.7373.4343.69317.22856.729-1.614.8072.84617.666-3.78759.184
16322_C97U98:A385G386_220.444-0.7833.649-9.89512.60730.764-3.371-2.3592.85321.99117.26134.598
16522_C99C361:G383G384_22-0.957-1.8393.34-4.6511.65735.716-4.2760.9052.72818.3237.30937.789
17622_C107A108:U306G307_22-0.198-1.3663.044-1.838.80235.996-3.1930.0942.65513.9752.90537.066
19922_C149U150:A164G165_220.345-1.8754.011-2.1628.45337.371-4.085-0.843.49512.9773.31838.34
110522_C184U185:A200G201_22-0.314-1.3422.8043.26512.4217.481-7.1381.7731.45735.324-9.28621.661
110722_C186A188:A197G199_22-0.89-1.9676.835-9.55813.27248.299-4.197-0.3366.1915.70611.31150.836
110922_C189C190:G195G196_22-0.068-2.6423.2877.45918.25819.437-8.6371.410.57742.436-17.33727.623
111022_C190C191:U193G195_222.139-1.7363.533-28.2838.4558.064-4.127-6.849-1.51221.49871.91230.577
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1317755_U3047U3051:A3091A3094_55-5.853-0.7573.5511.401-7.331110.797-0.3693.6833.172-4.443-6.91111.349
1317855_U3051G3052:U3090A3091_551.495-1.3852.9880.01612.82827.156-4.855-2.8882.13125.586-0.03329.982
1318155_U3054U3055:A3086G3088_55-0.782-1.7776.008-9.90319.0871.47-2.5530.0885.51115.9818.29474.219
1321655_U3064G3065:C3076A3077_550.274-1.6133.321-7.30319.97131.425-4.75-1.2491.89532.61711.92837.793
1321855_U3066C3067:G3074G3075_550.167-1.6233.0366.877.62930.192-4.1750.7942.53714.141-12.73531.851
1319755_U3100G3101:C3133A3134_55-1.426-2.0883.1635.157-14.10127.757-0.9933.6723.484-27.033-9.88631.488
1320155_U3104A3106:G3128A3129_552.925-1.4986.15210.30726.44527.924-8.017-2.0534.14643.18-16.8339.614
1320355_U3107G3108:C3126A3127_55-0.433-1.6292.598-5.4671.96630.41-3.354-0.0242.5283.70510.30430.947
1320755_U3111G3112:A3122U3121_550.708-1.0194.16211.55415.03211.371-9.6573.5311.83147.032-36.1522.081
1322255_U3160C3161:G3289G3290_55-0.052-1.5372.8444.3957.86825.464-4.91.0092.23717.178-9.59526.987
1323055_U3169A3170:U3280U3281_55-0.183-1.0244.46421.2597.56225.438-3.3664.8373.03514.136-39.7433.879
1323255_U3171A3174:C3278A3279_551.372-6.679-1.183-139.91710.98-58.8883.4990.7691.013-6.255-79.705-145.642
1324055_U3192C3193:G3199G3200_550.118-1.8463.1083.9767.67127.963-5.120.5262.51615.415-7.9929.241
1324455_U3222A3223:U3262G3263_55-0.862-2.5854.923-2.84411.2415.684-14.7080.7592.61335.5328.99219.482
1324955_U3231G3232:U3255G3256_550.765-1.9623.03-2.54215.23920.596-7.513-2.2371.2136.6836.1225.696
1325455_U3236U3237:U3250U3251_55-0.132-2.4533.181-4.80115.78120.457-8.523-0.6581.05337.52511.41726.223
1325555_U3237G3238:C3249U3250_55-0.477-1.4663.1734.6124.44734.343-3.0721.4462.8817.45-7.72834.918
1326155_U3297C3298:G3390A3391_550.367-2.5063.834-2.12712.0834.231-5.787-0.92.79219.7543.47836.3
