A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: 4U55  PDB ID: 4U55 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A39A40:G467C469_221.727-2.2443.655-6.77-8.033-3.5723.677-1.2410.60754.51-45.936-11.094
14122_A40A41:U466G467_220.067-0.6953.619-2.91312.6962.068-1.273-0.2043.42812.1642.79263.285
14222_A41A438:G465U466_220.3540.1793.639-1.4941.62173.6210.092-0.3483.6351.3531.24773.649
15822_A67G69:U82G83_220.959-0.2453.959-4.8588.12665.456-0.617-1.1143.8377.4744.46866.062
16022_A93A399:U395G396_22-1.835-0.1962.923-6.2172.276-4.207-2.838-25.0810.171-19.799-54.095-7.843
17822_A103C309:G357U358_221.323-2.173.146-7.4767.14992.728-1.618-1.042.9244.9275.15293.172
17722_A105A103:U358C308_223.462-4.572-2.38141.4194.37128.427-0.455-3.228-3.39372.305-31.727105.818
18522_A108G109:C305U306_220.104-1.0343.089-4.5666.73228.833-3.266-1.0572.73413.1918.94729.935
18922_A112U113:A301U302_22-1.028-1.2232.906-4.63916.77220.246-6.1361.2681.63239.56210.94326.638
19222_A119U120:U297C298_222.518-1.5793.268-10.9999.9850.468-2.363-3.4852.37811.42312.5952.47
19722_A124U125:U292U293_220.515-1.3833.371.4136.12942.651-2.489-0.5623.1668.372-1.9343.091
110122_A162G163:G151U152_220.543-3.3270.909-177.76821.86513.566-1.668-0.306-0.83110.98189.275179.114
110322_A164G165:C149U150_220.24-2.083.5939.8468.02228.887-5.3741.4512.85615.189-18.64131.501
110722_A168A169:A145U146_220.395-1.1873.55415.0361.72838.224-1.9031.253.4142.522-21.94141.007
110822_A169A171:U144A145_222.262-2.453.8130.5828.74469.047-2.504-1.963.5377.682-0.51169.532
110922_A171C172:G143U144_221.719-1.8783.163-8.8846.65821.492-6.153-6.3321.68216.51122.03124.16
111122_A173U174:A266G142_22-1.363-2.4053.52-0.409-4.55185.156-1.6620.9963.625-3.3610.30285.255
111722_A188C189:G196A197_220.734-1.023.3472.725-10.71461.717-0.471-0.5763.491-10.355-2.63462.603
112122_A206U207:C258U259_220.787-1.4583.7381.81218.06235.75-4.322-0.9322.75527.358-2.74539.96
112522_A210U211:A254U255_220.399-2.1683.7227.5968.53428.488-5.8890.8362.9716.526-14.7130.649
112822_A213G214:A251U252_22-0.932-0.5773.174-5.53720.49262.701-1.3340.642.94719.1225.16665.848
113022_A218U843:A829U830_220.6460.042-4.976151.39923.509-115.2390.188-1.023-4.574-12.06577.699-165.748
113122_A220A221:U832U841_221.323-1.0652.819-3.095-2.698-2.67931.623-6.5281.7937.384-42.88-4.902
113222_A221A222:U839U832_22-1.792-4.0533.4572.7566.32555.663-4.6662.0612.9336.745-2.93956.055
113322_A222U223:G838U839_220.043-1.032.96-1.0419.94531.598-3.249-0.2262.52617.7171.85533.104
113622_A225A226:U835U836_22-0.573-1.6593.647-8.20222.05724.968-6.191-0.2781.76441.18315.31434.182
113722_A226U227:G834U835_221.439-1.5332.7591.466-0.89345.157-1.927-1.7612.83-1.162-1.90845.187
114122_A265U267:A288U289_22-1.976-0.7492.6972.5931.12947.158-1.0092.6372.5731.409-3.23847.238
18322_A312A315:A352A353_225.206-0.492.9386.097-25.056.4477.685-9.2012.374-74.035-18.01926.562
114822_A316C317:G347U348_220.149-2.0063.1826.7287.89229.957-4.9920.8482.55714.724-12.55131.663
115122_A323U324:A344U345_22-1.054-1.1583.225-6.82721.61237.741-3.4720.8062.40330.3079.57343.81
