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As of 18-Nov-2020 number of released structures: 11059
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NDB ID: 4WQS  PDB ID: 4WQS 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
4WQS|1|H|A|34WQS|1|H|C|2
4WQS|1|H|C|14WQS|1|H|C|2s35
4WQS|1|H|C|114WQS|1|H|C|110BPh
4WQS|1|H|C|114WQS|1|H|G|10s53
4WQS|1|H|C|114WQS|1|H|U|12s35
4WQS|1|H|C|134WQS|1|H|C|130BPh
4WQS|1|H|C|134WQS|1|H|G|14s35
4WQS|1|H|C|134WQS|1|H|U|12ns53
4WQS|1|H|C|154WQS|1|H|C|150BPh
4WQS|1|H|C|154WQS|1|H|G|14s53
4WQS|1|H|C|24WQS|1|H|A|3
4WQS|1|H|C|24WQS|1|H|C|1s53
4WQS|1|H|C|24WQS|1|H|C|2n0BP
4WQS|1|H|C|54WQS|1|H|C|59BPh
4WQS|1|H|C|54WQS|1|H|G|4s53
4WQS|1|H|C|64WQS|1|H|C|69BPh
4WQS|1|H|C|64WQS|1|H|G|7s35n0BP
4WQS|1|H|C|94WQS|1|H|C|90BPh
4WQS|1|H|C|94WQS|1|H|G|10s35
4WQS|1|H|C|94WQS|1|H|G|8s53
4WQS|1|H|G|104WQS|1|H|C|11s35
4WQS|1|H|G|104WQS|1|H|C|9s53
4WQS|1|H|G|104WQS|1|H|G|100BPh
4WQS|1|H|G|144WQS|1|H|C|13s53
4WQS|1|H|G|144WQS|1|H|C|15s35
4WQS|1|H|G|144WQS|1|H|G|140BPh
4WQS|1|H|G|44WQS|1|H|C|5s35n0BP
4WQS|1|H|G|44WQS|1|H|G|40BPh
4WQS|1|H|G|74WQS|1|H|C|6s53
4WQS|1|H|G|74WQS|1|H|G|70BPh
4WQS|1|H|G|74WQS|1|H|G|8s35
4WQS|1|H|G|84WQS|1|H|C|9s35
4WQS|1|H|G|84WQS|1|H|G|7s53
4WQS|1|H|G|84WQS|1|H|G|80BPh
4WQS|1|H|U|124WQS|1|H|C|11s53
4WQS|1|H|U|124WQS|1|H|C|13ns35n0BP
4WQS|1|H|U|124WQS|1|H|U|129BPh
4WQS|1|Y|A|34WQS|1|Y|A|30BPh
4WQS|1|Y|A|34WQS|1|Y|C|2s53n7BP
4WQS|1|Y|A|34WQS|1|Y|G|4ns35
4WQS|1|Y|C|14WQS|1|Y|C|1n0BP
4WQS|1|Y|C|14WQS|1|Y|C|2s35n0BP
4WQS|1|Y|C|114WQS|1|Y|C|110BPh
4WQS|1|Y|C|114WQS|1|Y|G|10s53
4WQS|1|Y|C|114WQS|1|Y|U|12s35n0BP
4WQS|1|Y|C|134WQS|1|Y|C|130BPh
4WQS|1|Y|C|134WQS|1|Y|G|14s35
4WQS|1|Y|C|134WQS|1|Y|U|12s53
4WQS|1|Y|C|154WQS|1|Y|C|150BPh
4WQS|1|Y|C|154WQS|1|Y|G|14s53
4WQS|1|Y|C|24WQS|1|Y|A|3s35
4WQS|1|Y|C|24WQS|1|Y|C|1s53
4WQS|1|Y|C|24WQS|1|Y|C|20BPh
4WQS|1|Y|C|54WQS|1|Y|C|5n9BP
4WQS|1|Y|C|54WQS|1|Y|G|4s53
4WQS|1|Y|C|64WQS|1|Y|C|69BPh
4WQS|1|Y|C|64WQS|1|Y|G|7s35n0BP
4WQS|1|Y|C|94WQS|1|Y|C|90BPh
4WQS|1|Y|C|94WQS|1|Y|G|10s35
4WQS|1|Y|C|94WQS|1|Y|G|8s53n9BP
4WQS|1|Y|G|104WQS|1|Y|C|11s35
4WQS|1|Y|G|104WQS|1|Y|C|9s53
4WQS|1|Y|G|104WQS|1|Y|G|100BPh
4WQS|1|Y|G|144WQS|1|Y|C|13s53
4WQS|1|Y|G|144WQS|1|Y|C|15s35
4WQS|1|Y|G|144WQS|1|Y|G|140BPh
4WQS|1|Y|G|44WQS|1|Y|A|3ns53
4WQS|1|Y|G|44WQS|1|Y|C|5s35
4WQS|1|Y|G|44WQS|1|Y|G|40BPh
4WQS|1|Y|G|74WQS|1|Y|C|6s53
4WQS|1|Y|G|74WQS|1|Y|G|70BPh
4WQS|1|Y|G|74WQS|1|Y|G|8s35
4WQS|1|Y|G|84WQS|1|Y|C|9s35n0BP
4WQS|1|Y|G|84WQS|1|Y|G|7s53
4WQS|1|Y|G|84WQS|1|Y|G|80BPh
4WQS|1|Y|U|124WQS|1|Y|C|11s53
4WQS|1|Y|U|124WQS|1|Y|C|13s35
4WQS|1|Y|U|124WQS|1|Y|U|120BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (25)Relative Frequency
9BPh40.160
0BPh210.840
Base-StackingCount (10)Relative Frequency
s53101.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)