A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: 5AWH  PDB ID: 5AWH 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12C_A3:DT16_D-0.006-0.1730.159-13.2-12.2752.573
14C_A5:DT14_D-0.084-0.065-0.096-14.989-11.3384.833
15C_A6:DT13_D0.078-0.186-0.048-6.233-11.2350.61
19C_A10:DT9_D-0.126-0.081-0.272-2.929-16.7921.108
112C_A13:DT6_D-0.209-0.130.254-5.234-17.0943.139
13C_C4:DG15_D0.061-0.1010.045-3.393-14.665-0.604
16C_C7:DG12_D0.206-0.1530.26-3.583-9.8172.238
17C_C8:DG11_D0.251-0.110.364-10.837-8.957-0.653
110C_C11:DG8_D0.181-0.183-0.0725.711-14.3791.06
113C_C14:DG5_D0.235-0.1480.228-6.925-15.611-2.048
114C_C15:DG4_D0.008-0.0680.293-6.418-11.568-0.763
116C_C17:DG2_D-0.049-0.1-0.257-8.671-2.2390.306
117C_G18:DC1_D-0.52-0.411-0.691-0.356-0.797-1.428
11C_U2:DA17_D-0.3060.0250.567-12.702-18.776-4.797
18C_U9:DA10_D-0.087-0.1590.137-1.43-4.4790.227
111C_U12:DA7_D0.072-0.0910.595-20.334-2.13-2.103
115C_U16:DA3_D-0.047-0.10.079-9.829-12.3221.651
119E_A3:DT16_F0.19-0.1340.074-12.783-17.3733.331
121E_A5:DT14_F0.164-0.077-0.208-21.264-13.5062.735
122E_A6:DT13_F0.078-0.070.164-7.048-11.4020.221
126E_A10:DT9_F-0.08-0.1260.0149.657-25.0264.985
129E_A13:DT6_F-0.18-0.0950.156-11.007-14.701-0.656
120E_C4:DG15_F0.153-0.0970.051-7.402-14.960.3
123E_C7:DG12_F0.164-0.1290.231-2.303-9.297-0.811
124E_C8:DG11_F0.308-0.150.234-9.147-9.0131.085
127E_C11:DG8_F0.289-0.1410.0315.716-20.7222.123
130E_C14:DG5_F0.153-0.0920.174-7.25-12.911-0.228
131E_C15:DG4_F0.195-0.1070.342-7.487-9.47-1.44
133E_C17:DG2_F0.135-0.014-0.052-6.94-1.801-0.236
134E_G18:DC1_F0.323-0.1370.77716.847-8.286-2.025
118E_U2:DA17_F-0.360.0660.504-15.245-22.051-5.049
125E_U9:DA10_F-0.056-0.1090.0033.523-4.0330.355
128E_U12:DA7_F-0.159-0.1150.504-24.903-5.248-2.055
132E_U16:DA3_F0.147-0.1660.163-12.266-8.6312.765

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.