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As of 28-Sep-2022 number of released structures: 12311
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NDB ID: NA2191  PDB ID: 4B3P 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
4B3P|1|R|A|154B3P|1|R|A|150BPh
4B3P|1|R|A|154B3P|1|R|A|16s35
4B3P|1|R|A|154B3P|1|R|U|14s53
4B3P|1|R|A|164B3P|1|R|A|15s53
4B3P|1|R|A|164B3P|1|R|A|160BPh
4B3P|1|R|A|164B3P|1|R|C|17s35
4B3P|1|R|A|194B3P|1|R|A|190BPh
4B3P|1|R|A|194B3P|1|R|U|18s53
4B3P|1|R|A|194B3P|1|R|U|20s35
4B3P|1|R|A|214B3P|1|R|A|210BPh
4B3P|1|R|A|214B3P|1|R|G|22s35
4B3P|1|R|A|214B3P|1|R|U|20s53
4B3P|1|R|A|254B3P|1|R|A|250BPh
4B3P|1|R|A|254B3P|1|R|C|24s53
4B3P|1|R|A|254B3P|1|R|U|26s35
4B3P|1|R|A|274B3P|1|R|A|270BPh
4B3P|1|R|A|274B3P|1|R|C|28s35
4B3P|1|R|A|274B3P|1|R|U|26s53
4B3P|1|R|A|304B3P|1|R|A|300BPh
4B3P|1|R|A|304B3P|1|R|C|31s35
4B3P|1|R|A|304B3P|1|R|G|29s53
4B3P|1|R|A|334B3P|1|R|A|330BPh
4B3P|1|R|A|334B3P|1|R|C|32s53
4B3P|1|R|A|334B3P|1|R|C|34s35
4B3P|1|R|C|174B3P|1|R|A|16s53
4B3P|1|R|C|174B3P|1|R|C|170BPh
4B3P|1|R|C|174B3P|1|R|U|18s35
4B3P|1|R|C|244B3P|1|R|A|25s35
4B3P|1|R|C|244B3P|1|R|C|240BPh
4B3P|1|R|C|244B3P|1|R|G|23s53
4B3P|1|R|C|284B3P|1|R|A|27s53
4B3P|1|R|C|284B3P|1|R|C|280BPh
4B3P|1|R|C|284B3P|1|R|G|29s35
4B3P|1|R|C|314B3P|1|R|A|30s53
4B3P|1|R|C|314B3P|1|R|C|310BPh
4B3P|1|R|C|314B3P|1|R|C|32s35
4B3P|1|R|C|324B3P|1|R|A|33s35
4B3P|1|R|C|324B3P|1|R|C|31s53
4B3P|1|R|C|324B3P|1|R|C|320BPh
4B3P|1|R|C|344B3P|1|R|A|33s53
4B3P|1|R|C|344B3P|1|R|C|340BPh
4B3P|1|R|G|224B3P|1|R|A|21s53
4B3P|1|R|G|224B3P|1|R|G|23s35
4B3P|1|R|G|234B3P|1|R|C|24s35
4B3P|1|R|G|234B3P|1|R|G|22s53
4B3P|1|R|G|234B3P|1|R|G|230BPh
4B3P|1|R|G|294B3P|1|R|A|30s35
4B3P|1|R|G|294B3P|1|R|C|28s53
4B3P|1|R|G|294B3P|1|R|G|290BPh
4B3P|1|R|U|144B3P|1|R|A|15s35
4B3P|1|R|U|144B3P|1|R|U|140BPh
4B3P|1|R|U|184B3P|1|R|A|19s35
4B3P|1|R|U|184B3P|1|R|C|17s53
4B3P|1|R|U|184B3P|1|R|U|180BPh
4B3P|1|R|U|204B3P|1|R|A|19s53
4B3P|1|R|U|204B3P|1|R|A|21s35
4B3P|1|R|U|204B3P|1|R|U|200BPh
4B3P|1|R|U|264B3P|1|R|A|25s53
4B3P|1|R|U|264B3P|1|R|A|27s35
4B3P|1|R|U|264B3P|1|R|U|260BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (20)Relative Frequency
0BPh201.000
Base-StackingCount (8)Relative Frequency
s5381.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)