A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Sep-2022 number of released structures: 12282
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NDB ID: 4U6F  PDB ID: 4U6F 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A39A40:G467C469_222.369-2.4033.716-8.011-1.426-1.10323.312-20.1442.39414.424-81.016-8.212
14122_A40A41:U466G467_220.155-0.4213.615-4.4977.57760.059-0.82-0.3923.5257.5264.46760.642
14222_A41A438:G465U466_220.2850.2723.689-0.6943.57279.2840.104-0.2443.6942.7980.54379.354
16322_A67G69:U82G83_221.027-0.2933.774-0.974.38357.385-0.577-1.1273.7284.5571.00957.545
16522_A93A399:U395G396_22-1.8270.0472.984-4.2286.434-2.626-12.812-21.082-0.022-59.496-39.099-8.134
18322_A103C309:G357U358_221.184-2.0213.213-8.0942.58491.937-1.449-0.973.081.7945.6292.241
18222_A105A103:U358C308_223.628-4.962-2.22642.44197.30822.988-0.523-3.354-3.55174.69-32.576107.878
19022_A108G109:C305U306_220.248-0.973.078-2.70813.10532.846-3.305-0.7622.49422.0694.5635.397
19422_A112U113:A301U302_22-1.313-1.4592.821-3.69911.6222.911-5.7952.1192.03826.9428.57725.916
110322_A124U125:G291U293_222.834-1.1824.036-4.5216.00149.875-2.55-3.5523.28718.3955.19752.404
110822_A147A148:C166U167_220.912-1.7513.5621.67913.22545.078-3.321-1.0042.99316.82-2.13546.909
110922_A148C149:G165C166_223.611-2.7683.828-8.0221.68545.393-4.634-4.7371.78926.1959.68850.663
110422_A171C172:G143U144_222.199-1.493.282-4.3768.45232.239-3.831-4.4552.5114.8227.67533.578
110622_A173U174:A266G142_22-2.341-2.6333.2440.957-5.42378.018-1.9351.8833.368-4.303-0.75978.181
111522_A182U183:A202U203_22-0.59-1.0982.823-5.5836.2622.901-4.252-0.0742.5115.13113.49424.37
112022_A188C189:G196A197_220.362-0.8523.511-3.524-3.37959.61-0.673-0.5523.525-3.3933.53959.791
112522_A206U207:C258U259_220.689-1.6333.598-4.04214.80936.725-4.132-1.4862.68222.3446.09939.702
112922_A210U211:A254U255_220.526-1.8983.5292.9471.4232.32-3.661-0.3863.4782.543-5.27732.48
113222_A213G214:A251U252_22-0.6-1.42.9760.81516.91362.517-1.9290.5922.55615.988-0.7764.545
113522_A236C237:G228U229_220.787-1.0093.414-8.94212.63845.806-2.212-1.6542.86415.71711.12148.217
114722_A265U267:A288U289_22-1.535-0.8692.8891.5082.32848.469-1.2131.9682.8012.833-1.83548.544
18822_A312A315:A352A353_224.904-0.8613.0145.536-20.9997.5598.124-9.5982.962-68.687-18.10722.98
115622_A316C317:G347U348_220.135-2.0563.2630.22.0927.937-4.728-0.2343.1054.321-0.41428.014
115922_A323U324:A344U345_22-1.093-1.2323.145-6.47217.19135.485-3.6270.9212.47126.1579.84739.821
116422_A328G329:C339U340_220.309-1.7173.3556.6316.630.284-4.3450.6362.92612.27-12.32831.664
116722_A366A367:U374U375_22-0.497-1.333.119-1.0535.91736.626-2.8220.6512.899.3391.66237.099
116822_A367U368:G373U374_22-0.192-1.3962.9310.2295.54638.218-2.7040.3152.7088.415-0.34838.604
16622_A399A401:C394U395_22-0.355-1.3913.189-7.254-2.31433.743-1.983-0.5243.277-3.92412.30234.567
16722_A401G404:C393C394_223.573-1.243.4240.049-2.44679.258-0.902-2.7993.457-1.917-0.03879.29
17122_A407C408:G389G390_22-1.1471.0663.0640.0687.902-15.03-8.012-3.8472.227-27.8370.241-16.97
17422_A410C411:G422G423_221.513-1.2692.824-6.368.04424.624-4.331-4.5291.88117.90214.15426.643
14322_A438U439:A464G465_22-3.364-3.7412.92519.9230.7624.808-10.5279.91-2.7162.929-76.52120.504