115622_A328G329:C339U340_220.186-1.7213.2464.1783.53428.27-4.2260.5293.0097.151-8.45428.785
115922_A366A367:U374U375_22-0.595-1.4893.1023.9847.11229.464-4.0761.8282.5813.657-7.6530.546
116022_A367U368:G373U374_22-0.087-1.292.880.11410.00240.592-2.6880.1322.50714.159-0.16141.755
16122_A399A401:C394U395_22-0.052-1.6433.103-2.662-0.83540.038-2.303-0.2143.132-1.2183.88340.131
16222_A401G404:C393C394_223.61-1.5053.5561.033.00173.685-1.358-2.9733.5442.502-0.85873.744
16622_A407C408:G389G390_22-1.3341.4182.7365.2234.944-13.013-8.985-1.4582.394-19.94321.071-14.861
16922_A410C411:G422G423_220.786-1.0232.836-5.5533.84725.27-3.118-2.9742.438.59912.41226.143
14322_A438U439:A464G465_22-3.549-3.6622.6518.1345.3810.041-9.8569.529-2.66917.716-59.71321.394
14522_A441C442:G462U463_22-0.712-2.4453.224-0.2066.54735.936-4.7361.112.75510.5040.3336.509
15622_A452G63:C87U88_22-2.589-2.0362.6750.633-0.71550.341-2.3513.082.672-0.841-0.74450.349
1122_A468G595:C31U32_221.764-2.8923.553-8.2657.74278.821-2.475-1.6083.1386.0686.47879.499
116722_A477C479:G509A511_22-0.415-3.1786.419-11.739-1.53147.916-3.583-1.2546.439-1.85214.20249.273
117022_A481A483:U504A505_22-0.343-3.8695.01514.90617.26741.836-6.6512.0143.00622.307-19.25647.405
117122_A483A485:U502U504_220.138-3.415.988-10.8513.51860.01-3.664-1.0725.73.48310.74460.985
117222_A485G487:U501U502_222.049-1.8856.78532.323-4.9545.692-1.3442.2096.926-5.612-36.64755.673
117522_A515G516:C536G537_221.656-0.3223.879-3.0914.00759.65-0.556-1.843.774.0213.10159.845
117722_A518C519:U533A534_22-0.857-2.8262.192-5.32641.348-16.71-1.097-1.7453.326-68.546-8.829-44.775
117922_A520U522:C531U532_220.053-0.7725.34319.48913.7557.023-1.8131.4474.85113.759-19.50261.422
118522_A550G557:C587U588_22-1.29-0.8422.74-4.5530.07642.032-1.1741.3882.8570.1056.32542.267
1622_A599U600:A26U27_221.152-1.3073.0410.7385.76426.547-4.077-2.2872.73112.365-1.58327.164
1822_A601U602:G23U24_22-0.25-0.9162.927-7.0878.79638.986-2.18-0.332.67112.85510.35740.528
11122_A604C4:G20U21_22-3.576-0.2014.56825.7584.06758.326-0.4074.7672.8993.964-25.10763.419
119522_A615G616:C1105U1106_22-0.11-1.9153.52-0.5677.92232.993-4.5690.0962.99513.7020.98133.91
119722_A622G1032:U1103U1104_220.993-3.1843.131.4426.772.854-32.587-5.862-1.49466.141-14.0847.487
126822_A746C747:G802U805_223.556-1.5564.223-27.3972.88756.012-1.655-4.8112.3432.88927.41661.925
127522_A760G761:A789U790_22-1.014-0.9623.5642.113-2.11961.312-0.8331.1023.559-2.077-2.07161.378
127722_A774G775:U785C786_220.913-4.449-2.424129.299-108.774-66.3531.059-0.936-4.30955.99166.556-170.77
128022_A814G816:A855U857_224.8852.1132.064-124.523101.36362.6220.879-2.7-1.00553.60665.854163.415
121522_A865G866:C962U965_222.942-1.2743.3210.4945.5645.695-2.107-3.723.1837.128-0.63446.017
121922_A869C870:G957U958_22-0.129-1.4293.627-7.6757.43343.122-2.637-0.5983.3249.93210.25644.365
123022_A881U882:U946U947_220.695-0.8392.991-7.208-6.01944.213-0.599-1.4962.933-7.8929.4545.15
123322_A884G885:C927U928_22-0.5-0.8963.2925.028-4.17829.638-0.861.9823.257-8.044-9.68230.334
123622_A887U888:A924G925_22-0.307-0.9583.68-9.6798.57833.23-2.949-1.0573.314.34316.18235.592
