A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: 5DGE  PDB ID: 5DGE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14022_A39A40:G467C469_221.784-2.1063.938-11.847-3.375-6.46513.333-8.8892.84217.102-60.024-13.905
14122_A40A41:U466G467_22-0.072-0.2593.537-1.70111.22558.359-0.873-0.023.4411.3931.72759.358
14222_A41A438:G465U466_22-0.0920.2463.626-7.6557.42375.748-0.044-0.1763.6296.0176.20576.383
15822_A67G69:U82G83_220.733-0.4033.727-12.094-1.73956.54-0.313-1.4883.526-1.81212.60557.738
16022_A93A399:U395G396_22-1.711-0.252.845-7.842.767-0.925-1.634-21.214-1.206-27.848-78.894-8.365
17822_A103C309:G357U358_221.13-2.463.127-8.8416.92597.514-1.735-0.8832.914.5945.86497.996
17722_A105A103:U358C308_222.957-3.954-2.71747.474104.50813.490.212-2.91-2.73278.03-35.446115.292
18522_A108G109:C305U306_220.43-1.0523.443.25820.10833.124-4.001-0.2572.46131.808-5.15438.736
18922_A112U113:A301U302_22-0.918-1.8652.7358.3749.62820.153-6.614.0441.25324.585-21.38223.818
19222_A119U120:U297C298_222.982-1.3382.995-11.8638.03948.398-2.024-4.1712.0259.56514.11550.352
19722_A124U125:U292U293_220.52-1.2543.598-0.6979.21548.722-2.223-0.6763.31611.0540.83649.538
19922_A138G142:A173A266_225.831-2.2654.123-6.2152.26273.883-1.963-5.0693.6321.8785.1674.137
110322_A145U146:A168A169_22-0.718-0.9513.594-21.2411.04930.29-1.671-2.2473.3471.76135.65736.867
110522_A147A148:C166U167_220.559-2.1143.988-0.63515.44248.803-3.665-0.6993.21718.1680.74851.048
110622_A148C149:G165C166_223.758-2.9083.467-13.89715.5142.268-4.615-5.5831.16120.11318.02246.908
111222_A182U183:A202U203_220.102-1.0853.256-7.84319.97328.286-4.435-1.2081.99735.17713.81235.371
112222_A206U207:C258U259_220.646-1.8313.9066.49422.63631.951-5.515-0.152.26335.699-10.24239.509
112622_A210U211:A254U255_220.873-1.4813.65412.8055.29530.952-3.5150.853.4469.357-22.62733.843
112922_A213G214:A251U252_22-1.296-0.9472.9582.8415.11863.716-1.421.3032.64514.106-2.6565.356
113322_A236C237:G228U229_222.408-0.9263.474-2.90517.93849.275-2.238-2.9232.86220.7183.35652.322
115222_A265U267:A288U289_22-2.388-0.9082.821-0.0233.50745.225-1.4423.0952.7484.5520.0345.353
115722_A271G273:U283G284_22-1.656-2.8735.46513.9240.3525.605-5.8388.0124.0080.725-28.85629.093
18322_A312A315:A352A353_224.833-0.6883.2566.722-18.0997.08210.096-9.083.311-65.661-24.38820.553
116022_A316C317:G347U348_220.264-2.3053.092-2.2441.73128.077-5.1-1.0242.9183.5564.61128.217
116322_A323U324:A344U345_22-0.649-1.2913.158-5.30919.05133.548-4.0070.4022.21529.998.35738.798
116822_A328G329:C339U340_22-0.201-1.6423.0722.0434.98222.279-5.6911.1442.61812.658-5.1922.913
117122_A366A367:U374U375_22-1.019-1.6722.841-6.6595.27334.619-3.3940.8322.7088.710.98735.615