14522_A441C442:G462U463_22-0.676-2.2683.0380.2284.53436.123-4.191.112.7387.277-0.36636.398
16122_A452G63:C87U88_22-3.043-1.9362.8551.0434.69450.435-2.5413.6192.6175.494-1.22150.649
1122_A468G595:C31U32_221.641-2.8883.517-2.45913.94280.856-2.558-1.3153.03310.6751.88381.876
117222_A477A478:G510A511_22-1.114-2.4963.421-7.6142.50621.088-7.36-0.1143.36.55119.922.544
117322_A478C479:G509G510_220.255-1.4692.578-0.632-4.13327.358-2.25-0.662.759-8.6751.32627.669
117522_A483A485:U502U504_220.687-3.76.487-10.5911.86759.575-3.853-1.696.1891.86310.56560.45
117622_A485G486:U501U502_221.56-2.114.59415.44911.4923.563-7.3061.4233.57923.702-31.86930.343
117922_A515G516:C536G537_220.792-0.1973.98-6.02213.70762.441-0.898-1.063.78713.0235.72264.034
118022_A518A520:U532U533_22-1.979-1.3663.6056.23931.12644.399-3.3492.5462.03336.243-7.26454.109
118122_A520U522:C531U532_22-0.286-1.415.38512.8956.77757.233-1.9991.3665.046.951-13.22758.906
118722_A550G557:C587U588_22-1.649-0.6833.1461.9054.52946.098-1.2292.2473.0035.764-2.42446.345
1622_A599U600:A26U27_220.814-1.183.0573.3320.84130.477-2.387-0.9213.0931.593-6.31330.665
1822_A601U602:G23U24_220.046-1.1263.2312.3437.86940.979-2.3710.1712.97311.105-3.30741.759
11122_A604C4:G20U21_22-3.107-0.524.9927.4930.18655.567-0.5214.7753.2690.187-27.69161.508
119722_A615G616:C1105U1106_22-0.378-1.8393.7064.17510.18634.738-4.4341.2163.00316.554-6.78536.389
119922_A622G1032:U1103U1104_220.582-3.2823.82116.54714.7254.013-12.372.96-1.03453.087-59.65822.506
126822_A746C747:G802U805_223.895-0.8453.88-37.4417.13358.513-0.98-4.6691.3456.59834.63168.899
127322_A760G761:A789U790_22-0.545-0.4773.388-3.6771.94466.555-0.5140.3453.3971.7693.34766.67
127522_A774G775:U785C786_220.989-4.9481.278129.345-110.46155.654-1.4270.7394.102-56.943-66.678171.242
127822_A814G816:A855U857_224.5340.879-0.424-116.958101.468164.2320.467-2.237-0.80150.80958.566176.576
121722_A865G866:C962U965_222.332-1.4223.4583.6513.64354.396-1.784-2.3063.5013.975-3.98454.621
122122_A869C870:G957U958_22-0.016-1.1923.553-1.84310.32651.818-2.045-0.1073.27511.6792.08452.797
123222_A881U882:U946U947_220.863-1.0842.958-7.2121.77733.379-2.089-2.4612.663.04612.36734.172
123522_A884G885:C927U928_22-0.807-0.9313.003-3.7210.3136.084-1.5360.8113.0610.4985.98736.27
123822_A887U888:A924G925_220.118-0.7353.1890.7477.14934.537-2.225-0.092.98411.881-1.24135.255
124222_A891A892:U920U921_22-0.197-1.0733.431.50310.22629.689-3.8950.6452.89719.237-2.82831.398
124322_A892U893:A919U920_220.936-1.0493.103-1.6049.97332.092-3.277-1.8542.62117.5072.81633.604
128422_A900G902:A907U909_22-1.067-1.0826.4737.2419.52294.356-1.3890.9636.15613.185-4.8996.092
128522_A933U935:G876A944_222.9450.327-0.105-73.311155.16824.610.553-1.292-0.96280.56638.064171.807
120422_A966A967:U632U633_22-1.484-2.1092.976-4.5135.1734.53-4.1761.8552.8068.6047.51135.185
120522_A967U968:G631U632_220.513-1.2783.4981.1965.13938.728-2.559-0.6173.3227.706-1.79439.072
120822_A970A971:G628U629_225.311-1.393.267-1.1910.65134.973-2.405-9.0053.0641.0831.9834.999
120922_A971G972:C627G628_220.933-0.6433.802-4.3027.25257.647-1.098-1.2193.6327.4774.43658.208
121122_A973A974:C625U626_22-0.247-1.5243.039-6.0619.01319.163-6.911-1.3142.124.67316.59322.002