1326455_U3300U3301:U3313A3314_550.436-1.1193.428-2.9598.65646.636-2.099-0.7843.15310.8123.69547.476
1326555_U3301U3302:U3312U3313_55-0.84-2.8733.4085.12119.4218.908-10.9463.102-1.34264.129-16.9121.953
1326655_U3302G3303:C3311U3312_55-0.089-0.2412.975-2.88515.09238.949-1.769-0.1482.70521.6384.13741.761
1327855_U3329A3330:U3373U3374_550.243-1.2663.0667.2419.36837.976-2.8470.4022.69113.987-10.8139.714
1328055_U3331U3332:G3371A3372_550.051-1.2892.8832.2652.66737.216-2.3160.1792.7854.168-3.5437.374
1328155_U3332G3333:A3370G3371_550.8180.2742.6392.5847.44253.683-0.072-0.7682.6868.19-2.84454.216
1329155_U3346A3347:U3358A3359_550.672-1.8123.373.59213.73125.699-6.288-0.6212.20928.288-7.40129.3
153944_A37G39:A104C106_44-0.4282.5562.196-8.33820.81134.8361.2870.1942.39311.2444.505135.744
154144_A40A41:G103A105_44-0.385-0.2782.898-6.208-2.965118.294-0.1360.1692.913-1.7263.614118.418
154244_A41G42:U102G103_440.722-0.6913.754-11.74812.12859.219-1.315-1.3263.38512.0111.63361.369
154444_A43A44:U100U101_44-0.494-1.7763.6512.969-1.95332.96-2.7441.4273.69-3.43-5.21433.145
154544_A44C45:G58U100_440.606-1.0392.934-0.8210.31845.15-1.378-0.8552.9160.4141.0745.158
1165044_A65A66:U93C94_440.139-0.7933.4870.0750.68156.097-0.885-0.1443.4780.724-0.0856.101
1165144_A66U67:A92U93_44-1.054-1.7123.488-1.2987.84137.046-3.6651.4553.10812.1692.01537.86
154644_C45G46:C57G58_441.061-1.7843.8166.07511.30723.987-6.901-0.5922.8825.041-13.45427.161
154844_C47C62:U55G56_44-1.351-2.4373.1788.5956.98250.55-3.2182.072.5968.065-9.92951.671
1165744_C115G116:C137G107_44-1.428-3.972.955-6.627-1.2414.621-23.517-13.1773.432-10.23354.6668.172
1165944_C117C118:G135G136_44-0.816-2.5293.395-8.33610.09623.244-7.944-0.2552.27622.87718.8926.634
1166044_C118C119:G134G135_44-0.298-1.8973.321.0962.10136.817-3.2820.6193.2013.322-1.73336.89
1166144_C119C120:G133G134_44-0.061-2.0793.0722.0349.90625.658-6.3620.5372.12521.282-4.36927.548
1166244_C120U121:G132G133_440.456-1.7223.2723.7736.30937.515-3.399-0.2382.9859.696-5.79938.203
154044_G39A40:A105A104_44-2.36-3.0893.8959.465-15.398-128.4891.847-1.2223.7788.5325.244-129.175
154344_G42A43:U101U102_44-0.827-2.4112.869-11.5435.24832.23-4.759-0.1532.5939.02819.8634.573
154744_G46C47:G56C57_44-0.583-1.0353.151-13.0563.42142.02-1.696-0.433.1024.6317.66844.041
1164744_G49C50:G75C76_440.563-1.5283.0650.1073.45131.496-3.38-1.0132.8876.333-0.19731.68
1164844_G63U64:A96A97_44-0.634-3.0363.599-15.76610.21428.535-6.823-1.452.42518.41628.42534.056
1165344_G68U69:A89C91_440.967-1.7253.14-6.519-0.8228.125-3.289-3.2972.895-1.65913.18728.867
1165544_G70A71:G87A88_440.105-1.9284.6213.419-1.551-5.34225.97220.8613.26914.50931.979-6.529
1165644_G114C115:G107C108_44-0.566-2.2723.0481.5383.84934.936-4.2711.142.7636.384-2.55135.173
