A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: 5DGV  PDB ID: 5DGV 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14122_A39A40:G467C469_221.601-2.5823.934-7.738-8.764-8.34918.825-1.0951.5840.92-36.129-14.358
14222_A40A41:U466G467_220.137-0.2253.69-1.08814.95664.854-0.877-0.1743.56713.7541.00166.38
14322_A41U439:A464U466_22-1.177-3.8696.0644.7221.16283.202-3.6911.0555.09715.704-3.50285.48
15422_A46G48:C431G432_22-2.767-2.1252.58769.298-131.554117.525-0.4541.7232.532-67.706-35.665163.912
15822_A51G53:C427U440_225.35-0.9845.968-4.683.182171.701-0.499-2.6915.951.5952.346171.712
16322_A67G69:U82G83_220.784-0.7753.514-7.3432.21855.857-0.954-1.2683.3642.3557.79856.339
16522_A93A399:U395G396_22-1.972-0.2392.972-6.1224.838-3.419-6.257-23.234-0.087-41.155-52.077-8.518
18322_A103C309:G357U358_221.334-2.0213.262-6.0976.30595.718-1.466-1.03.094.2454.10596.021
18222_A105A103:U358C308_223.752-4.412-2.02341.14582.88217.557-0.7-3.721-2.65673.172-36.32593.811
19022_A108G109:C305U306_22-0.043-0.5433.128-0.8587.67235.717-1.863-0.0432.95212.3311.37936.516
19422_A112U113:A301U302_22-0.636-1.4873.023-3.90412.44522.99-6.0130.5292.0428.4738.93226.389
110322_A124U125:U292U293_220.684-0.7983.4572.23711.85542.029-2.248-0.6983.16116.134-3.04543.651
110522_A138G142:A173A266_225.747-1.7664.107-10.4630.84978.509-1.413-4.8423.4280.6688.23479.096
110922_A145U146:A168A169_22-0.619-1.0743.327-15.974-4.60634.165-1.013-1.2693.39-7.32725.41137.886
111122_A147A148:C166U167_220.844-2.0713.458-4.125.66950.453-2.811-1.2743.156.6134.80650.905
111222_A148C149:G165C166_223.643-2.8433.661-5.32919.6641.723-5.093-5.0391.76525.8387.00346.23
111822_A182U183:A202U203_22-0.449-1.3573.2410.03512.624.06-5.7380.9642.2627.909-0.07727.117
112422_A188C189:G196A197_220.979-0.6313.0976.737-10.08255.72-0.114-0.6613.246-10.647-7.11456.92
112822_A206U207:C258U259_220.606-1.9683.9831.82120.18332.208-5.78-0.6842.4132.66-2.94737.909
113222_A210U211:A254U255_220.524-1.8443.5120.3025.42931.896-4.298-0.8853.1689.791-0.54532.344
113522_A213G214:A251U252_22-0.918-0.8853.361-2.00111.80764.747-1.3020.7633.210.9271.85265.726
113822_A236C237:G228U229_221.574-0.8983.338-13.3119.7446.449-1.766-2.832.59511.91716.28749.137
115322_A265U267:A288U289_22-1.653-1.1542.8962.6894.49148.722-1.6832.1682.6975.426-3.24848.985
18822_A312A315:A352A353_224.831-0.5753.34110.374-20.37.3249.467-6.1043.607-64.49-32.95623.93
115922_A316C317:G347U348_22-0.056-2.3523.4028.685.47832.197-4.9221.4792.8649.578-15.17733.753
116222_A323U324:A344U345_22-0.942-1.1023.607-2.99226.98636.301-3.9220.9542.35637.5524.16345.056
116722_A328G329:C339U340_220.371-1.8013.1680.8411.24730.644-3.639-0.5423.1032.359-1.5930.68
117022_A366A367:U374U375_22-0.724-1.3693.06-1.5774.25434.245-2.9080.9962.9047.1852.66434.535
