A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 4ZM0  PDB ID: 4ZM0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17E_DA9:DT7_F-0.041-0.0940.2092.745-0.3741.099
19E_DA11:DT5_F-0.088-0.0860.0731.549-1.9761.815
111E_DA13:DT3_F-0.0930.0160.158-0.729-6.0844.692
18E_DC10:DG6_F0.6310.1090.2213.119-10.4178.531
110E_DC12:DG4_F0.1180.0060.1594.412-3.924.278
13E_DG5:DC11_F-0.153-0.080.113-4.227-3.1853.683
15E_DG7:DC9_F-0.7790.060.256-1.517-12.4968.319
11E_DT3:DA13_F-0.025-0.0050.168-1.16-1.4444.439
12E_DT4:DA12_F-0.035-0.0320.1043.122-3.6884.966
14E_DT6:DA10_F0.125-0.0970.099-2.409-1.0922.266
16E_DT8:DA8_F0.145-0.1150.218-5.073-1.8361.028
112E_DT14:DA2_F-0.0740.0520.134-0.122-6.6915.543
121G_DA9:DT7_H-0.125-0.080.23.783-0.3591.06
123G_DA11:DT5_H-0.127-0.110.1222.578-0.732.838
125G_DA13:DT3_H-0.013-0.0370.053-2.43-5.7497.977
114G_DC2:DG14_H0.197-0.0350.192-0.66-9.2841.293
122G_DC10:DG6_H0.5630.0940.1864.082-10.128.333
124G_DC12:DG4_H0.171-0.0530.1445.169-2.9176.455
113G_DG1:DC1_F0.152-0.116-0.3330.55115.764-3.666
117G_DG5:DC11_H-0.088-0.0170.077-4.428-4.5072.985
119G_DG7:DC9_H-0.8560.1090.274-1.03-13.6788.73
115G_DT3:DA13_H0.0920.050.157-1.775-6.5053.967
116G_DT4:DA12_H0.080.0530.052.229-4.8094.12
118G_DT6:DA10_H0.113-0.0620.069-2.149-2.3651.956
120G_DT8:DA8_H0.063-0.0690.238-4.115-2.5871.504
126G_DT14:DA2_H0.1020.0490.019-1.812-4.3649.84

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.