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As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 5AVB  PDB ID: 5AVB 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11I_DA-73:DT73_J120
14I_DA-70:DT70_J120
15I_DA-69:DT69_J120
17I_DA-67:DT67_J120
111I_DA-63:DT63_J120
117I_DA-57:DT57_J120
119I_DA-55:DT55_J120
121I_DA-53:DT53_J120
124I_DA-50:DT50_J120
127I_DA-47:DT47_J120
128I_DA-46:DT46_J120
129I_DA-45:DT45_J120
130I_DA-44:DT44_J120
135I_DA-39:DT39_J120
141I_DA-33:DT33_J10
142I_DA-32:DT32_J120
143I_DA-31:DT31_J00
151I_DA-23:DT23_J120
154I_DA-20:DT20_J00
155I_DA-19:DT19_J10
156I_DA-18:DT18_J120
157I_DA-17:DT17_J00
161I_DA-13:DT13_J120
167I_DA-7:DT7_J120
173I_DA-1:DT1_J120
174I_DA0:DT0_J120
178I_DA4:DT-4_J120
183I_DA9:DT-9_J120
184I_DA10:DT-10_J120
186I_DA12:DT-12_J120
196I_DA22:DT-22_J120
1100I_DA26:DT-26_J120
1103I_DA29:DT-29_J10
1110I_DA36:DT-36_J120
1111I_DA37:DT-37_J120
1112I_DA38:DT-38_J120
1114I_DA40:DT-40_J120
1116I_DA42:DT-42_J120
1125I_DA51:DT-51_J120
1128I_DA54:DT-54_J120
1134I_DA60:DT-60_J120
1140I_DA66:DT-66_J120
1142I_DA68:DT-68_J120
1146I_DA72:DT-72_J120
13I_DC-71:DG71_J119
19I_DC-65:DG65_J10
110I_DC-64:DG64_J119
112I_DC-62:DG62_J119
113I_DC-61:DG61_J10
116I_DC-58:DG58_J119
122I_DC-52:DG52_J119
125I_DC-49:DG49_J10
126I_DC-48:DG48_J10
144I_DC-30:DG30_J119
147I_DC-27:DG27_J119
149I_DC-25:DG25_J119
150I_DC-24:DG24_J119
153I_DC-21:DG21_J119
160I_DC-14:DG14_J119
166I_DC-8:DG8_J119
169I_DC-5:DG5_J119
176I_DC2:DG-2_J119
177I_DC3:DG-3_J119
180I_DC6:DG-6_J119
185I_DC11:DG-11_J119
189I_DC15:DG-15_J10
190I_DC16:DG-16_J119
1102I_DC28:DG-28_J119
1108I_DC34:DG-34_J10
1109I_DC35:DG-35_J119
1115I_DC41:DG-41_J119
1117I_DC43:DG-43_J119
1130I_DC56:DG-56_J10
1133I_DC59:DG-59_J10
115I_DG-59:DC59_J119
118I_DG-56:DC56_J10
131I_DG-43:DC43_J10
133I_DG-41:DC41_J119
139I_DG-35:DC35_J119
140I_DG-34:DC34_J119
146I_DG-28:DC28_J119
158I_DG-16:DC16_J119
159I_DG-15:DC15_J10
163I_DG-11:DC11_J119
168I_DG-6:DC6_J119
171I_DG-3:DC3_J10
172I_DG-2:DC2_J119
179I_DG5:DC-5_J119
182I_DG8:DC-8_J119
188I_DG14:DC-14_J119
195I_DG21:DC-21_J119
198I_DG24:DC-24_J119
199I_DG25:DC-25_J119
1101I_DG27:DC-27_J119
1104I_DG30:DC-30_J10
1122I_DG48:DC-48_J10
1123I_DG49:DC-49_J10
1126I_DG52:DC-52_J119
1132I_DG58:DC-58_J119
1135I_DG61:DC-61_J119
1136I_DG62:DC-62_J119
1138I_DG64:DC-64_J119
1139I_DG65:DC-65_J119
1145I_DG71:DC-71_J119
12I_DT-72:DA72_J120
16I_DT-68:DA68_J120
18I_DT-66:DA66_J120
114I_DT-60:DA60_J120
120I_DT-54:DA54_J120
123I_DT-51:DA51_J120
132I_DT-42:DA42_J120
134I_DT-40:DA40_J120
136I_DT-38:DA38_J120
137I_DT-37:DA37_J120
138I_DT-36:DA36_J120
145I_DT-29:DA29_J10
148I_DT-26:DA26_J120
152I_DT-22:DA22_J00
162I_DT-12:DA12_J120
164I_DT-10:DA10_J120
165I_DT-9:DA9_J120
170I_DT-4:DA4_J120
175I_DT1:DA-1_J120
181I_DT7:DA-7_J120
187I_DT13:DA-13_J120
191I_DT17:DA-17_J120
192I_DT18:DA-18_J120
193I_DT19:DA-19_J120
194I_DT20:DA-20_J120
197I_DT23:DA-23_J120
1105I_DT31:DA-31_J120
1106I_DT32:DA-32_J120
1107I_DT33:DA-33_J120
1113I_DT39:DA-39_J120
1118I_DT44:DA-44_J120
1119I_DT45:DA-45_J120
1120I_DT46:DA-46_J120
1121I_DT47:DA-47_J120
1124I_DT50:DA-50_J10
1127I_DT53:DA-53_J120
1129I_DT55:DA-55_J120
1131I_DT57:DA-57_J120
1137I_DT63:DA-63_J120
1141I_DT67:DA-67_J120
1143I_DT69:DA-69_J120
1144I_DT70:DA-70_J120
1147I_DT73:DA-73_J120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)