A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 4ZTF  PDB ID: 4ZTF 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14C_DA7:DT13_D-0.078-0.181-0.0070.435-15.674-1.585
18C_DA11:DT9_D0.036-0.294-0.0894.079-19.9052.194
19C_DA12:DT8_D0.236-0.1420.239-0.644-13.8754.511
116C_DA19:DT1_D0.8-0.084-0.402-1.466-13.48420.279
13C_DC6:DG14_D0.065-0.172-0.1180.2352.176-0.418
113C_DC16:DG4_D0.151-0.132-0.057-9.386-12.457-0.044
115C_DC18:DG2_D0.229-0.189-0.036.353-3.5730.583
11C_DG4:DC16_D-0.193-0.004-0.679-29.491-15.1991.474
16C_DG9:DC11_D-0.256-0.1710.169.9944.572-2.337
17C_DG10:DC10_D-0.461-0.1830.13314.367-9.2570.169
114C_DG17:DC3_D-0.277-0.30.152-1.054-10.383-1.026
12C_DT5:DA15_D0.045-0.169-0.039-16.688-4.3713.129
15C_DT8:DA12_D0.053-0.1550.102-6.594-16.1375.946
110C_DT13:DA7_D0.139-0.1790.25-3.343-15.7213.112
111C_DT14:DA6_D-0.196-0.262-0.036-4.649-18.1532.277
112C_DT15:DA5_D-0.241-0.207-0.175-5.423-15.585-0.358

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.