117122_A367U368:G373U374_22-0.036-1.323.077-0.6954.22139.854-2.37-0.022.9286.1711.01640.074
16622_A399A401:C394U395_22-0.359-1.5373.115-6.716-0.9638.502-2.186-0.2453.167-1.44210.08939.073
16722_A401G404:C393C394_223.535-1.2343.55-0.976-2.72973.097-0.94-3.03.547-2.290.81973.146
17122_A407C408:G389G390_22-1.21.2383.0643.18310.047-11.07-11.413-2.3761.662-41.67713.202-15.274
17422_A410C411:G422G423_220.793-1.2462.815-12.3241.79525.657-2.861-3.862.1263.77325.89828.474
14522_A441C442:G462U463_22-0.614-2.5633.5273.1526.69835.481-5.0631.432.94710.844-5.10436.221
14822_A446U447:A460C444_22-0.663-0.4423.390.32122.31465.962-1.2250.5953.1219.916-0.28769.229
16122_A452G63:C87U88_22-2.744-2.0033.0171.3982.38252.169-2.4163.1992.862.707-1.58852.237
1122_A468G595:C31U32_221.611-3.0713.807-4.6199.24185.139-2.492-1.3023.4516.8083.40385.644
117922_A483A485:U502U504_220.008-3.5936.271-13.236-0.03965.95-3.247-0.9996.174-0.03512.03467.118
118022_A485G486:U501U502_221.844-2.3644.3714.7432.76724.079-5.7691.2214.4455.951-31.70628.311
117822_A511A538:G540A477_22-3.294-4.49-3.192-28.41294.613174.493-2.1891.665-3.31247.33814.215176.416
118322_A515G516:C536G537_221.102-0.7563.471-1.4557.25756.847-1.202-1.2333.3337.5881.52157.287
118422_A518A520:U532U533_22-2.779-1.0843.6639.98624.90752.845-2.3873.3432.45626.17-10.49258.828
118522_A520U522:C531U532_22-0.638-1.6295.27114.66413.95550.277-3.1232.0984.3815.713-16.51153.953
119022_A550G557:C587U588_22-1.818-1.0943.14210.244-2.87343.009-1.2083.2842.725-3.849-13.72244.245
119722_A567G568:C575G576_220.354-1.3692.7764.65816.54947.342-2.556-0.1522.23319.861-5.5950.198
1622_A599U600:A26U27_220.746-1.2283.0221.901-0.82825.424-2.559-1.183.107-1.878-4.3125.507
1822_A601U602:G23U24_22-0.069-1.1133.028-2.0716.64340.112-2.263-0.1072.8179.5972.99240.686
11122_A604C4:G20U21_22-2.901-1.1155.33244.4478.4850.434-1.475.0322.1958.315-43.58266.752
120222_A615G616:C1105U1106_22-0.53-1.83.434-0.3797.60431.948-4.4770.8742.94513.5760.67732.82
120422_A622G1032:U1103U1104_221.277-2.9123.2676.96210.767.22-17.792-0.8420.08350.982-32.98914.702
126722_A713G714:C724U725_222.775-1.1063.2999.767-11.29230.5520.275-2.8784.118-19.999-17.29933.927
127722_A760G761:A789U790_22-0.404-0.5423.5862.9444.89263.805-0.7410.5193.5214.619-2.77964.033
127922_A774G775:U785C786_220.576-4.9991.558135.664-109.41547.794-1.3851.0973.911-55.773-69.154174.778
128322_A811A814:U857G816_22-0.549-4.6451.335-21.109-18.913-0.2366.5642.139-3.49759.744-66.683-28.343
115122_A844G845:C827U828_22-0.22-1.4283.443-6.5738.97328.623-4.463-0.8752.85517.34412.70630.666
122222_A865G866:C962U965_222.769-1.8933.1492.5539.77549.66-2.858-3.072.88211.502-3.00450.613
122622_A869C870:G957U958_220.305-1.0243.05-10.3058.18344.544-1.924-1.1732.70210.52613.25546.352