117222_A367U368:G373U374_22-0.174-1.6793.3296.0417.98841.317-3.1050.8352.91711.125-8.41442.462
16122_A399A401:C394U395_22-0.081-1.3343.658-7.6574.81534.686-2.927-1.0743.397.9112.58135.811
16222_A401G404:C393C394_222.978-1.1543.863-0.393-2.79877.529-0.827-2.393.883-2.2330.31477.573
16622_A407C408:G389G390_22-1.2571.412.8892.0615.367-12.288-10.476-3.5952.253-23.4639.011-13.561
16922_A410C411:G422G423_221.268-1.3482.838-5.9288.32325.423-4.423-3.81.96618.01112.82927.368
14322_A438U439:A464G465_22-3.307-3.5752.8217.805-1.438.699-10.17412.041-1.463-5.144-64.03119.853
14522_A441C442:G462U463_22-0.242-2.5153.039-1.54.33934.131-4.8460.2022.7177.3512.54234.429
15622_A452G63:C87U88_22-2.738-1.9582.89-2.7253.02254.14-2.312.8532.9093.3152.9954.281
1122_A468G595:C31U32_221.791-2.8533.642-1.76110.92178.737-2.545-1.4533.2558.5691.38179.385
118322_A485G486:U501U502_223.2-1.7074.62520.6380.27824.686-3.1780.8115.5910.544-40.42232.074
118222_A511A538:G540A477_22-2.527-4.534-3.407-22.91100.611164.24-2.0841.312-3.80350.56311.514170.229
118722_A515G516:C536G537_220.395-0.6423.622-4.7395.36557.851-0.969-0.6793.5155.5234.87958.254
118822_A518A520:U532U533_22-4.087-1.4472.9177.9445.06151.993-1.8855.0012.1755.719-8.97752.781
118922_A520U522:C531U532_22-1.033-1.4655.80814.66414.47149.142-3.2092.7474.76716.583-16.80553.038
119522_A550G557:C587U588_22-1.532-0.9242.76-1.4664.85445.137-1.5561.8762.6976.31.90245.406
120222_A567G568:C575G576_220.438-1.752.7293.013.67243.158-3.202-0.3662.13218.03-3.95645.268
1622_A599U600:A26U27_220.587-1.573.481.4915.92922.813-6.809-0.8912.00935.243-3.29727.803
1822_A601U602:G23U24_22-0.237-0.5582.928-12.1826.21444.572-1.175-0.622.87.97315.63146.52
11122_A604C4:G20U21_22-3.405-1.2255.18222.0592.93258.436-1.3774.7343.7452.892-21.75362.179
120922_A615G616:C1105U1106_22-0.332-1.6933.462-3.46210.67231.65-4.660.0162.78218.8416.11333.532
121122_A622G1032:U1103U1104_221.149-3.0723.4765.63512.7623.516-18.109-2.011-1.42369.453-30.66614.385
128122_A746C747:G802U805_223.664-0.4734.229-34.884-6.05558.061-0.18-4.7342.012-5.70132.84567.193
128822_A760G761:A789U790_22-0.778-0.4823.2810.3927.71365.467-0.7550.7313.2097.106-0.36165.87
129022_A774G775:U785C786_221.139-4.593-1.936135.245-104.69-56.221.178-0.882-4.18653.79569.496-172.089
129322_A814G816:A855U857_224.720.8410.967-106.80593.805151.8050.374-2.4210.2547.25353.802170.938
114522_A844G845:C827U828_22-0.324-1.3953.417-12.0636.77831.78-3.416-1.3612.9911.70820.83834.59
114822_A847C848:G824U825_22-0.28-1.4573.7615.1386.35340.046-2.8651.033.449.161-7.4140.837
115122_A850U851:U821U822_22-2.216-1.282.782-3.3789.54747.75-2.1622.4682.63711.6414.11948.751
