A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 1-Dec-2021 number of released structures: 11785
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NDB ID: 4X0G  PDB ID: 4X0G 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15E_DA6:DT9_F0.237-0.1340.081-2.701-2.9772.066
16E_DA7:DT8_F-0.001-0.3810.092-1.615-12.783-0.608
111E_DA12:DT3_F0.115-0.1890.6819.004-26.754-5.61
112E_DA13:DT2_F0.2480.1490.662.673-15.143.697
13E_DC4:DG11_F0.041-0.1980.361-20.371-12.987-6.743
14E_DC5:DG10_F-0.635-0.1380.599-21.0920.414-0.686
19E_DG10:DC5_F0.429-0.0430.80623.832-1.879-1.881
110E_DG11:DC4_F-0.044-0.4180.5421.814-20.343-12.316
11E_DT2:DA13_F-0.3270.2291.034-10.461-14.7590.774
12E_DT3:DA12_F0.012-0.3630.582-8.33-26.385-6.775
17E_DT8:DA7_F0.301-0.279-0.024-2.01-16.7032.114
18E_DT9:DA6_F-0.796-0.28-0.0055.076-4.68-5.081
118H_DA6:DT9_G0.302-0.367-0.071-6.127-3.011.596
119H_DA7:DT8_G-0.069-0.1510.171-0.148-11.2154.045
124H_DA12:DT3_G0.41-0.1820.3465.117-30.206-5.624
125H_DA13:DT2_G0.478-0.1611.1787.792-17.9611.252
116H_DC4:DG11_G-0.014-0.1510.54-21.721-18.487-6.71
117H_DC5:DG10_G-0.465-0.1470.361-16.154-2.6171.497
113H_DG1:DG1_F-1.9111.9971.1355.211-6.192-38.855
122H_DG10:DC5_G0.142-0.2310.75124.8491.402-7.304
123H_DG11:DC4_G0.425-0.3520.65822.22-18.805-7.79
114H_DT2:DA13_G-0.0260.0931.171-6.925-13.102-2.29
115H_DT3:DA12_G0.326-0.4480.734-6.11-23.974-7.933
120H_DT8:DA7_G0.192-0.429-0.121-0.58-17.2911.894
121H_DT9:DA6_G-0.439-0.3260.0613.874-5.303-2.1

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.