124022_A891A892:U920U921_22-0.633-1.663.276-3.8782.82929.667-3.7780.4333.1635.487.51130.044
124122_A892U893:A919U920_220.594-1.1643.359-0.7169.83732.162-3.584-1.1422.87517.2561.25533.603
128522_A900G902:A907U909_22-0.73-0.7236.2311.35517.50498.378-0.9920.8146.00111.47-7.441100.004
128622_A933U935:G876A944_222.7890.4660.252-76.023153.43-2.246-0.7081.1630.826-80.566-39.92-171.234
120222_A966A967:U632U633_22-1.719-2.3043.173-3.3896.8336.151-4.4972.2882.8510.8575.38836.92
120322_A967U968:G631U632_220.438-1.3533.1960.3655.66537.322-2.786-0.6332.9718.789-0.56637.736
120622_A970A971:G628U629_225.94-1.4173.3573.1962.81335.174-2.78-9.2523.7444.634-5.26535.423
120722_A971G972:C627G628_220.907-0.4423.467-5.2016.92466.405-0.685-1.0363.3426.2944.72866.903
120922_A973A974:C625U626_22-0.302-1.7193.024-10.8624.17322.312-5.061-2.1922.5369.95925.92525.13
121022_A974C975:G624C625_220.339-1.443.1466.1513.58842.133-2.3190.1223.0374.948-8.48342.704
129022_A979G980:C1021C1022_220.239-1.2164.1352.1114.76752.755-2.412-0.1043.70416.253-2.32254.678
129422_A983G984:U1017U1018_22-0.104-1.7852.9071.71914.6621.62-6.8450.571.41534.393-4.03426.128
129922_A992A993:G1011U1012_22-3.241.0545.002-119.863-126.868-58.130.79-2.8661.15764.455-60.896-175.224
130022_A993G994:C1010G1011_220.341-0.383.248-6.4248.64357.055-0.843-0.6883.1148.966.6657.978
130222_A995U996:G1008U1009_220.849-1.9733.542-3.3196.98838.598-3.778-1.6643.07210.4454.9639.336
130422_A1036C1037:G1094U1095_221.027-2.0563.2295.2573.24532.985-4.086-0.9333.145.654-9.15933.543
130822_A1065C1066:G1053U1054_221.024-1.6643.144-0.4094.68938.013-3.083-1.6082.9157.1660.62538.293
131222_A1069C1070:G1048U1049_220.149-1.9563.263-5.838-1.45329.841-3.434-1.4613.264-2.78611.19330.428
131922_A1076C1077:G1041G1042_221.053-1.0462.7055.7443.87923.967-3.397-0.9952.689.101-13.47424.935
132922_A1113U1115:A1131A1132_222.012-2.7461.31121.177126.901-81.1010.9381.4221.306-64.02461.136-176.554
133122_A1116U1117:U313G1130_22-3.515-1.9962.602-0.1087.09935.837-3.9125.5992.1911.3990.17336.511
11622_A1138A1139:U8G16_22-2.349-1.53.0716.6361.2797.862-9.74320.4790.6457.707-40.00110.364
11722_A1139G1140:C14U8_223.38-1.2513.895-12.06817.71193.345-1.199-2.5283.32912.0518.21195.215
12022_A1142A1143:A11U12_220.259-1.7673.363-0.674-0.31940.344-2.525-0.4533.372-0.4620.97740.35
12122_A1143U1144:G10A11_22-0.906-1.93.1242.602-0.3930.735-3.52.1843.062-0.734-4.89930.845
12522_A1147C1148:G1629U1630_22-0.243-1.3173.3072.94513.9732.948-4.0120.792.5323.316-4.91435.83
12822_A1151A1152:U1626U1627_22-1.503-1.3493.435-1.3120.06638.21-2.0682.1213.480.1012.00438.232
12922_A1152G1153:C1625U1626_22-0.034-1.7642.664-7.736-3.12128.07-2.92-1.3492.751-6.26115.5229.259
13422_A1157A1160:U1617U1621_225.214-0.3483.405-6.246-14.042114.63-0.052-3.1543.238-8.3223.701115.289
13522_A1160C1161:G1616U1617_220.064-1.2023.587.0082.10231.475-2.5661.2353.4293.811-12.70432.293
135822_A1203U1560:U1551G1553_221.097-0.059-5.28-19.807-3.124-59.937-0.1652.453-4.7443.037-19.252-62.906
137222_A1211G1212:C1451U1452_221.078-1.7713.6673.73118.03527.868-6.074-1.2642.2633.245-6.87733.303
