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As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 5B2J  PDB ID: 5B2J 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
112I_5CM-61:DG61_J119
165I_5CM-5:DG5_J119
175I_5CM5:DG-5_J119
1130I_5CM61:DG-61_J10
11I_DA-72:DT72_J120
14I_DA-69:DT69_J120
15I_DA-68:DT68_J120
17I_DA-66:DT66_J120
111I_DA-62:DT62_J120
118I_DA-55:DT55_J120
121I_DA-51:DT51_J00
125I_DA-45:DT45_J120
126I_DA-44:DT44_J120
127I_DA-43:DT43_J120
132I_DA-38:DT38_J00
138I_DA-32:DT32_J120
139I_DA-31:DT31_J10
140I_DA-30:DT30_J00
146I_DA-24:DT24_J10
147I_DA-23:DT23_J00
151I_DA-19:DT19_J120
152I_DA-18:DT18_J120
153I_DA-17:DT17_J120
154I_DA-16:DT16_J120
158I_DA-12:DT12_J10
164I_DA-6:DT6_J120
169I_DA-1:DT1_J120
170I_DA0:DT0_J120
174I_DA4:DT-4_J120
179I_DA9:DT-9_J120
180I_DA10:DT-10_J120
182I_DA12:DT-12_J120
192I_DA22:DT-22_J120
196I_DA26:DT-26_J120
199I_DA29:DT-29_J00
1106I_DA36:DT-36_J120
1107I_DA37:DT-37_J120
1108I_DA38:DT-38_J10
1110I_DA40:DT-40_J10
1112I_DA42:DT-42_J120
1121I_DA51:DT-51_J10
1123I_DA54:DT-54_J00
1129I_DA60:DT-60_J120
1135I_DA66:DT-66_J120
1137I_DA68:DT-68_J120
1141I_DA72:DT-72_J120
13I_DC-70:DG70_J10
19I_DC-64:DG64_J119
110I_DC-63:DG63_J10
116I_DC-57:DG57_J119
117I_DC-56:DG56_J10
123I_DC-48:DG48_J10
124I_DC-47:DG47_J10
141I_DC-29:DG29_J10
143I_DC-27:DG27_J10
144I_DC-26:DG26_J10
148I_DC-22:DG22_J10
157I_DC-13:DG13_J10
163I_DC-7:DG7_J119
173I_DC3:DG-3_J119
181I_DC11:DG-11_J119
185I_DC15:DG-15_J119
186I_DC16:DG-16_J119
191I_DC21:DG-21_J10
1104I_DC34:DG-34_J10
1105I_DC35:DG-35_J119
1111I_DC41:DG-41_J119
1113I_DC43:DG-43_J10
1124I_DC55:DG-55_J10
1128I_DC59:DG-59_J119
113I_DG-60:5CM60_J119
115I_DG-58:DC58_J119
119I_DG-54:DC54_J10
128I_DG-42:DC42_J10
130I_DG-40:DC40_J119
136I_DG-34:DC34_J119
137I_DG-33:DC33_J10
150I_DG-20:DC20_J119
155I_DG-15:DC15_J119
156I_DG-14:DC14_J119
160I_DG-10:DC10_J119
166I_DG-4:5CM4_J119
168I_DG-2:DC2_J119
176I_DG6:5CM-6_J119
178I_DG8:DC-8_J119
184I_DG14:DC-14_J119
193I_DG23:DC-23_J119
197I_DG27:DC-27_J119
198I_DG28:DC-28_J119
1100I_DG30:DC-30_J10
1118I_DG48:DC-48_J00
1119I_DG49:DC-49_J119
1126I_DG57:DC-57_J119
1127I_DG58:DC-58_J119
1131I_DG62:5CM-62_J119
1133I_DG64:DC-64_J119
1134I_DG65:DC-65_J10
1140I_DG71:DC-71_J10
12I_DT-71:DA71_J120
16I_DT-67:DA67_J120
18I_DT-65:DA65_J120
114I_DT-59:DA59_J10
120I_DT-53:DA53_J00
122I_DT-50:DA50_J10
129I_DT-41:DA41_J120
131I_DT-39:DA39_J120
133I_DT-37:DA37_J00
134I_DT-36:DA36_J120
135I_DT-35:DA35_J120
142I_DT-28:DA28_J00
145I_DT-25:DA25_J120
149I_DT-21:DA21_J120
159I_DT-11:DA11_J120
161I_DT-9:DA9_J120
162I_DT-8:DA8_J120
167I_DT-3:DA3_J120
171I_DT1:DA-1_J120
172I_DT2:DA-2_J120
177I_DT7:DA-7_J120
183I_DT13:DA-13_J120
187I_DT17:DA-17_J120
188I_DT18:DA-18_J120
189I_DT19:DA-19_J120
190I_DT20:DA-20_J120
194I_DT24:DA-24_J120
195I_DT25:DA-25_J120
1101I_DT31:DA-31_J120
1102I_DT32:DA-32_J10
1103I_DT33:DA-33_J120
1109I_DT39:DA-39_J00
1114I_DT44:DA-44_J120
1115I_DT45:DA-45_J120
1116I_DT46:DA-46_J120
1117I_DT47:DA-47_J00
1120I_DT50:DA-50_J00
1122I_DT52:DA-52_J00
1125I_DT56:DA-56_J00
1132I_DT63:DA-63_J10
1136I_DT67:DA-67_J120
1138I_DT69:DA-69_J120
1139I_DT70:DA-70_J120
1142I_DT73:DA-73_J10

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)