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As of 30-Nov-2022 number of released structures: 12490
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NDB ID: 4XK0  PDB ID: 4XK0 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
4XK0|1|A|G|14XK0|1|A|G|2s35
4XK0|1|A|G|14XK0|1|C|G|-2s55
4XK0|1|A|G|14XK0|1|C|U|-3
4XK0|1|A|G|1||||2_5454XK0|1|A|G|2||||2_545s35
4XK0|1|A|G|1||||2_5454XK0|1|C|G|-2||||2_545s55
4XK0|1|A|G|1||||2_5454XK0|1|C|U|-3||||2_545
4XK0|1|A|G|24XK0|1|A|G|1s53
4XK0|1|A|G|24XK0|1|A|G|2n0BP
4XK0|1|A|G|24XK0|1|A|G|3s35
4XK0|1|A|G|2||||2_5454XK0|1|A|G|1||||2_545s53
4XK0|1|A|G|2||||2_5454XK0|1|A|G|2||||2_545n0BP
4XK0|1|A|G|2||||2_5454XK0|1|A|G|3||||2_545s35
4XK0|1|A|G|34XK0|1|A|G|2s53
4XK0|1|A|G|34XK0|1|A|G|30BPh
4XK0|1|A|G|34XK0|1|A|G|4s35
4XK0|1|A|G|3||||2_5454XK0|1|A|G|2||||2_545s53
4XK0|1|A|G|3||||2_5454XK0|1|A|G|3||||2_5450BPh
4XK0|1|A|G|3||||2_5454XK0|1|A|G|4||||2_545s35
4XK0|1|A|G|44XK0|1|A|G|3s53
4XK0|1|A|G|44XK0|1|A|G|40BPh
4XK0|1|A|G|44XK0|1|A|U|5s33
4XK0|1|A|G|4||||2_5454XK0|1|A|G|3||||2_545s53
4XK0|1|A|G|4||||2_5454XK0|1|A|G|4||||2_5450BPh
4XK0|1|A|G|4||||2_5454XK0|1|A|U|5||||2_545s33
4XK0|1|A|U|04XK0|1|A|U|00BPh
4XK0|1|A|U|04XK0|1|C|G|0n9BP
4XK0|1|A|U|0||||2_5454XK0|1|A|U|0||||2_5450BPh
4XK0|1|A|U|0||||2_5454XK0|1|C|G|0||||2_545n9BP
4XK0|1|A|U|54XK0|1|A|G|4s33
4XK0|1|A|U|54XK0|1|A|U|50BPh
4XK0|1|A|U|5||||2_5454XK0|1|A|G|4||||2_545s33
4XK0|1|A|U|5||||2_5454XK0|1|A|U|5||||2_5450BPh
4XK0|1|C|G|-14XK0|1|C|G|-10BPh
4XK0|1|C|G|-14XK0|1|C|G|-2s53
4XK0|1|C|G|-14XK0|1|C|G|0s35
4XK0|1|C|G|-1||||2_5454XK0|1|C|G|-1||||2_5450BPh
4XK0|1|C|G|-1||||2_5454XK0|1|C|G|-2||||2_545s53
4XK0|1|C|G|-1||||2_5454XK0|1|C|G|0||||2_545s35
4XK0|1|C|G|-24XK0|1|A|G|1s55
4XK0|1|C|G|-24XK0|1|C|G|-1s35
4XK0|1|C|G|-24XK0|1|C|G|-20BPh
4XK0|1|C|G|-24XK0|1|C|U|-3
4XK0|1|C|G|-2||||2_5454XK0|1|A|G|1||||2_545s55
4XK0|1|C|G|-2||||2_5454XK0|1|C|G|-1||||2_545s35
4XK0|1|C|G|-2||||2_5454XK0|1|C|G|-2||||2_5450BPh
4XK0|1|C|G|-2||||2_5454XK0|1|C|U|-3||||2_545
4XK0|1|C|G|04XK0|1|C|G|-1s53
4XK0|1|C|G|04XK0|1|C|G|00BPh
4XK0|1|C|G|04XK0|1|C|G|1s35
4XK0|1|C|G|0||||2_5454XK0|1|C|G|-1||||2_545s53
4XK0|1|C|G|0||||2_5454XK0|1|C|G|0||||2_5450BPh
4XK0|1|C|G|0||||2_5454XK0|1|C|G|1||||2_545s35
4XK0|1|C|G|14XK0|1|C|G|0s53
4XK0|1|C|G|14XK0|1|C|G|10BPh
4XK0|1|C|G|14XK0|1|C|U|2s33
4XK0|1|C|G|1||||2_5454XK0|1|C|G|0||||2_545s53
4XK0|1|C|G|1||||2_5454XK0|1|C|G|1||||2_5450BPh
4XK0|1|C|G|1||||2_5454XK0|1|C|U|2||||2_545s33
4XK0|1|C|U|-34XK0|1|C|U|-30BPh
4XK0|1|C|U|-3||||2_5454XK0|1|C|U|-3||||2_5450BPh
4XK0|1|C|U|24XK0|1|C|G|1s33
4XK0|1|C|U|24XK0|1|C|U|20BPh
4XK0|1|C|U|2||||2_5454XK0|1|C|G|1||||2_545s33
4XK0|1|C|U|2||||2_5454XK0|1|C|U|2||||2_5450BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (20)Relative Frequency
0BPh201.000
Base-StackingCount (8)Relative Frequency
s3340.500
s5320.250
s5520.250

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)