122922_A865G866:C962U965_222.275-2.4563.4015.4576.43949.254-3.392-2.2863.2957.661-6.49249.927
123322_A869C870:G957U958_220.694-1.153.2886.5387.0244.73-2.09-0.3263.1499.101-8.47545.695
124422_A881U882:U946U947_220.806-0.742.8841.0130.38638.981-1.149-1.12.8960.579-1.51738.995
124722_A884G885:C927U928_220.237-1.2082.9945.390.37429.835-2.3810.5462.9750.72-10.36230.31
125022_A887U888:A924G925_22-0.39-0.7123.352-0.6369.3334.459-2.5140.5443.06815.4011.04935.668
125422_A891A892:U920U921_22-0.442-1.0413.204-1.5865.90737.488-2.3220.4853.0279.1162.44837.966
125522_A892U893:A919U920_220.087-1.7093.2222.46516.50923.959-6.3990.2761.71234.866-5.20729.131
129622_A900G902:A907U909_22-1.864-0.7436.6041.20421.97294.159-1.2661.2956.35514.847-0.81396.102
129722_A933U935:G876A944_222.8320.093-0.133-66.462153.4413.9010.529-1.216-1.04981.87335.463167.31
121622_A966A967:U632U633_22-1.698-2.2113.046-6.1678.39233.556-4.7971.9862.69314.1210.37535.09
121722_A967U968:G631U632_220.701-0.7983.1810.6462.91535.458-1.716-1.0563.1194.776-1.05835.579
122022_A970A971:G628U629_225.809-1.5422.8957.1617.74933.817-3.695-8.4883.58512.935-11.95435.379
122122_A971G972:C627G628_221.143-0.8683.361-6.85111.31165.84-1.226-1.3023.07610.2986.23867.008
122322_A973A974:C625U626_22-0.832-1.213.131-3.61918.27522.066-5.910.9831.75439.8267.88828.804
122422_A974C975:G624C625_22-0.515-1.23.065-6.3210.70337.544-1.9240.033.0861.0829.73638.06
130122_A979G980:C1021C1022_22-0.16-0.5443.867-18.04910.91253.52-1.276-1.0043.58511.62219.22357.239
130522_A983G984:U1017U1018_22-0.122-2.1842.802-0.84519.75514.022-8.470.151-0.13854.9452.3524.2
131022_A992A993:G1011U1012_22-1.8541.8215.352-119.644-118.888-30.6720.904-2.7611.39262.378-62.775-169.073
131122_A993G994:C1010G1011_22-0.221-0.3793.7075.09113.2455.962-1.1950.5383.51213.863-5.33157.591
131322_A995U996:G1008U1009_220.742-1.6543.2415.4580.32931.444-3.069-0.3513.3030.601-9.97731.904
131522_A1036C1037:G1094U1095_221.066-1.573.1597.4786.31634.971-3.37-0.7082.99710.265-12.15336.274
131922_A1065C1066:G1053U1054_220.988-2.1253.219-2.0671.02230.939-4.163-2.2313.0781.9133.86931.023
132322_A1069C1070:G1048U1049_220.3-1.4373.371-1.41611.1228.163-4.887-0.8452.6121.7912.77530.27
133022_A1076C1077:G1041G1042_220.756-1.073.03-5.0395.07119.617-4.817-3.9392.41214.28314.19520.867
134022_A1113U1115:A1131A1132_222.455-2.2681.586125.482123.519-129.7430.9031.4621.369-61.88962.873-178.334
134222_A1116U1117:U313G1130_22-3.682-1.9942.631-3.79811.1439.927-3.7294.8772.34215.95.42141.558
11622_A1138A1139:U8G16_22-2.327-1.7662.6775.532-2.6884.934-7.77827.3480.646-22.415-46.147.884
11722_A1139G1140:C14U8_223.681-1.3484.597-10.88715.45891.886-1.309-2.7994.03510.6657.51193.382