121222_A974C975:G624C625_220.196-1.4853.366-1.9950.26340.555-2.17-0.513.3440.3792.87740.603
128922_A979G980:C1021C1022_22-0.161-1.4543.73-5.18410.77248.556-2.585-0.2243.35512.8736.19549.919
129322_A983G984:U1017U1018_220.182-2.2722.9976.56211.05220.517-8.0911.1481.5727.784-16.49724.174
129822_A992A993:G1011U1012_22-1.4782.5365.361-117.444-125.546-7.8890.973-2.8411.2165.522-61.293-171.934
129922_A993G994:C1010G1011_220.273-0.4433.368-2.39311.37957.971-1.044-0.4023.22511.6132.44259.027
130122_A995U996:G1008U1009_220.574-1.753.491-1.3063.86836.097-3.368-1.113.276.2172.09936.32
130422_A1036C1037:G1094U1095_220.986-2.0883.101-2.5581.99332.089-4.083-2.1932.8843.5944.61432.248
130722_A1069C1070:G1048U1049_220.506-1.5853.2462.515.23730.586-3.914-0.4842.9719.816-4.70531.119
131422_A1076C1077:G1041G1042_221.219-1.1992.9450.702-3.50225.507-1.777-2.5513.11-7.883-1.57925.752
132822_A1113U1115:A1131A1132_222.17-2.5811.403117.845130.079-93.0720.8871.4511.332-65.49459.334-176.92
133022_A1116U1117:U313G1130_22-3.25-2.0812.89-0.04610.6832.632-4.855.5072.12818.4030.07934.291
11622_A1138U8:U15G16_22-1.3560.2663.401-5.7915.01412.72-3.832-0.3673.53420.38723.54714.84
12022_A1142A1143:A11U12_220.45-1.493.4981.1823.63842.986-2.403-0.493.3774.953-1.60943.147
12122_A1143U1144:G10A11_22-0.907-2.0023.2792.0455.18727.57-5.2622.3162.78910.745-4.23728.118
12522_A1147C1148:G1629U1630_220.141-1.2373.1141.7311.91629.841-4.1250.0192.45722.043-3.20132.127
12822_A1151A1152:U1626U1627_22-1.288-1.53.19-4.4111.02337.789-2.4291.4193.2741.5726.78138.049
12922_A1152G1153:C1625U1626_22-0.253-2.123.3015.9855.17229.002-5.0961.6532.78310.093-11.67830.039
13422_A1157A1160:U1617U1621_224.888-0.2983.657-7.534-14.099116.468-0.016-2.9483.469-8.2714.42117.156
13522_A1160C1161:G1616U1617_220.025-1.5173.59-0.6062.50830.949-3.353-0.1723.4584.691.13431.053
135722_A1203A1556:U1552G1553_22-1.777-3.041-3.227163.247-56.00954.962-2.049-0.642-2.107-28.652-83.51173.425
137222_A1211G1212:C1451U1452_221.347-1.6043.6259.51611.11429.086-4.989-0.5923.10320.57-17.61232.488
137722_A1219C1220:G1263G1264_221.181-0.5163.8510.3230.00563.625-0.489-1.1043.8560.005-0.30763.625
137922_A1221C1222:G1261U1262_220.278-0.9532.558-1.0493.66828.001-2.603-0.7562.4047.5362.15628.254
138122_A1223A1224:U1259U1260_220.022-1.6473.4552.78915.83536.096-4.2420.2852.53624.137-4.2539.406
138222_A1230U1231:U1254U1257_226.8030.5932.99410.81416.41151.669-0.475-6.6254.23218.1-11.92755.04
138622_A1234G1245:U1250U1251_222.38-2.34-0.816-100.638-136.37698.709-1.34-1.068-0.315-69.20451.069173.159
138822_A1236G1237:C1248U1249_220.72-0.7433.455-0.0123.62138.19-1.604-1.0983.3735.5190.01938.354
139022_A1238U1239:C1246U1247_222.018-2.2892.86412.0997.77490.365-1.736-1.2012.8995.452-8.48591.257
139722_A1275U1276:A1436C1431_220.522-4.1453.4754.93423.188-23.4891.1222.2155.244-44.8749.549-33.254
141322_A1296G1297:A1300U1301_22-4.11-1.8373.0810.0356.25158.639-2.1614.1782.8866.363-0.03658.941
142122_A1336A1410:G1387U1415_224.134.1254.196117.09-38.54614.7183.4731.1063.214-26.905-81.73123.781
142622_A1344A1345:U1380U1381_22-0.397-0.6383.022-2.6824.28535.687-1.590.2922.9496.9494.34936.032