137722_A1219C1220:G1263G1264_220.399-0.5583.4521.0311.23663.508-0.587-0.3313.4471.175-0.97963.527
137922_A1221C1222:G1261U1262_220.203-1.0463.215-11.027.0628.204-3.228-2.3662.62413.59921.22831.037
138122_A1223A1224:U1259U1260_220.153-1.8793.4866.08925.50936.405-4.6070.3081.85135.709-8.52344.606
138522_A1234G1245:U1250U1251_222.5241.6010.207137.286-93.84457.9711.028-0.9431.132-48.908-71.549168.019
138722_A1236G1237:C1248U1249_221.305-1.4973.4775.8385.00829.349-3.937-1.2423.3729.677-11.2830.319
138922_A1238U1239:C1246U1247_222.15-1.8052.8910.36711.555104.575-1.275-1.2252.8847.277-6.529105.384
139622_A1275U1276:A1436C1431_220.82-4.0013.6297.72319.191-22.6251.7913.8894.975-39.83116.03-30.565
141122_A1296G1297:A1300U1301_22-4.295-1.8353.3656.8255.59960.133-2.0694.5582.7455.555-6.77160.718
142822_A1375C1376:G1349U1350_220.727-1.8793.3696.613-13.03727.115-0.510.1673.915-25.583-12.97730.74
143322_A1382G1383:C1342U1343_22-0.233-1.4773.38-4.0660.16627.231-3.146-0.5443.3690.3498.57527.527
143722_A1388C1389:G1412G1409_22-2.2845.52-2.966-9.681-4.27139.5057.4824.246-2.907-6.18614.01940.842
143922_A1391U1392:A1406U1407_22-0.966-1.7473.5293.4394.73436.334-3.4342.0133.1837.531-5.47136.787
135522_A1469C1470:G1574G1170_22-0.3630.3343.133-2.0763.67829.234-0.1020.2843.1687.2394.08529.531
144422_A1471C1472:G1536U1538_221.891-2.8553.385-1.7659.964-75.731.991.4743.717-8.082-1.431-76.303
144722_A1475C1476:G1531U1532_220.495-1.0863.1431.9489.16242.176-2.315-0.4952.87612.546-2.66843.158
145122_A1479G1480:C1527U1528_22-1.013-2.0963.8853.53915.02225.279-7.3022.7382.16630.922-7.28429.552
145322_A1487G1488:C1518U1519_220.491-1.5492.059-22.68-12.00220.498-1.335-3.5431.526-24.32245.96332.734
136822_A1569A1570:G1541G1542_22-0.0820.0012.735-6.0998.55229.317-1.373-0.8282.59716.25411.59131.103
136922_A1570C1571:G1540G1541_220.865-0.6313.447-7.2835.66866.817-0.795-1.0713.2925.1226.58167.378
133722_A1576A1577:U1168G1169_221.522-1.4184.0682.749.05455.11-2.151-1.4323.8769.705-2.93755.853
133822_A1577U1578:G1167U1168_220.158-1.1862.9920.7663.88646.137-1.806-0.1422.8914.948-0.97546.298
145922_A1586A1587:U1609G1610_220.018-0.5892.804-6.868-1.92160.798-0.501-0.2982.803-1.8916.76161.175
146022_A1587G1588:U1608U1609_22-0.136-1.8784.1044.29416.00134.982-5.090.8092.96324.963-6.69938.595
146522_A1592A1593:U1603U1604_220.382-0.7623.4820.014.06644.646-1.389-0.53.4035.339-0.01344.821
146622_A1593G1594:C1602U1603_22-0.837-1.7563.12-2.188.39527.549-5.1821.2482.54217.0994.4428.856
148522_A1655U1656:A1744G1745_221.825-0.4513.404-1.32919.68261.344-1.291-1.7773.11118.7791.26864.143
148822_A1659A1660:U1741U1742_22-0.777-2.0513.1895.441-1.31531.594-3.4832.3543.096-2.393-9.89632.073
148922_A1660U1661:A1740U1741_22-0.511-1.6123.063-6.0737.02224.894-5.159-0.3132.57115.61213.50226.543
149622_A1667G1668:C1733U1734_220.494-1.4183.3062.85214.33530.257-4.641-0.4222.44125.666-5.10633.528
150022_A1671G1672:C1729A1730_22-0.296-0.7333.069-0.426-2.05357.044-0.6610.2883.094-2.1490.44657.079
150722_A1678G1679:A1722U1723_22-1.951-1.2663.2745.1320.35956.348-1.3552.3393.0920.379-5.42256.563