1165844_G116C117:G136C137_440.774-1.583.3236.0881.48341.71-2.353-0.4333.3432.068-8.49242.157
1166544_G123G124:C129C130_440.5-1.9043.0796.6150.25732.976-3.3320.1683.1040.447-11.50933.616
1164944_U64A65:C94A96_443.724-2.2962.558-14.055-6.33126.548-3.612-8.681.012-12.53427.82430.629
1165244_U67G68:C91A92_44-0.294-1.5443.4921.6845.20438.449-2.980.6553.2487.854-2.54238.822
1165444_U69G70:A88A89_440.7821.2412.8634.7277.19463.6470.89-0.5533.0196.788-4.46164.166
1166344_U121U122:A131G132_440.737-2.3183.3121.86512.78823.987-7.656-1.1691.90328.294-4.12627.202
1166444_U122G123:C130A131_44-0.505-1.5982.605-2.797.1631.997-3.7430.5332.2412.764.97232.883
1333177_A27C28:G52U53_770.431-1.5192.978.1421.37534.847-2.6540.3722.9332.257-13.36535.782
1330877_A63G65:C15U16_770.05-1.713.165-8.45811.75125.117-5.655-1.7072.05724.58617.69728.933
1331077_A66G67:U111U14_773.68-0.9753.697.5260.07457.804-1.006-3.3064.0980.076-7.74958.25
1331677_A72C74:C105U106_770.279-1.0893.71.8824.09957.145-1.386-0.1763.6274.278-1.96457.307
1331977_A76U78:A102A103_77-3.321-1.530.941130.661-122.25-150.0210.864-1.5551.26561.13765.344-179.724
1332177_A79G80:C100G101_77-0.351-1.3223.553-3.5592.75459.309-1.4830.163.5082.7793.59159.464
1332677_A84G85:A95U96_77-1.139-0.8122.9731.959-0.56320.149-2.0814.0362.871-1.604-5.58220.25
1330077_C6G7:U114G115_772.173-2.8323.4376.20110.63711.72-15.631-3.8341.39940.235-23.45616.983
1333077_C26A27:U53U54_772.146-1.5682.763-14.567-7.47326.064-1.865-6.1881.728-14.85128.94930.704
1333277_C28C29:G49G52_775.292-0.9862.93213.599-10.30167.286-0.468-4.1333.909-9.147-12.07569.167
1333377_C29G30:C47G49_770.473-2.5535.59-23.4328.78641.855-5.291-2.582.83933.52427.28755.383
1333777_C36G37:C44G41_77-1.709-1.8833.15318.3-1.934-32.0483.2670.0093.4853.19630.237-36.836
1330377_C58U59:A20G21_770.08-1.8273.184-7.236.89828.175-4.846-1.5192.57613.63914.29529.861
1331277_C68C69:G109G110_77-0.284-2.2583.184-4.9018.92525.165-6.771-0.4672.27819.49710.70527.116
1331377_C69U70:A108G109_770.387-1.93.572-0.726.58925.68-5.919-1.0382.98714.5181.58626.508
1331777_C74G75:A104C105_77-2.45-0.3943.28510.393.7654.68-0.6253.1862.7844.047-11.18455.701
1329577_G1G2:U119C120_770.138-2.1772.747-1.1036.69222.188-7.137-0.6282.00316.8882.78323.189
1329677_G2U3:A118U119_770.399-1.3383.207-0.29510.01440.423-2.875-0.592.80914.2290.41941.596
1329977_G5C6:G115C116_770.255-1.6213.236-4.9545.89634.787-3.461-1.0982.879.7148.16335.603
1330177_G7G8:C113U114_77-1.104-1.6463.042-1.5837.8341.733-2.9821.3812.74210.8712.19842.457
1330277_G8C9:G112C113_770.338-0.8782.766-1.2553.66829.234-2.373-0.8862.6227.2282.47229.484
1333477_G30U31:A46C47_770.462-2.0953.5814.27311.28132.524-5.259-0.1162.76119.331-7.32334.632