142722_A1345A1348:U1377U1380_221.251.6044.48114.15812.01102.7450.776-0.5084.6987.645-9.012103.939
142822_A1348G1349:C1376U1377_220.378-1.3752.562-19.52610.38521.006-4.003-3.3181.07722.06741.48930.411
143722_A1357G1358:C1365U1366_22-0.054-1.682.8981.09614.0828.191-5.1250.2571.86426.878-2.09131.466
143922_A1388C1389:G1412G1409_22-2.9675.574-3.165-11.225-7.04337.6317.3735.649-3.142-10.52716.77839.816
142222_A1410C1338:G1386G1387_222.6861.6490.559-123.643126.444100.8240.755-1.412-0.01563.4862.074177.993
135422_A1469C1470:G1574G1170_22-0.2490.5782.8150.4150.30330.0461.0610.5542.8170.584-0.830.05
144522_A1471C1472:G1536U1538_221.187-2.5533.3061.7410.579-78.5581.7010.9813.549-8.3191.369-79.169
144822_A1475C1476:G1531U1532_221.105-1.5513.0512.3123.16440.841-2.533-1.3452.9834.522-3.30441.021
145222_A1479G1480:C1527U1528_22-0.81-2.0814.12411.00719.59430.389-5.9142.7652.06132.4-18.20137.638
145422_A1487G1488:C1518U1519_220.866-1.3712.488-16.61-6.82932.556-1.476-3.0212.063-11.18427.20337.064
135822_A1556U1560:U1551U1552_223.3083.355-1.211165.4728.443-10.569-1.288-0.656-3.925-15.15288.148-167.949
136822_A1569A1570:G1541G1542_22-0.247-0.1892.708-2.2692.81925.681-1.0660.0312.6836.3015.07225.931
136922_A1570C1571:G1540G1541_220.695-0.3933.272-1.3928.40369.544-0.64-0.6553.27.3391.21569.999
133622_A1576A1577:U1168G1169_220.911-1.4373.784.20411.07958.093-2.092-0.683.5311.281-4.28159.186
133722_A1577U1578:G1167U1168_220.093-1.4693.016-0.0221.46243.1-2.13-0.1282.9671.9890.0343.124
146422_A1586A1587:U1609G1610_22-0.033-0.4072.651-4.402-3.07957.76-0.286-0.1572.664-3.1794.54657.988
146522_A1587G1588:U1608U1609_220.037-1.9213.9287.21816.43738.651-4.4790.7512.8823.362-10.25942.472
147022_A1592A1593:U1603U1604_220.518-1.033.7922.926.90446.965-1.913-0.3743.6398.598-3.63747.526
147122_A1593G1594:C1602U1603_22-0.858-1.4872.945-1.2574.52828.08-3.9281.4942.7119.2512.56728.463
148922_A1655U1656:A1744G1745_221.678-0.683.694-7.99219.07657.52-1.66-2.0723.11519.1568.02660.826
149222_A1659A1660:U1741U1742_22-0.385-2.3393.5622.5572.21928.35-5.2781.3963.3264.51-5.19828.548
149322_A1660U1661:A1740U1741_22-0.311-1.2153.052-1.7023.60330.925-2.8880.2832.9086.7213.17531.174
150022_A1667G1668:C1733U1734_220.487-1.5613.7034.89215.55325.559-6.2080.0782.42831.41-9.87930.243
150422_A1671G1672:C1729A1730_220.274-0.8423.075-3.9762.43253.123-1.082-0.543.0112.7134.43653.312
151122_A1678G1679:A1722U1723_22-1.922-1.1793.39-1.0544.05561.047-1.3571.8373.3433.9861.03661.177
151422_A1681U1682:A1719G1720_22-1.916-2.361-1.33392.594-132.2141.683-1.3410.848-0.99-66.515-46.588173.92
151922_A1689G1690:C1711A1712_22-0.27-1.5493.398-5.95916.859-40.1170.256-1.0063.664-23.232-8.212-43.771
147422_A1749A1750:U1650A1651_22-0.97-2.0573.231-0.5257.71522.789-7.1462.1782.43418.8421.28324.049
147522_A1750C1751:G1649U1650_221.1-1.5193.06-0.0253.19532.638-3.192-1.9532.9015.6690.04432.789
147822_A1753A1754:C1646U1647_22-0.423-3.626-0.418-155.15884.49537.504-1.4980.791-1.42542.78778.57176.85
147922_A1754A1756:G1645C1646_22-3.166-1.8772.78985.229-107.908174.162-0.8871.6242.763-53.974-42.63177.885
148022_A1756G1757:C1644G1645_22-0.564-2.053.33-4.7424.22635.531-4.8390.3681.71434.9836.84443.036
148522_A1762A1763:C1639C1640_22-1.111-0.913.45-6.058-5.34248.469-0.6570.843.631-6.4547.3249.098
