A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Nov-2020 number of released structures: 11059
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NDB ID: 4WQS  PDB ID: 4WQS 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13G_DA4:DT15_I0.115-0.097-0.249-2.3284.883.413
16G_DA7:DT12_I-0.1540.023-0.124-1.9650.365-12.722
19G_DA10:DT9_I-0.1050.01-0.094-0.4331.922-2.497
111G_DA12:DT7_I-0.01-0.276-0.029-0.835-0.335-8.625
112G_DA13:DT6_I0.141-0.385-0.033-0.779-0.066-1.37
116G_DA17:DT2_I0.1490.358-0.262-1.6573.74-39.643
121G_DA22:U12_H0.391-0.3380.0530.21-0.82416.774
12G_DC3:DG16_I-0.145-0.204-0.112.6940.845-4.462
14G_DC5:DG14_I0.071-0.116-0.0880.2981.865-9.452
17G_DC8:DG11_I0.253-0.0840.002-0.537-0.2360.422
18G_DC9:DG10_I-0.545-0.216-0.1040.5751.208-10.734
110G_DC11:DG8_I-0.053-0.073-0.082-0.632.573-6.159
114G_DC15:DG4_I-1.019-0.054-0.1511.6432.617-13.82
117G_DC18:DG1_I-0.1540.212-0.0611.7241.61-8.834
119G_DC20:G14_H0.11-0.1890.0080.0780.873.355
123G_DC24:G10_H0.136-0.3390.040.664-0.5014.826
125G_DC26:G8_H-0.097-0.0570.1130.482-2.1816.242
126G_DC27:G7_H0.091-0.1210.0820.076-1.941-1.622
113G_DG14:DC5_I0.276-0.496-0.110.4611.809-2.233
118G_DG19:C15_H0.0050.245-0.005-0.623-0.0383.726
120G_DG21:C13_H-0.157-0.4260.015-0.307-0.474-1.065
122G_DG23:C11_H-1.141-0.617-0.023-0.882-0.06815.349
124G_DG25:C9_H-0.829-0.3110.1132.165-2.7593.782
127G_DG28:C6_H0.661-0.2530.0060.90.113-11.916
11G_DT2:DA17_I0.0960.024-0.030.9940.338-20.065
15G_DT6:DA13_I0.1350.302-0.081-0.0781.311-26.683
115G_DT16:DA3_I-0.3160.44-0.0881.6610.222-30.477
130X_DA4:DT15_Z0.1420.236-0.1130.6810.958-29.011
133X_DA7:DT12_Z-0.0590.01-0.122-2.1861.617-28.457
136X_DA10:DT9_Z-0.199-0.006-0.0880.3792.336-10.621
138X_DA12:DT7_Z0.121-0.64-0.043-3.1570.5653.399
139X_DA13:DT6_Z0.275-0.5320.0210.174-0.98.942
143X_DA17:DT2_Z0.5340.079-0.060.790.874-22.729
148X_DA22:U12_Y0.006-0.3480.038-1.673-2.18814.283
129X_DC3:DG16_Z-0.096-0.217-0.0240.373-0.366-14.19
131X_DC5:DG14_Z0.4320.047-0.0690.7441.222-8.467
134X_DC8:DG11_Z0.203-0.456-0.0680.681.463-8.526
135X_DC9:DG10_Z-0.11-0.206-0.0581.0750.572-9.172
137X_DC11:DG8_Z0.4110.0-0.070.3311.6882.838
141X_DC15:DG4_Z-0.025-0.124-0.040.9340.548-8.556
144X_DC18:DG1_Z-0.29-0.124-0.0882.0343.123-6.466
146X_DC20:G14_Y0.624-0.032-0.0540.1651.391-4.136
150X_DC24:G10_Y-0.084-0.4240.0372.961-0.8452.678
152X_DC26:G8_Y0.481-0.5090.1590.84-4.5155.246
153X_DC27:G7_Y-0.129-0.2270.214-1.045-4.467-0.918
140X_DG14:DC5_Z-0.006-0.221-0.1030.64-0.5473.159
145X_DG19:C15_Y0.0290.39-0.091-1.3262.1929.64
147X_DG21:C13_Y0.325-0.148-0.0021.086-0.6057.033
149X_DG23:C11_Y-1.12-0.6420.0751.135-3.1228.862
151X_DG25:C9_Y-0.575-0.1870.1071.208-2.223.763
154X_DG28:C6_Y0.241-0.1870.0320.861-0.569-10.485
128X_DT2:DA17_Z-0.2110.179-0.0671.1911.081-18.539
132X_DT6:DA13_Z-0.1710.2490.032-0.387-0.859-6.924
142X_DT16:DA3_Z-0.258-0.014-0.034-0.097-0.247-16.404

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.