1333877_G37U38:A42C44_77-1.933-1.6054.7798.4739.3250.017-2.7233.0224.08210.826-9.84251.48
1330577_G60G61:C18C19_770.054-1.7943.401-9.7720.57935.406-2.931-1.4693.2440.9315.70136.693
1330677_G61U62:A17C18_77-0.071-1.3873.0961.5895.60333.362-3.2060.3552.8269.668-2.74133.853
1330977_G65A66:U14C15_77-0.915-2.3483.354-1.8835.46842.325-3.7671.073.0787.5312.59342.701
1331177_G67C68:G110U111_770.585-1.4142.838-7.3888.85442.324-2.582-1.3562.3811.99810.01243.797
1331577_G71A72:U106C107_77-0.454-0.6653.0964.437-1.32542.389-0.7891.0463.054-1.825-6.11442.629
1331877_G75A76:A103A104_77-1.237-2.819-1.67-148.83185.98943.997-0.9711.384-0.94144.26376.611172.477
1332277_G80U81:G99C100_770.403-2.0493.121.735-0.68435.4-3.269-0.4173.174-1.123-2.8535.447
1332477_G82U83:A97C98_770.765-1.3413.3952.76210.61830.743-4.205-0.8912.84319.273-5.01332.597
1332777_G85G87:C94A95_771.07-2.5923.459-2.3661.58131.825-5.004-2.3853.2442.8774.30431.949
1332877_G87G88:C93C94_77-0.445-1.8573.27-2.877-2.33634.211-2.7670.2933.411-3.9574.87234.405
1332977_G88G89:A92C93_77-2.714-1.4972.733-2.096-7.26755.871-1.2252.7712.982-7.7162.22656.34
1329777_U3U4:A117A118_77-0.669-1.7123.275-9.9765.13231.218-3.862-0.4973.039.17317.83233.125
1329877_U4G5:C116A117_77-0.442-1.6533.073.58812.62532.071-4.421.2092.2221.749-6.18134.588
1333577_U31U32:A45A46_77-0.821-1.5343.217-3.6098.70127.57-4.8250.92.70117.6197.30829.105
1333677_U32C36:G41A45_77-2.162.8062.7062.015-9.512133.7761.5761.1842.589-5.169-1.095133.952
1330477_U59G60:C19A20_77-0.508-1.3462.9244.2846.38730.517-3.4911.6132.50511.898-7.98131.449
1330777_U62A63:U16A17_77-0.553-0.8333.2344.98920.86828.687-4.0951.5562.06236.383-8.69735.688
1331477_U70G71:C107A108_770.388-1.6632.969-4.8372.99730.388-3.63-1.5482.7045.6569.12630.904
1332077_U78A79:G101A102_775.3-1.3953.546-1.812-0.242-8.9149.47228.3244.491.538-11.497-9.099
1332377_U81G82:C98G99_77-1.528-2.423.307-5.90417.37919.142-8.972.0881.16641.82914.20926.461
1332577_U83A84:U96A97_77-0.018-1.8483.6364.75622.37343.4-3.9310.3822.44728.057-5.96448.799
1223588_A33C32:G331G330_550.7011.77-3.536-5.062-15.744-32.607-4.9061.789-2.33526.057-8.377-36.459
1333988_A40A41:G103A105_88-0.25-0.1133.083-2.903-1.154122.184-0.0550.1183.087-0.6591.658122.207
1334088_A41G42:U102G103_880.876-0.6813.714-10.19810.89255.282-1.371-1.5323.34111.50710.77357.107
1334288_A43A44:U100U101_88-0.298-1.5863.324-3.277-1.57937.368-2.2520.0223.399-2.4585.137.539
1334388_A44C45:G58U100_880.163-1.2783.1870.753-1.34239.877-1.72-0.1533.229-1.966-1.10439.905
1335088_A65A66:U93C94_88-0.33-0.4743.384-2.035-2.22355.299-0.3750.2323.408-2.3942.1955.374
1335188_A66U67:A92U93_88-0.66-1.9443.821-8.6975.65536.113-3.871-0.2813.5468.89813.68637.526