148622_A1763C1764:G1638C1639_22-0.984-1.2453.4381.0984.08343.196-2.0931.443.2885.531-1.48743.393
152722_A1776G1777:C1784U1785_22-0.465-0.8822.92-1.0275.24933.424-2.2570.6542.7669.0551.77133.837
11222_C4U5:A19G20_22-0.576-1.4793.467.26.60536.218-3.1711.8442.98910.394-11.3337.47
13722_C36U37:A471U472_22-0.101-2.3692.956-0.041-1.78724.734-5.0150.2233.116-4.1640.09524.797
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1318355_U2998U2999:G3149A3150_550.348-1.0973.131-1.8996.98535.801-2.643-0.7982.85311.2213.0536.502
1318455_U2999A3000:U3148G3149_550.811-2.2682.8534.9868.00322.03-7.498-0.6912.04719.815-12.34523.94
1319255_U3007A3008:U3138A3139_550.27-1.5573.1562.7527.53733.155-3.754-0.062.75912.973-4.73834.086
1319555_U3010C3099:U3135G3136_55-5.0260.3733.33317.7388.83177.9650.0824.3232.3596.916-13.8980.053
1316155_U3037U3038:A3016A3017_55-0.181-1.6353.284-0.577-0.73731.122-2.9040.2273.324-1.3741.07531.136
1316255_U3038C3039:G3015A3016_550.502-2.0993.1441.8172.4928.543-4.76-0.6292.9795.032-3.67128.705
1316555_U3041U3042:A3012U3013_550.006-1.3183.4480.922.14842.721-2.0310.0883.3812.946-1.26242.782
1316655_U3042C3043:G3098A3012_551.454-2.03.19-2.5216.23841.299-3.402-2.2792.7838.7743.54541.82
1317155_U3047U3051:A3091A3094_55-5.556-0.4334.1148.2070.656109.887-0.2743.5113.8290.4-5.008110.095
1317255_U3051G3052:U3090A3091_551.278-1.5382.799-2.1438.73826.421-4.791-3.0452.08518.454.52527.885
1317555_U3054U3055:A3086G3088_55-0.638-2.0045.909-7.16120.75669.441-2.9010.1255.25117.786.13472.412
1321655_U3064G3065:C3076A3077_550.125-1.7033.396-2.08325.53225.93-5.738-0.4461.26245.233.68936.294
1321855_U3066C3067:G3074G3075_550.674-1.8853.0226.1327.76230.99-4.56-0.2632.57114.084-11.12732.494
1319755_U3100G3101:C3133A3134_55-0.796-1.8943.6350.817-4.36632.158-2.5091.5893.832-7.836-1.46532.456
1320155_U3104A3106:G3128A3129_553.343-1.5256.0429.82325.24826.899-8.308-2.8134.1742.877-16.68237.999
1320355_U3107G3108:C3126A3127_55-0.401-1.5812.543-3.8932.83833.137-3.1020.2052.4334.9436.78233.476
1320755_U3121G3112:A3122A3123_55-0.0783.9964.014-171.255-0.602-64.344-1.996-1.7252.0880.308-87.668-172.601
1322255_U3160C3161:G3289G3290_55-0.026-1.5433.2357.88.83827.909-4.6041.5042.54117.376-15.33430.251
1323155_U3169A3170:U3280U3281_550.49-1.1044.30919.411.44726.489-2.2983.713.7372.737-36.71632.768
1323355_U3171A3174:C3278A3279_550.806-7.358-1.007-143.49220.697-39.5623.8170.2891.374-11.979-83.046-147.104
1324155_U3192C3193:G3199G3200_550.296-1.7933.0494.3746.18127.246-4.9360.2882.60212.809-9.06528.26
1324555_U3222A3223:U3262G3263_55-0.855-2.8593.5232.3754.14416.504-12.0694.2952.58414.059-8.05817.177
1325055_U3231G3232:U3255G3256_550.638-1.7552.8840.16114.88424.861-5.959-1.2521.60131.25-0.33728.916
1325555_U3236U3237:U3250U3251_55-0.236-2.1713.6220.42512.08121.537-8.550.6762.11429.522-1.03824.663
1325655_U3237G3238:C3249U3250_55-0.112-1.8543.1213.6341.66530.38-3.8170.8832.9843.16-6.89730.636
1326255_U3297C3298:G3390A3391_550.185-2.4083.9530.0038.52830.555-6.155-0.3383.18215.8-0.00631.695
1326555_U3300U3301:U3313A3314_551.024-1.3483.4562.25913.74942.751-3.022-1.1362.95618.289-3.00644.863
1326655_U3301U3302:U3312U3313_55-0.644-2.9933.167-4.45216.97415.799-10.7580.6760.1146.73612.25723.571