151022_A1681U1682:A1719G1720_22-2.52-1.611-0.81286.936-133.112167.76-0.8411.237-0.81-66.605-43.5177.772
147022_A1749A1750:U1650A1651_22-0.801-1.983.3475.0056.16717.496-8.7154.6552.21419.049-15.4619.201
147122_A1750C1751:G1649U1650_220.762-1.4342.9761.14.54732.66-3.209-1.1772.788.033-1.94332.985
147422_A1753A1754:C1646U1647_22-1.131-2.7581.323-150.18286.557-131.7161.236-0.8151.37-43.424-75.343-177.277
147522_A1754A1756:G1645C1646_22-3.341-2.3612.22390.064-102.726171.848-1.1261.7192.189-51.401-45.065176.989
147622_A1756G1757:C1644G1645_220.232-2.2263.316-5.90129.53836.738-4.705-0.6741.23839.7087.93347.176
148122_A1762A1763:C1639C1640_22-1.566-0.8423.451-5.6331.91449.55-1.1481.4163.5652.2746.69349.884
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1324555_U3237G3238:C3249U3250_55-0.157-1.5523.5896.4557.56536.167-3.4561.1313.13911.911-10.16337.466
1325155_U3297C3298:G3390A3391_550.1-2.3594.161-6.45213.45534.018-5.773-1.1472.98221.74710.42737.058
1325455_U3300U3301:U3313A3314_550.783-1.1913.8050.24113.31247.471-2.549-0.923.37916.167-0.29349.198
1325555_U3301U3302:U3312U3313_55-0.736-2.8343.197-2.4118.73814.085-10.5291.344-0.24853.1736.83923.527
1325655_U3302G3303:C3311U3312_55-0.174-0.6642.8833.14111.64631.927-2.7010.722.46920.29-5.47334.074
1326855_U3329A3330:U3373U3374_550.262-1.0522.91-3.9767.94440.459-2.217-0.7352.6311.3235.66641.383
1327055_U3331U3332:G3371A3372_55-0.088-1.0222.6253.9074.56434.836-2.210.5962.4517.553-6.46635.335
1327155_U3332G3333:A3370G3371_551.0490.362.888-1.6249.22958.555-0.053-1.1342.8839.371.64959.234
1328155_U3346A3347:U3358A3359_55-0.023-1.6173.2074.27710.47628.432-4.9310.8042.44320.339-8.30330.558
154044_A33C32:G331G330_110.4091.704-3.398-8.809-15.383-37.507-3.9541.461-2.39922.455-12.858-41.348
1163644_A40A41:G103A105_44-0.26-0.1682.9810.577-3.986121.309-0.0630.1542.983-2.286-0.331121.349
1163744_A41G42:U102G103_440.95-0.6493.758-9.47412.47757.315-1.363-1.4983.38212.7489.67959.242
1163944_A43A44:U100U101_44-0.616-1.7533.81812.0943.49439.295-2.9152.3423.3335.041-17.44941.186
1164044_A44C45:G58U100_440.705-1.1362.991-5.916-0.28940.64-1.592-1.5852.872-0.4138.46341.052
1164744_A65A66:U93C94_440.023-0.8913.6940.8857.43556.475-1.3920.033.567.819-0.9356.929
1164844_A66U67:A92U93_44-0.738-1.4973.319-4.9243.41333.277-3.1310.4663.2275.9018.51233.797
154544_C28U27:A336G335_110.6912.076-3.246-3.532-3.751-31.686-4.3921.849-2.8966.813-6.415-32.091
154344_C30U29:A334G333_110.6842.32-3.44.67-9.201-27.454-6.4680.398-2.58318.5769.428-29.294
154144_C32G31:C332G331_11-0.3032.002-2.9313.9-3.575-30.057-4.412-1.239-2.6226.8277.447-30.508
1164144_C45G46:C57G58_441.037-1.8163.2975.3818.60627.471-5.381-0.9392.76317.388-10.87229.252
1164344_C47C62:U55G56_44-1.159-2.4043.3149.838.16450.947-3.2211.9132.6759.324-11.22652.421
1165444_C115G116:C137G107_44-1.696-3.9252.879-4.785-1.9922.81-22.696-20.6624.075-23.65656.8265.895
1165644_C117C118:G135G136_44-0.667-2.493.1223.2621.48922.794-6.7022.7122.8333.738-8.18823.071
1165744_C118C119:G134G135_44-0.221-1.7543.615-3.69711.79935.243-4.349-0.1572.90718.7885.88637.284