12022_A1142A1143:A11U12_220.572-1.8093.8197.89-3.24139.669-2.1740.2383.986-4.71-11.46640.54
12122_A1143U1144:G10A11_22-0.466-1.9123.3015.738.01330.07-4.8821.8372.58814.948-10.68931.607
12522_A1147C1148:G1629U1630_22-0.148-1.2223.3611.8511.80232.044-3.8840.5342.7420.51-3.21634.143
12822_A1151A1152:U1626U1627_22-0.346-1.2143.399-0.5184.95931.886-3.0770.5293.1848.9580.93632.263
12922_A1152G1153:C1625U1626_22-0.463-0.8923.4-3.4288.63335.095-2.6610.2563.1314.0165.56636.266
13422_A1157C1618:C1620U1621_22-1.3362.62-0.334129.65994.475-171.511-1.302-0.678-0.367-47.25364.851-178.558
136922_A1203A1556:U1552G1553_22-0.441-3.182-3.121165.093-47.53492.852-1.873-0.753-1.949-24.079-83.63174.35
138422_A1211G1212:C1451U1452_221.287-2.0623.83110.60517.97422.541-7.631-0.2392.08137.291-22.00130.627
138922_A1219C1220:G1263G1264_220.972-0.3453.9-0.703-2.38467.375-0.202-0.9083.9-2.1490.63367.416
139122_A1221C1222:G1261U1262_220.06-1.2383.0852.20810.72727.549-4.4120.2932.43921.481-4.42129.607
139322_A1223A1224:U1259U1260_22-0.769-1.6893.6299.46816.3138.482-3.9431.9992.50123.132-13.42842.697
139522_A1230U1231:U1254U1257_226.0430.5051.86214.71322.55657.318-0.341-5.2573.17322.221-14.49562.84
139922_A1234G1245:U1250U1251_222.764-2.522-0.025-87.806-131.9104.344-1.227-1.4190.324-67.80345.137166.835
140122_A1236G1237:C1248U1249_220.911-1.4133.8131.70411.65540.832-3.276-1.0663.3416.3-2.38342.427
140322_A1238U1239:C1246U1247_221.755-1.8822.532.9613.61188.094-1.554-1.2062.3289.738-2.11788.964
141022_A1275U1276:A1436C1431_220.958-4.0143.898-0.67420.993-21.1130.2691.6275.614-45.314-1.456-29.697
142722_A1296G1297:A1300U1301_22-4.632-2.1243.0827.1714.94359.387-2.3324.9332.3924.96-7.19659.965
143522_A1336A1410:G1387U1415_224.7974.0684.082130.931-35.4-10.103-2.0783.023-3.16522.95384.896-135.814
144022_A1344A1345:U1380U1381_22-1.022-0.5963.1662.8781.62932.859-1.3112.2623.0362.871-5.07233.02
144122_A1345A1348:U1377U1380_221.5661.5964.97918.34411.263102.2290.76-0.585.2467.18-11.695103.846
144222_A1348G1349:C1376U1377_220.301-1.0972.857-10.70414.10827.337-3.905-2.0131.84926.60420.18532.48
145122_A1357G1358:C1365U1366_220.034-1.8822.7561.7217.15131.117-4.430.1812.27613.101-3.15331.954
145322_A1388C1389:G1412G1409_22-2.4745.419-3.194-13.082-2.68435.0358.1265.416-2.536-4.27220.81937.419
145522_A1391U1392:A1406U1407_220.217-1.3813.446-2.20315.01235.083-3.962-0.6032.64123.5883.46138.128
143622_A1410C1338:G1386G1387_22-2.727-1.959-0.165123.074-120.89-173.0830.977-1.366-0.1360.4561.542-179.549
136622_A1469C1470:G1574G1170_22-0.4160.492.8383.88-4.52224.3092.2651.9352.608-10.536-9.04125.018