1326755_U3302G3303:C3311U3312_55-0.265-0.5582.8727.45712.10237.953-1.9611.0942.49517.861-11.00540.435
1327955_U3329A3330:U3373U3374_550.034-1.2243.023-4.2528.8942.807-2.388-0.4042.71311.995.73543.875
1328155_U3331U3332:G3371A3372_550.382-1.0372.77-0.3341.45737.985-1.748-0.6232.7272.2370.51438.013
1328255_U3332G3333:A3370G3371_550.9230.0232.822.19712.24655.023-0.579-0.8692.79813.069-2.34556.305
1329255_U3346A3347:U3358A3359_550.201-1.5223.5886.22814.73927.901-5.3950.7532.48327.857-11.77132.085
1132641_A2A2994:A1A2386_41-0.599-3.05-2.885171.026-12.129-44.2051.443-1.517-0.7356.25388.168-172.084
1164344_A40A41:G103A105_44-0.359-0.2632.987-5.068-1.074119.029-0.1430.1632.997-0.6232.94119.098
1164444_A41G42:U102G103_440.93-0.713.755-10.84410.45755.676-1.366-1.6173.36410.97511.3857.52
1164644_A43A44:U100U101_44-0.591-1.5913.4810.964-0.97738.305-2.2931.0293.503-1.488-1.46838.329
1164744_A44C45:G58U100_440.451-1.3582.955-0.6253.80940.651-2.317-0.7072.8155.4680.89740.827
1165444_A65A66:U93C94_44-0.139-0.8863.213-2.033-1.01247.537-1.0170.0123.233-1.2542.52147.588
1165544_A66U67:A92U93_44-0.529-1.4223.4791.5594.21440.138-2.5530.9493.2986.117-2.26340.379
1164844_C45G46:C57G58_441.23-1.8043.482.9588.6427.751-5.466-1.7952.91117.426-5.96729.187
1165044_C47C62:U55G56_44-0.984-2.3613.4287.32110.01850.675-3.3331.5922.78911.507-8.4152.074
1166144_C115G116:C137G107_44-1.236-3.7372.865-2.173-4.2216.926-11.5731.2584.561-30.63815.7738.395
1166344_C117C118:G135G136_44-0.722-2.3933.2090.02711.89421.159-8.6891.7271.64529.569-0.06824.24
1166444_C118C119:G134G135_44-0.554-1.8833.427-9.0288.35534.706-4.133-0.3612.95913.49314.57936.758
1166544_C119C120:G133G134_44-0.22-1.9472.9267.0094.2528.595-4.5481.6722.4948.389-13.83529.723
1166644_C120U121:G132G133_440.377-1.5663.5371.8578.81736.621-3.603-0.3363.10513.777-2.90237.676
1164544_G42A43:U101U102_44-0.586-2.1963.251-6.2237.16331.449-5.0430.0332.76112.85311.16632.814
1164944_G46C47:G56C57_44-0.755-1.3583.162-4.5762.737.863-2.4020.5973.1284.1357.00938.221
1165144_G49C50:G75C76_440.58-1.43.052-0.9652.03430.166-3.059-1.2912.9343.9011.8530.248
1165244_G63U64:A96A97_44-0.862-3.0143.822-16.75511.95729.21-6.808-1.2232.55920.77229.10835.605
1165744_G68U69:A89C91_440.772-1.4163.144-2.231-0.68132.095-2.439-1.7753.113-1.234.02932.178
1165944_G70A71:G87A88_440.629-1.7534.6533.186-1.572-3.66833.88135.8422.41119.51239.545-5.106
1166044_G114C115:G107C108_44-0.459-2.3913.127-2.1163.9835.366-4.4370.4682.8716.5193.46635.643
1166244_G116C117:G136C137_440.466-1.4333.3572.9661.74743.602-2.094-0.3363.3232.347-3.98643.732
1166944_G123G124:C129C130_440.426-1.7023.1392.8931.37431.56-3.355-0.2713.092.518-5.30231.718
1165344_U64A65:C94A96_443.676-2.3392.841-14.054-4.62231.14-3.459-7.7211.421-8.06424.5234.397
1165644_U67G68:C91A92_44-0.167-1.4233.7511.12410.3735.617-3.750.4273.21916.521-1.79137.066
1165844_U69G70:A88A89_440.5551.3042.7965.0610.46163.3420.827-0.3282.9889.874-4.77664.29
1166744_U121U122:A131G132_440.023-2.1423.1930.43213.45526.188-6.6020.031.88827.503-0.88229.391
1166844_U122G123:C130A131_44-0.511-1.7642.9330.64611.05429.484-4.9121.0392.13820.817-1.21631.451