1165844_C119C120:G133G134_44-0.111-2.0333.1673.88310.46632.06-4.9540.7342.37718.272-6.77933.899
1165944_C120U121:G132G133_440.323-1.8193.217-0.4075.62436.359-3.604-0.5642.918.9470.64736.78
154244_G31C30:G333C332_110.241.904-3.541-2.173-12.941-31.023-5.3450.759-2.54422.95-3.854-33.621
1163844_G42A43:U101U102_44-0.483-2.482.691-12.9792.06129.608-4.756-1.0412.5043.80523.96632.334
1164244_G46C47:G56C57_44-0.6-1.3613.242-7.0685.04737.436-2.6880.0463.0987.73610.83438.395
1164444_G49C50:G75C76_440.32-1.5523.2721.7236.22239.652-2.946-0.2763.0159.098-2.5240.154
1164544_G63U64:A96A97_44-0.173-2.9683.681-13.9378.66930.909-6.296-1.8782.61915.01324.13534.903
1165044_G68U69:A89C91_441.005-1.2883.1730.1852.31535.085-2.463-1.6383.093.836-0.30635.159
1165244_G70A71:G87A88_440.426-1.8754.84.56-1.21-3.50127.04337.1042.14413.71251.653-5.874
1165344_G114C115:G107C108_44-0.491-2.3493.2940.5613.28434.968-4.3710.8953.065.45-0.9335.121
1165544_G116C117:G136C137_440.895-1.6153.3090.1011.55442.052-2.411-1.2363.2522.165-0.1442.08
1166244_G123G124:C129C130_440.696-1.8592.9776.6921.39230.538-3.691-0.1252.9732.602-12.50831.276
154741_U26C339:G25G337_410.0543.348-0.472-156.34478.61-132.925-1.6050.165-1.014-39.398-78.358-178.001
154644_U27U26:G337A336_11-0.3491.61-2.6571.839-5.437-26.709-4.44-1.087-2.26211.63.923-27.308
154444_U29C28:G335A334_11-0.7891.579-3.1650.129-2.133-30.586-3.385-1.516-3.0474.0370.243-30.659
1164644_U64A65:C94A96_443.514-2.262.51-15.131-3.18928.898-3.712-7.6750.849-5.88927.93732.698
1164944_U67G68:C91A92_44-0.283-1.3183.587-0.0513.39435.567-2.6770.4533.4515.5410.08335.724
1165144_U69G70:A88A89_440.3991.1592.7071.8588.95862.6950.767-0.312.8428.561-1.77563.292
1166044_U121U122:A131G132_44-0.034-2.033.0537.97114.05225.814-6.0861.321.6728.209-16.00130.38
1166144_U122G123:C130A131_44-0.498-1.7222.991-6.0645.79727.327-4.649-0.2012.62511.9212.46828.562
1332177_A27C28:G52U53_770.704-1.3793.04110.9734.98831.499-3.1410.4592.8748.795-19.34933.672
1329877_A63G65:C15U16_77-0.055-1.7163.4541.6468.8128.975-5.0270.432.81517.1-3.19430.301
1330077_A66G67:U111U14_773.751-0.8323.4482.817-3.73358.998-0.636-3.6433.65-3.784-2.85559.167
1330677_A72C74:C105U106_770.529-1.3533.9782.1592.82455.493-1.649-0.4153.9273.029-2.31655.598
1330977_A76U78:A102A103_771.908-2.8341.308123.821128.402-31.1070.7751.5731.04-64.62862.322-178.437
1331177_A79G80:C100G101_77-0.245-1.213.481-2.87-1.13465.551-1.0670.1013.507-1.0472.64965.615
1331677_A84G85:A95U96_77-0.987-1.1282.915.330.98520.458-3.4194.5622.5162.711-14.67821.157
1329077_C6G7:U114G115_772.526-2.9353.2852.13911.27111.88-15.715-7.7620.69843.371-8.2316.501
1332077_C26A27:U53U54_772.384-1.8771.899-11.628-10.80924.852-2.438-6.0451.361-22.42824.12829.423
1332277_C28C29:G49G52_775.463-0.2242.89416.51-6.7961.170.113-4.3994.104-6.525-15.86463.478
1332377_C29G30:C47G49_770.473-2.045.963-29.05529.92648.961-4.184-2.633.59330.5629.67163.474
1332777_C36G37:U43G41_77-4.012-1.0894.05820.655-3.565-3.6336.2328.1364.40913.65579.107-21.27
1329377_C58U59:A20G21_770.292-1.7893.444-6.7778.18126.934-5.335-2.0372.64816.7613.88428.917
