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As of 31-May-2023 number of released structures: 12820
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NDB ID: 4XBF  PDB ID: 4XBF 

RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
4XBF|1|D|A|34XBF|1|D|G|4s35
4XBF|1|D|A|34XBF|1|D|U|1ns55
4XBF|1|D|A|3||||2_8654XBF|1|D|G|4||||2_865s35
4XBF|1|D|A|3||||2_8654XBF|1|D|U|1||||2_865ns55
4XBF|1|D|A|3||||3_8554XBF|1|D|G|4||||3_855s35
4XBF|1|D|A|3||||3_8554XBF|1|D|U|1||||3_855ns55
4XBF|1|D|A|3||||4_5654XBF|1|D|G|4||||4_565s35
4XBF|1|D|A|3||||4_5654XBF|1|D|U|1||||4_565ns55
4XBF|1|D|G|44XBF|1|D|A|3s53
4XBF|1|D|G|44XBF|1|D|G|40BPh
4XBF|1|D|G|4||||2_8654XBF|1|D|A|3||||2_865s53
4XBF|1|D|G|4||||2_8654XBF|1|D|G|4||||2_8650BPh
4XBF|1|D|G|4||||3_8554XBF|1|D|A|3||||3_855s53
4XBF|1|D|G|4||||3_8554XBF|1|D|G|4||||3_8550BPh
4XBF|1|D|G|4||||4_5654XBF|1|D|A|3||||4_565s53
4XBF|1|D|G|4||||4_5654XBF|1|D|G|4||||4_5650BPh
4XBF|1|D|U|14XBF|1|D|A|3ns55
4XBF|1|D|U|1||||2_8654XBF|1|D|A|3||||2_865ns55
4XBF|1|D|U|1||||3_8554XBF|1|D|A|3||||3_855ns55
4XBF|1|D|U|1||||4_5654XBF|1|D|A|3||||4_565ns55
4XBF|1|D|U|24XBF|1|D|U|20BPh
4XBF|1|D|U|2||||2_8654XBF|1|D|U|2||||2_8650BPh
4XBF|1|D|U|2||||3_8554XBF|1|D|U|2||||3_8550BPh
4XBF|1|D|U|2||||4_5654XBF|1|D|U|2||||4_5650BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (8)Relative Frequency
0BPh81.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)

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