1331877_A27C28:G52U53_770.367-1.2253.22911.2174.23135.311-2.4730.8943.0416.739-17.86737.229
1330977_A63G65:C15U16_77-0.121-1.9293.365-1.8679.55625.642-6.264-0.1732.49920.6094.02627.399
1331177_A66G67:U111U14_773.746-1.1013.2992.166-1.43556.397-1.08-3.8343.453-1.518-2.2956.452
1332777_A76U78:A102A103_771.727-3.0911.162122.379128.488-25.1040.8391.5381.274-64.96961.88-177.503
1332977_A79G80:C100G101_77-0.387-1.133.469-2.2952.59462.212-1.2170.2643.4352.5082.21962.298
1333477_A84G85:A95U96_77-1.3-0.8042.649-0.4220.55924.585-2.0262.9482.6521.3120.99124.595
1330177_C6G7:U114G115_771.978-2.9173.6814.48914.52311.779-14.623-4.110.52750.101-15.48719.209
1331777_C26A27:U53U54_773.184-2.0132.528-11.1931.69723.687-4.685-8.650.8193.86425.48726.219
1331977_C28C29:G49G52_775.576-0.5673.1439.755-8.62163.515-0.134-4.7613.912-8.1-9.16564.699
1332077_C29G30:C47G49_770.214-2.0585.665-24.17425.47343.523-4.621-2.5143.53129.36327.86555.383
1332477_C36G37:U43G41_77-3.904-1.2233.72220.934-1.03-2.814.2738.4534.3024.05382.349-21.145
1330477_C58U59:A20G21_770.469-1.6583.331-5.439.67235.566-3.815-1.4182.70715.3788.63437.202
1331377_C68C69:G109G110_77-0.304-2.0553.49-1.1334.24232.704-4.360.3373.2147.4922.00132.989
1331477_C69U70:A108G109_770.358-1.753.583-1.4789.27626.124-5.898-1.1042.78519.7273.14327.733
1329677_G1G2:U119C120_770.595-2.2973.0033.5666.47421.903-7.617-0.4482.30416.446-9.05923.102
1329777_G2U3:A118U119_770.225-1.3433.362-2.43111.3242.366-2.849-0.5272.91115.3233.29143.849
1330077_G5C6:G115C116_770.798-1.793.2472.4276.73131.092-4.417-1.0352.85912.353-4.45531.885
1330277_G7G8:C113U114_77-0.878-1.6213.273-2.724.63639.37-2.9160.9813.1226.8424.01539.721
1330377_G8C9:G112C113_770.698-0.8162.5944.939.33330.466-2.761-0.5772.33117.127-9.04832.202
1332177_G30U31:A46C47_770.509-1.8453.5684.899.3334.918-4.289-0.1143.03315.128-7.92936.425
1332577_G37U38:A42U43_77-1.573-2.1193.3897.8941.80523.446-5.4475.9012.5634.28-18.72524.786
1330677_G60G61:C18C19_77-0.105-1.6643.229-2.041.99437.605-2.827-0.0953.1413.0883.1637.709
1330777_G61U62:A17C18_77-0.105-1.473.2852.7084.24930.499-3.560.7083.0378.009-5.10430.903
1331077_G65A66:U14C15_77-1.09-2.1843.451-3.1148.05242.737-3.7251.1663.07910.9164.22243.561
1331277_G67C68:G110U111_770.649-1.3712.962-5.867.6837.6-2.864-1.5872.51911.6818.91338.777
1331677_G71A72:U106C107_77-0.297-0.9642.916-0.9232.73438.275-1.7680.352.8494.1621.40638.38
1332677_G75A76:A103A104_772.783-0.828-1.394-80.483-154.273-166.4350.3431.429-1.31977.155-40.251-179.292
1333077_G80U81:G99C100_770.131-2.2053.305-2.1090.47834.67-3.767-0.5433.2620.8013.53534.735
1333277_G82U83:A97C98_770.976-1.6393.4236.39611.73831.094-4.703-0.6532.78320.737-11.29933.78
1333577_G85G87:C94A95_771.232-2.4383.529-5.01-1.14227.609-4.741-3.7913.354-2.36810.38428.074
1333677_G87G88:C93C94_77-0.655-1.6963.4812.2193.42839.312-2.9271.243.2875.078-3.28739.515
1333777_G88G89:A92C93_77-3.158-1.812.656-9.854-6.62157.69-1.532.7493.28-6.78310.09558.796
1329877_U3U4:A117A118_77-0.662-1.5253.023-2.9535.10129.729-3.8390.7342.789.825.68630.295
1329977_U4G5:C116A117_77-0.671-1.4412.887-2.5399.0733.298-3.5940.8022.46415.4484.32534.568
1332277_U31U32:A45A46_77-0.76-1.6113.077-2.96110.76227.298-5.1540.9492.35421.6895.96729.451