146122_A1471C1472:G1536U1538_221.524-1.8883.164-12.9756.111-71.6811.3840.8483.489-5.168-10.971-72.913
146322_A1475C1476:G1531U1532_221.061-0.7882.8652.06-0.14242.537-1.072-1.2772.913-0.196-2.83842.585
146722_A1479G1480:C1527U1528_22-0.646-2.0664.0127.92724.13540.656-4.6091.4732.34531.329-10.2947.654
146922_A1487G1488:C1518U1519_220.858-1.5173.123-9.21.7129.014-3.197-3.2942.6413.30617.78930.455
137022_A1556U1560:U1551U1552_223.013.538-1.818163.6729.363-29.314-1.387-0.681-3.932-15.58586.87-166.732
138022_A1569A1570:G1541G1542_220.095-0.2262.775-6.2979.79136.002-1.409-0.8282.57715.3559.87537.778
138122_A1570C1571:G1540G1541_220.565-0.7553.0231.1772.59859.315-0.883-0.5163.02.623-1.18859.377
134822_A1576A1577:U1168G1169_221.093-1.3074.0691.93716.82556.742-2.365-0.993.61717.283-1.9959.014
134922_A1577U1578:G1167U1168_220.56-1.583.0721.72-4.00344.962-1.712-0.5813.212-5.22-2.24245.161
147922_A1586A1587:U1609G1610_22-0.619-0.5673.2440.1920.7662.309-0.5820.6073.2360.735-0.18662.313
148022_A1587G1588:U1608U1609_220.419-1.9483.486-5.35715.21732.807-5.085-1.3642.29625.1388.84936.461
148522_A1592A1593:U1603U1604_220.991-0.7553.883-4.6223.78140.385-1.566-2.0113.6715.4416.65140.806
148622_A1593G1594:C1602U1603_22-1.142-1.4082.892.4756.60337.501-2.8532.012.53710.16-3.80938.135
148922_A1719G1720:A1681U1682_220.986-0.9252.8278.42518.94110.718-0.748-0.512.7511.451-5.094112.005
149122_A1721A1722:G1679G1680_22-0.15-0.4223.262-8.00219.84728.377-3.539-0.8992.4334.89814.0735.409
149222_A1722U1723:A1678G1679_221.214-1.1233.737-6.5352.68964.596-1.172-1.4373.5692.5096.09664.939
149822_A1728C1729:G1672G1673_220.931-1.1173.131-7.9180.37636.605-1.787-2.4152.8640.59112.42837.425
150022_A1730A1731:G1670A1671_220.729-2.0533.32210.3312.421-26.0633.6563.9372.995-5.10821.792-28.105
150122_A1731A1732:U1669G1670_220.375-0.6373.76-1.0777.5163.778-0.967-0.4053.6677.0811.01564.181
150222_A1732C1733:G1668U1669_22-0.337-1.0842.9651.5885.75236.798-2.3680.7132.7549.038-2.49537.262
151022_A1740U1741:A1660U1661_221.118-0.6852.5634.552.36635.153-1.399-1.3022.6323.891-7.48435.513
151422_A1744G1745:A1655U1656_22-1.687-0.983.94110.67421.24460.491-1.9372.0913.17220.266-10.18264.582
151622_A1746G1747:C1653G1654_221.659-0.343.913-6.50919.52360.679-1.314-1.9013.49518.7546.25363.758
151922_A1749A1750:U1650A1651_22-0.725-1.6743.356-6.8448.88817.871-8.126-0.7522.38425.59519.70921.076
152022_A1750C1751:G1649U1650_220.154-1.4192.9542.6037.52931.319-3.6940.1192.55713.67-4.72732.292
152322_A1753A1754:C1646U1647_222.1961.7710.442145.665-88.9691.9471.037-0.8550.978-45.16-73.947173.527
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1335277_G1G2:U119C120_770.263-2.1633.003-2.0369.8425.808-6.427-0.9432.02921.0424.35427.664