1330277_C68C69:G109G110_77-0.264-2.1683.082-0.9354.16229.956-4.9110.3362.7698.0011.79730.251
1330377_C69U70:A108G109_770.313-1.8513.54-5.367.43523.895-6.275-2.2162.71717.1712.37725.569
1330777_C74G75:A104C105_77-2.363-0.143.30110.6854.29757.907-0.3522.9232.8484.39-10.91758.943
1328577_G1G2:U119C120_770.297-2.1182.893-1.884-0.524.045-4.927-1.2462.905-1.1974.51224.122
1328677_G2U3:A118U119_770.365-1.6093.3663.07310.13739.601-3.383-0.1932.90414.647-4.4440.938
1328977_G5C6:G115C116_770.661-1.8653.2741.3587.87428.354-5.239-1.0312.69715.686-2.70429.436
1329177_G7G8:C113U114_77-0.663-1.2352.985-1.0945.99746.386-2.0020.7542.8277.5751.38246.763
1329277_G8C9:G112C113_770.412-0.8052.6913.8476.16930.951-2.383-0.1842.5211.364-7.08631.773
1332477_G30U31:A46C47_770.614-2.0323.4926.3567.92833.53-4.594-0.0473.01113.366-10.71534.994
1332877_G37U38:A42U43_77-1.311-1.813.3464.0163.25226.84-4.613.7362.8876.924-8.55227.324
1329577_G60G61:C18C19_770.075-1.7953.5730.5088.50936.168-3.993-0.0473.08713.476-0.80437.126
1329677_G61U62:A17C18_770.15-1.3072.9120.570.55536.392-2.161-0.172.8940.888-0.91336.4
1329977_G65A66:U14C15_77-0.793-2.233.256-5.74310.3739.291-4.240.5492.69215.0128.31440.973
1330177_G67C68:G110U111_770.264-1.5153.013-8.7499.85440.854-2.923-1.1162.49513.69412.15842.84
1330577_G71A72:U106C107_77-0.514-0.7232.873-1.6970.4737.95-1.1630.62.8840.7222.60837.989
1330877_G75A76:A103A104_772.854-1.219-1.581-88.018-148.815-155.0020.4671.512-1.45774.48-44.052-178.464
1331277_G80U81:G99C100_770.624-1.8423.3190.3723.27535.422-3.488-0.9683.1485.369-0.6135.57
1331477_G82U83:A97C98_770.971-1.8693.4326.35112.99930.711-5.238-0.6742.59723.01-11.24233.874
1331777_G85G87:C94A95_770.899-2.3543.61-1.327-0.6332.383-4.094-1.8693.615-1.1292.37832.416
1331877_G87G88:C93C94_77-0.058-2.1523.335-2.739-0.23834.595-3.571-0.3313.344-0.3994.59734.701
1331977_G88G89:A92C93_77-2.502-1.3692.705-3.714-1.95353.306-1.4162.5812.905-2.1734.13253.459
1328777_U3U4:A117A118_77-0.162-1.6183.412-7.6254.7433.305-3.48-0.9323.1198.0913.01234.461
1328877_U4G5:C116A117_77-0.64-1.642.9850.910.96733.335-4.0961.1762.32918.502-1.51835.055
1332577_U31U32:A45A46_77-0.887-1.4573.307-3.65914.93829.442-4.8880.9842.427.1816.65833.138
1332677_U32C36:G41A45_77-2.162.9452.872-6.294-7.978132.1241.6581.1432.831-4.3623.441132.324
1329477_U59G60:C19A20_77-0.027-1.6222.7270.869-0.24929.069-3.1850.2132.739-0.495-1.7329.083
1329777_U62A63:U16A17_77-0.211-1.313.059-2.00824.82526.241-4.9130.1151.3744.0673.56436.028
1330477_U70G71:C107A108_77-0.327-1.4892.9121.9163.35433.549-3.0330.8312.7325.786-3.30633.765
1331077_U78A79:G101A102_775.061-1.3393.64-2.2472.853-14.82.14116.7944.528-10.865-8.557-15.237
1331377_U81G82:C98G99_77-2.121-2.5613.071-7.9239.70718.94-9.6192.862.21826.11721.31822.678
1331577_U83A84:U96A97_770.265-1.883.5694.43418.85342.74-3.9230.0312.5824.427-5.74446.736
1222788_A33C32:G331G330_550.6521.863-3.472-5.304-18.093-23.77-6.7262.175-1.52937.307-10.937-30.255
1332988_A40A41:G103A105_88-0.117-0.0263.0792.367-6.979124.7890.040.0853.077-3.936-1.335124.913
1333088_A41G42:U102G103_881.258-0.5853.495-5.76412.14454.589-1.339-1.6783.17213.0216.1856.096