1332377_U32C36:G41A45_77-2.0312.8913.436-2.685-11.89133.8771.651.0843.326-6.4571.458134.152
1330577_U59G60:C19A20_77-0.345-1.5122.997-1.2024.94627.852-4.0990.4612.70610.1672.47128.304
1330877_U62A63:U16A17_77-0.294-0.9962.972-0.73824.00229.043-4.1030.3781.69940.2851.23937.519
1331577_U70G71:C107A108_770.41-1.7062.9441.4413.42829.898-3.894-0.5312.7516.613-2.7830.123
1332877_U78A79:G101A102_775.167-1.2153.53-2.5012.392-13.0692.07518.7244.58-10.276-10.745-13.517
1333177_U81G82:C98G99_77-1.667-2.7862.901-6.92911.20615.796-11.4062.4531.28434.05921.05920.543
1333377_U83A84:U96A97_770.239-1.7663.9946.82428.21542.004-4.2350.2472.43734.836-8.42650.683
1333888_A40A41:G103A105_88-0.123-0.3223.051-2.183-8.195124.606-0.1170.0523.062-4.6251.232124.771
1333988_A41G42:U102G103_880.575-0.6733.297-11.2624.64561.524-0.855-1.0573.1084.49310.89562.602
1334188_A43A44:U100U101_88-0.097-1.7233.6366.3483.03639.453-2.8950.9343.4434.454-9.31340.051
1334288_A44C45:G58U100_880.247-1.2013.026-3.431.61836.581-2.105-0.8182.9372.5695.44636.77
1334988_A65A66:U93C94_88-0.494-0.593.327-8.03-1.551.735-0.5670.0143.378-1.7069.13852.333
1335088_A66U67:A92U93_88-0.448-1.453.509-3.1312.57537.992-2.5620.2653.4313.9424.79338.2
1334388_C45G46:C57G58_881.066-1.6953.205-0.8235.64631.304-4.054-2.0852.83610.3551.50931.807
1334588_C47C62:U55G56_88-0.479-2.7923.1869.7711.74442.499-4.5471.3762.22215.611-12.98745.042
1335688_C115G116:C137G107_88-1.64-3.4153.3560.890.16210.131-19.55410.8573.1450.914-5.02910.172
1335888_C117C118:G135G136_88-0.84-2.3713.145-5.5086.95123.07-7.4280.4712.46816.61213.16524.694
1335988_C118C119:G134G135_88-0.737-1.893.073-0.6970.80328.712-3.9781.3383.0371.6191.40528.732
1336088_C119C120:G133G134_880.182-2.2813.791-0.7664.9630.172-5.409-0.5133.3769.4471.45830.577
1336188_C120U121:G132G133_880.33-1.9032.9887.11213.56540.709-3.6770.1322.29418.718-9.81543.38
1334088_G42A43:U101U102_88-0.886-2.8973.213-4.2733.54929.674-6.250.8762.956.8548.25330.178
1334488_G46C47:G56C57_88-0.587-1.7153.154-1.204-2.43637.761-2.3360.7533.271-3.7581.85737.855
1334688_G49C50:G75C76_880.104-1.1093.2390.9442.86537.906-2.058-0.0423.1514.402-1.4538.022
1334788_G63U64:A96A97_88-0.834-2.8853.581-8.4035.76628.259-6.816-0.2013.06311.35316.54630.005
1335288_G68U69:A89C91_881.138-1.1222.9520.147-0.50429.977-2.074-2.1732.976-0.975-0.28429.981
1335488_G70A71:G87A88_880.712-1.8474.6211.452-5.438-5.29333.39910.5441.73545.20912.072-7.725
1335588_G114C115:G107C108_88-0.158-1.9322.948-5.0840.31438.503-2.941-0.3212.930.4737.66938.826
1335788_G116C117:G136C137_880.053-1.7653.344-3.3489.6139.373-3.57-0.4342.84113.9814.8740.616
1336488_G123G124:C129C130_880.218-1.7513.3393.9815.20432.497-4.810.1652.32725.399-6.64936.005
1334888_U64A65:C94A96_884.228-1.8443.396-15.6285.7728.662-3.894-9.2030.68310.60128.7133.064
1335188_U67G68:C91A92_88-0.11-1.3753.8052.798.19945.46-2.5390.4083.50810.496-3.57246.235
1335388_U69G70:A88A89_880.0691.2292.6692.30614.77157.5620.5950.0312.87915.062-2.35259.31
1336288_U121U122:A131G132_880.396-2.3973.0652.5812.36720.289-8.801-0.331.42431.472-6.56523.865
1336388_U122G123:C130A131_88-0.023-1.4073.2510.362.42228.686-3.3580.1243.1244.876-0.72428.789

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.