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As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 5CPK  PDB ID: 5CPK 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
152I_5CM60:DG86_J10
172I_5CM83:DG63_J119
182I_5CM93:DG53_J119
195I_5CM109:DG37_J10
1104I_5CM119:DG27_J119
1116I_5CM132:DG14_J10
11I_DA1:DT145_J120
14I_DA4:DT142_J00
18I_DA8:DT138_J120
19I_DA9:DT137_J10
112I_DA12:DT134_J00
115I_DA16:DT130_J120
116I_DA17:DT129_J00
120I_DA21:DT125_J120
121I_DA23:DT123_J00
124I_DA26:DT120_J120
125I_DA27:DC119_J10
128I_DA31:DT115_J120
129I_DA32:DT114_J120
138I_DA44:DT102_J00
141I_DA48:DT98_J120
142I_DA49:DT97_J120
143I_DA50:DT96_J120
147I_DA54:DT92_J10
148I_DA55:DT91_J10
154I_DA62:DT84_J00
156I_DA65:DT81_J00
161I_DA72:DT74_J120
162I_DA73:DT73_J120
166I_DA77:DT69_J120
167I_DA78:DT68_J120
174I_DA85:DT61_J120
175I_DA86:DT60_J120
179I_DA90:DT56_J120
184I_DA95:DT51_J120
185I_DA96:DT50_J00
189I_DA100:DT46_J120
190I_DA101:DT45_J120
192I_DA104:DT42_J10
197I_DA111:DT34_J00
1101I_DA116:DT30_J120
1106I_DA121:DT25_J10
1107I_DA122:DT24_J120
1111I_DA126:DT20_J120
1118I_DA134:DT12_J10
1122I_DA140:DT6_J120
13I_DC3:DG143_J119
111I_DC11:DG135_J119
139I_DC45:DG101_J10
140I_DC47:DG99_J00
155I_DC64:DG82_J119
158I_DC68:DG78_J119
160I_DC70:DG76_J119
169I_DC80:DG66_J119
191I_DC103:DG43_J10
1113I_DC129:DG17_J10
16I_DG6:DC140_J10
17I_DG7:DC139_J119
114I_DG15:DC131_J10
118I_DG19:DC127_J119
119I_DG20:DC126_J00
123I_DG25:DC121_J119
126I_DG29:DC117_J10
127I_DG30:DC116_J10
133I_DG38:DC107_J00
136I_DG42:DC104_J119
137I_DG43:DC103_J119
145I_DG52:DC94_J119
146I_DG53:DC93_J10
153I_DG61:5CM85_J119
157I_DG67:DC79_J119
164I_DG75:DC71_J119
165I_DG76:DC70_J119
173I_DG84:5CM62_J119
177I_DG88:DC58_J10
178I_DG89:DC57_J10
183I_DG94:5CM52_J119
187I_DG98:DC48_J119
196I_DG110:5CM36_J00
199I_DG114:DC32_J10
1100I_DG115:DC31_J119
1105I_DG120:5CM26_J10
1109I_DG124:DC22_J10
1110I_DG125:DC21_J00
1117I_DG133:5CM13_J10
1120I_DG137:DC9_J10
1121I_DG138:DC8_J10
1124I_DG143:DC3_J10
12I_DT2:DA144_J120
15I_DT5:DA141_J120
110I_DT10:DA136_J00
113I_DT13:DA132_J120
117I_DT18:DA128_J120
122I_DT24:DA122_J120
130I_DT33:DA113_J00
131I_DT36:DA110_J120
132I_DT37:DA109_J120
134I_DT40:DA106_J120
135I_DT41:DA105_J120
144I_DT51:DA95_J00
149I_DT57:DA89_J00
150I_DT58:DA88_J00
151I_DT59:DA87_J10
159I_DT69:DA77_J120
163I_DT74:DA72_J00
168I_DT79:DA67_J120
170I_DT81:DA65_J120
171I_DT82:DA64_J120
176I_DT87:DA59_J00
180I_DT91:DA55_J120
181I_DT92:DA54_J10
186I_DT97:DA49_J10
188I_DT99:DA47_J120
193I_DT105:DA41_J120
194I_DT106:DA40_J120
198I_DT113:DA33_J00
1102I_DT117:DA29_J00
1103I_DT118:DA28_J120
1108I_DT123:DA23_J120
1112I_DT128:DA18_J00
1114I_DT130:DA16_J120
1115I_DT131:DA15_J00
1119I_DT136:DA10_J120
1123I_DT142:DA4_J10

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)