1333288_A43A44:U100U101_88-0.739-1.6243.6190.1642.31240.196-2.6451.0933.5223.36-0.23840.26
1333388_A44C45:G58U100_880.334-1.3343.043-6.407-1.58236.244-1.911-1.3392.997-2.51710.19536.82
1334088_A65A66:U93C94_88-0.694-0.7063.8351.9651.20648.795-0.961.0133.7881.459-2.37748.846
1334188_A66U67:A92U93_88-0.253-1.3593.531-8.6126.05239.918-2.622-0.6253.2838.68412.35641.227
1223288_C28U27:A336G335_551.0692.471-3.4068.079-7.79-23.7-7.5230.213-2.68717.74718.408-26.189
1223088_C30U29:A334G333_550.8032.439-3.64.282-10.572-20.1-9.5950.589-2.18227.60411.18-23.082
1222888_C32G31:C332G331_55-0.2451.611-2.912-0.295-3.478-34.555-3.16-0.372-2.7445.836-0.495-34.726
1333488_C45G46:C57G58_881.201-1.8672.8051.7464.48129.945-4.317-2.0062.5698.603-3.35230.32
1333688_C47C62:U55G56_88-0.724-2.3763.36412.15416.81548.587-3.671.532.25419.441-14.05252.583
1334788_C115G116:C137G107_88-1.807-3.7933.154-0.333-0.3373.284-59.46425.2513.689-5.8455.7653.318
1334988_C117C118:G135G136_88-1.013-2.3182.9290.513.72625.358-6.1122.4062.5478.429-1.15325.631
1335088_C118C119:G134G135_88-0.527-2.033.1544.3529.94630.434-5.1711.6132.29918.232-7.97732.269
1335188_C119C120:G133G134_88-0.055-1.893.549-2.8547.35734.087-4.286-0.3513.08112.3464.78834.962
1335288_C120U121:G132G133_88-0.042-2.3333.0945.48512.07733.292-5.2380.7222.11420.114-9.13535.767
1222988_G31C30:G333C332_55-0.0541.747-3.7021.906-12.628-34.342-4.598-0.36-2.89520.5283.098-36.573
1333188_G42A43:U101U102_88-0.658-2.3133.307-8.56611.15733.823-5.119-0.052.53218.22913.99636.552
1333588_G46C47:G56C57_88-0.307-1.4583.2731.175-3.63734.569-1.8730.6973.392-6.097-1.9734.773
1333788_G49C50:G75C76_880.288-1.4353.0295.325.67429.31-3.7680.4092.71910.971-10.28630.302
1333888_G63U64:A96A97_88-0.653-2.5483.782-10.1846.78336.007-4.884-0.4483.32310.60215.9237.964
1334388_G68U69:A89C91_880.901-1.4383.013-0.534-0.832.463-2.441-1.6983.032-1.430.95532.477
1334588_G70A71:G87A88_880.348-1.9614.6261.135-5.414-5.65333.1466.491.91743.4659.115-7.908
1334688_G114C115:G107C108_88-0.527-2.3873.2051.1254.22637.695-4.1790.9452.9146.513-1.73437.938
1334888_G116C117:G136C137_880.878-1.6593.179-3.3180.34140.633-2.418-1.6113.0880.494.76840.764
1335588_G123G124:C129C130_88-0.36-1.9323.7329.27713.8734.413-4.7551.7532.61321.919-14.66138.135
1223485_U26C339:G25G337_85-0.325-3.235-1.052156.732-78.529170.843-1.6360.127-0.956-39.268-78.373179.625
1223388_U27U26:G337A336_55-0.3751.454-2.687-2.6-8.424-29.971-3.931-0.318-2.22915.862-4.895-31.212
1223188_U29C28:G335A334_55-0.3981.556-2.766-5.2783.171-37.544-2.035-0.025-2.911-4.886-8.133-38.027
1333988_U64A65:C94A96_883.917-2.3772.571-17.5333.77929.136-4.305-7.853-0.0236.76431.38434.112
1334288_U67G68:C91A92_88-0.692-1.2923.2114.1022.29740.439-2.1011.4313.0543.309-5.9140.7
1334488_U69G70:A88A89_880.3220.8812.6694.47117.24355.1720.114-0.1262.82418.098-4.69357.76
1335388_U121U122:A131G132_880.726-1.9212.7945.9898.67723.573-6.197-0.322.08620.007-13.80925.794
1335488_U122G123:C130A131_88-0.406-1.3693.178-5.9257.96827.943-4.243-0.3682.72115.87911.80729.621

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.