1335377_G2U3:A118U119_770.007-1.673.519-3.427.94238.636-3.426-0.4233.11711.8245.09139.556
1335677_G5C6:G115C116_770.258-1.7313.178-5.3695.93927.951-4.641-1.5892.66711.98710.83729.053
1335877_G7G8:C113U114_77-0.792-1.4082.914-2.94-1.60837.14-2.0090.8853.022-2.5184.60537.286
1335977_G8C9:G112C113_770.705-1.0912.9443.81912.75132.01-3.512-0.6832.41421.973-6.58134.6
1339177_G30U31:A46C47_770.447-1.9783.4665.9710.35734.986-4.5090.0922.82416.638-9.59136.912
1339577_G37U38:A42C44_77-1.959-1.6924.7010.86816.07451.206-3.2612.2514.00818.093-0.97753.514
1336277_G60G61:C18C19_770.248-1.2073.5070.1075.1239.273-2.412-0.3533.337.579-0.15839.592
1336377_G61U62:A17C18_77-0.485-1.2863.124-3.5932.7932.458-2.7340.2743.0414.9616.38832.766
1336677_G65A66:U14C15_77-0.903-2.2513.6137.8191.51741.202-3.3152.1323.3142.131-10.98741.931
1336877_G67C68:G110U111_770.586-1.4322.9510.2277.78240.724-2.742-0.8072.64811.06-0.32341.431
1337277_G71A72:U106C107_77-0.281-1.0382.9386.493-3.28736.974-1.2221.1992.928-5.123-10.11737.659
1337577_G75A76:A103A104_772.711-0.998-1.486-88.243-150.576-154.4150.3631.436-1.33675.347-44.156-178.789
1337977_G80U81:G99C100_77-0.045-2.2543.454-3.015-1.19234.879-3.555-0.4093.518-1.9835.01635.025
1338177_G82U83:A97C98_771.311-1.8953.2737.30714.56927.863-5.8-1.1692.29327.481-13.78232.198
1338477_G85G87:C94A95_771.295-2.5393.7030.8223.37327.572-6.171-2.483.417.041-1.71727.786
1338577_G87G88:C93C94_77-0.559-1.9613.611-2.5127.50533.564-4.5310.5353.14512.7764.27634.459
1338677_G88G89:A92C93_77-3.172-1.7632.219-10.841-5.91662.238-1.4752.6492.821-5.66410.37963.331
1335477_U3U4:A117A118_77-0.742-1.4213.036-3.6662.23428.52-3.3150.7332.9894.5027.38828.835
1335577_U4G5:C116A117_77-0.499-1.1193.2842.07413.8736.54-3.250.9822.67121.187-3.16939.053
1339277_U31U32:A45A46_77-0.062-1.7513.293-7.22813.51728.679-5.267-1.0292.21925.14713.44832.442
1339377_U32C36:G41A45_77-2.5313.0072.805-1.036-15.015136.2561.6951.3572.653-8.0820.557136.652
1336177_U59G60:C19A20_770.177-1.8382.7774.9441.77328.524-3.9980.5592.6523.561-9.92828.994
1336477_U62A63:U16A17_77-0.225-1.1083.0843.68528.9226.071-4.50.71.25848.67-6.20138.921
1337177_U70G71:C107A108_77-0.077-1.5623.077-7.5462.43930.968-3.247-1.1282.8864.47613.8531.944
1337777_U78A79:G101A102_775.278-1.623.478-0.6951.195-11.0626.28925.9783.952-6.167-3.588-11.148
1338077_U81G82:C98G99_77-1.746-2.6712.741-3.3628.823.609-7.9313.2641.86620.4937.82925.394
1338277_U83A84:U96A97_77-0.126-1.4393.6952.74724.25345.22-3.4150.3442.64129.175-3.30551.081
1339688_A40A41:G103A105_88-0.337-0.3962.994-0.143-6.91116.994-0.1670.1963.007-4.050.084117.122
