A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
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NDB ID: PD0048  PDB ID: 5CRX 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12C_DA4:DT33_D120
13C_DA5:DT32_D00
110C_DA12:DT25_D120
112C_DA14:DT23_D120
115C_DA17:DT20_D120
117C_DA19:DT18_D00
122C_DA24:DT13_D120
124C_DA26:DT11_D120
127C_DA29:DT8_D120
128C_DA30:DT7_D120
132C_DA34:DT3_D120
14C_DC6:DG31_D119
17C_DC9:DG28_D119
114C_DC16:DG21_D10
120C_DC22:DG15_D119
125C_DC27:DG10_D119
18C_DG10:DC27_D119
113C_DG15:DC22_D119
119C_DG21:DC16_D10
126C_DG28:DC9_D119
129C_DG31:DC6_D119
11C_DT3:DA34_D120
15C_DT7:DA30_D120
16C_DT8:DA29_D120
19C_DT11:DA26_D120
111C_DT13:DA24_D120
116C_DT18:DA19_D120
118C_DT20:DA17_D10
121C_DT23:DA14_D120
123C_DT25:DA12_D120
130C_DT32:DA5_D120
131C_DT33:DA4_D120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)