1224088_C28U27:A336G335_550.8612.65-3.06110.315-8.088-29.762-5.989-0.052-2.43514.87118.966-32.461
1223888_C30U29:A334G333_550.5882.616-3.77910.752-15.294-21.728-8.634-1.156-1.7233.64923.657-28.591
1223688_C32G31:C332G331_55-0.6091.947-3.082-0.361-12.226-34.108-4.591-0.938-2.27920.06-0.592-36.174
1334488_C45G46:C57G58_881.322-1.983.3182.8844.64429.373-4.794-1.9743.0899.059-5.62629.866
1334688_C47C62:U55G56_88-0.512-2.4763.617.64621.43746.865-3.9671.5872.06624.599-20.24954.071
1335788_C115G116:C137G107_88-1.81-3.3643.405-0.9752.0637.072-32.48310.8842.54616.1797.6467.43
1335988_C117C118:G135G136_88-1.275-2.4253.041-3.4138.61424.835-7.1992.0292.24119.1977.60626.482
1336088_C118C119:G134G135_88-0.407-2.3092.9931.9873.00425.352-5.9511.4092.6676.801-4.49825.603
1336188_C119C120:G133G134_880.223-1.7853.7491.6317.21531.428-4.607-0.0863.27613.094-2.95932.265
1336288_C120U121:G132G133_880.411-2.0523.250.6114.91439.02-4.281-0.522.35221.399-0.87541.673
1223788_G31C30:G333C332_550.1561.96-3.515-3.852-4.068-30.842-4.4221.039-3.1947.571-7.169-31.334
1334188_G42A43:U101U102_88-0.642-2.4423.425-7.7149.59533.371-5.367-0.0432.71916.04612.90135.509
1334588_G46C47:G56C57_88-0.188-1.6133.0171.33-2.57234.782-2.3240.5033.116-4.293-2.2234.899
1334788_G49C50:G75C76_880.112-1.1522.8680.283.87334.856-2.41-0.1512.7296.441-0.46635.065
1334888_G63U64:A96A97_88-0.177-3.1823.698-13.9060.78430.961-5.604-2.2363.3861.38424.55133.879
1335388_G68U69:A89C91_880.799-1.373.0011.1024.08927.597-3.71-1.4232.8028.509-2.29327.914
1335588_G70A71:G87A88_880.182-1.9354.6070.555-5.341-4.89836.9983.6921.67247.4024.922-7.267
1335688_G114C115:G107C108_880.024-2.3863.2215.2762.39935.403-4.2060.6883.033.912-8.60535.86
1335888_G116C117:G136C137_880.134-1.5523.09-2.3795.32740.306-2.77-0.4332.8587.6823.4340.708
1336588_G123G124:C129C130_88-0.206-1.7593.4669.62913.13136.769-4.0181.3652.58519.675-14.42840.099
1224285_U26C339:G25G337_850.3743.182-1.049-155.51276.573-165.782-1.5610.249-1.173-38.298-77.779-179.176
1224188_U27U26:G337A336_55-0.4591.366-2.9173.576-10.053-29.398-4.098-1.407-2.26819.0376.771-31.234
1223988_U29C28:G335A334_55-0.1241.568-2.47-15.1499.252-35.649-1.4191.275-2.626-14.087-23.067-39.695
1334988_U64A65:C94A96_884.083-1.9252.491-11.8515.78932.139-3.674-7.7570.6429.94920.36834.674
1335288_U67G68:C91A92_88-0.183-1.3563.0057.38-1.34541.788-1.7480.9452.973-1.867-10.24742.427
1335488_U69G70:A88A89_880.0311.1212.788-1.11214.95759.1060.463-0.0782.96714.9031.10860.812
1336388_U121U122:A131G132_880.534-1.9662.7759.3378.18424.807-5.6660.6652.09617.703-20.19827.697
1336488_U122G123:C130A131_88-0.03-1.6063.334-10.1247.26823.59-5.301-2.4642.53716.39222.83426.638

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.