1339788_A41G42:U102G103_880.988-0.4314.028-7.36216.94361.477-1.293-1.3183.68316.1877.03363.932
1339988_A43A44:U100U101_88-0.528-1.7663.6285.9771.02238.175-2.8061.6013.4631.551-9.06838.636
1340088_A44C45:G58U100_880.43-1.1182.8590.1922.49137.077-2.04-0.6532.7833.911-0.30137.158
1340888_A65A66:U93C94_88-0.027-0.9443.3990.7840.3447.666-1.1960.0993.3920.421-0.9747.673
1340988_A66U67:A92U93_88-0.266-1.4223.899-8.0985.98941.813-2.638-0.5783.6598.24811.15342.956
1341488_A72C83:A80G78_882.0446.3730.681-112.06293.985-119.165-3.2241.029-0.645-48.416-57.728-163.1
1340188_C45G46:C57G58_881.153-1.4873.102-1.5035.73431.788-3.586-2.312.74210.3572.71532.322
1340388_C47C62:U55G56_88-0.413-2.372.98912.07311.46145.515-3.6271.2752.19614.263-15.02448.312
1340488_C62G51:A53U55_880.5161.2647.0589.0788.484169.860.611-0.2347.0694.259-4.557169.919
1341688_C115G116:C137G107_88-1.569-3.8242.943-2.672-3.112.449-5.503-15.884.877-44.87238.5564.775
1341888_C117C118:G135G136_88-0.793-2.2983.2654.4513.57425.636-5.9562.8622.7497.929-9.87626.253
1341988_C118C119:G134G135_88-0.261-2.2183.175-1.10610.74228.592-6.0370.3072.22320.8342.14630.524
1342088_C119C120:G133G134_880.194-1.7623.734-1.0869.56633.437-4.512-0.5023.11916.2131.84134.757
1342188_C120U121:G132G133_880.373-2.0762.8186.2265.29635.302-3.9560.1232.5188.591-10.09936.207
1339888_G42A43:U101U102_88-0.529-2.1582.948-14.6942.54130.365-4.095-1.2732.7264.52526.16433.752
1340288_G46C47:G56C57_88-0.226-1.7953.271.0-2.35234.684-2.6390.5333.373-3.938-1.67534.775
1340588_G49C50:G75C76_880.27-1.813.056-2.261-0.39330.971-3.311-0.9113.051-0.7354.22731.054
1340688_G63U64:A96A97_88-0.425-2.853.477-7.0693.79928.275-6.458-0.7173.0897.58614.11429.369
1341188_G68U69:A89C91_881.112-1.383.2031.1176.2131.264-3.581-1.8332.91911.378-2.04731.878
1341388_G70A71:G87A88_880.023-2.1134.989-3.376-1.283-8.47217.357-10.894.3058.209-21.604-9.208
1341588_G114C115:G107C108_88-0.141-2.3473.0870.7430.74137.442-3.7470.313.0381.154-1.15737.456
1341788_G116C117:G136C137_880.699-1.3723.5431.9315.542.747-2.441-0.753.3767.503-2.63443.124
1342488_G123G124:C129C130_880.463-1.7543.4431.66313.55328.667-5.566-0.562.41125.618-3.14331.691
1340788_U64A65:C94A96_883.572-2.1472.902-17.3434.06335.785-3.44-6.4770.9016.16426.31239.843
1341088_U67G68:C91A92_88-1.028-1.7272.9083.8546.39635.072-3.5672.1292.44310.466-6.30735.834
1341288_U69G70:A88A89_88-0.1531.5142.602-2.3669.91361.9051.0840.0582.7959.5672.28462.656
1342288_U121U122:A131G132_880.239-2.123.0685.51911.56923.816-6.9090.6171.86425.779-12.29827.002
1342388_U122G123:C130A131_88-0.266-1.7843.3340.91810.13929.461-5.1260.662.58419.227-1.74131.134

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.