123722_A881U882:U946U947_220.582-0.6042.773-3.237-5.14440.698-0.385-1.1272.773-7.3464.62341.13
124022_A884G885:C927U928_22-0.539-0.7023.1782.2166.16432.378-2.2251.3042.95610.914-3.92433.016
124322_A887U888:A924G925_220.062-0.963.62-4.9311.2629.423-3.921-1.0643.01121.0499.21531.835
124722_A891A892:U920U921_22-0.587-0.9653.122-6.1169.93127.826-3.734-0.0262.69319.59512.06930.127
124822_A892U893:A919U920_220.584-1.6513.2271.4895.30226.105-4.884-0.8992.8711.574-3.2526.67
128622_A933U935:G876A944_222.7880.239-0.04-67.114151.789.40.523-1.227-0.90981.78336.163166.003
120922_A966A967:U632U633_22-0.961-1.8763.332-2.4397.34334.281-4.1751.2382.93912.2644.07435.118
121022_A967U968:G631U632_220.456-1.2483.3163.8973.15341.67-2.073-0.2293.2464.414-5.45441.957
121322_A970A971:G628U629_225.92-1.6372.5831.5224.9837.608-3.022-8.9482.5827.68-2.34737.954
121422_A971G972:C627G628_220.773-1.0573.798-1.43111.22660.944-1.618-0.8273.55610.9671.39861.886
121622_A973A974:C625U626_22-0.312-1.4282.751-9.8330.79224.833-3.268-1.5152.6341.75521.79926.692
121722_A974C975:G624C625_220.068-1.4383.2662.3410.93743.315-2.0360.1343.2351.269-3.16943.385
129022_A979G980:C1021C1022_22-0.152-1.1283.863-1.87713.91151.338-2.280.0333.47315.7232.12153.097
129422_A983G984:U1017U1018_22-0.027-1.8183.003-2.72813.8321.066-7.195-0.5391.52733.4286.59325.303
129922_A992A993:G1011U1012_22-5.273-0.8491.049-113.959-127.452-171.5010.449-2.6590.73963.735-56.988-179.332
130022_A993G994:C1010G1011_22-0.072-0.4953.586-0.6639.11157.975-1.020.0363.489.3360.67958.629
130222_A995U996:G1008U1009_220.383-1.6343.161-0.8854.20433.806-3.414-0.7862.9327.1931.51434.07
130522_A1036C1037:G1094U1095_221.285-1.7693.3724.3755.29237.496-3.392-1.4043.2268.148-6.73738.097
130722_A1061U1063:U1056U1058_226.83-2.225-1.26458.409140.805-75.2051.6993.243-1.225-75.26931.224-158.244
131022_A1065C1066:G1053U1054_220.963-2.2843.2411.054-0.82135.879-3.588-1.4113.317-1.333-1.7135.903
131422_A1069C1070:G1048U1049_220.011-1.6853.379-0.5793.25132.642-3.547-0.1193.25.7661.02732.804
132122_A1076C1077:G1041G1042_220.85-1.4133.08-5.7352.42529.646-3.147-2.6712.7494.67511.05530.278
133122_A1113U1115:A1131A1132_22-3.1221.4790.668-121.348-125.59123.0880.9021.4041.114-63.02860.899177.445
133322_A1116U1117:U313G1130_22-4.009-1.9452.533-2.30914.28634.428-4.3736.061.86422.9233.70537.261
11622_A1138U8:U15G16_22-1.2380.383.615-4.17614.31810.745-8.4991.0532.69752.24615.23818.365
12022_A1142A1143:A11U12_220.114-1.6833.9398.8549.86140.446-3.4770.8793.40713.822-12.4142.475
12122_A1143U1144:G10A11_22-0.942-1.7533.507-5.6475.43530.484-4.3050.6253.27110.12810.52331.453
12522_A1147C1148:G1629U1630_22-0.216-0.8773.153-0.15915.14128.194-4.0750.3662.38628.6190.30131.93
12822_A1151A1152:U1626U1627_22-1.078-1.2823.877-0.6193.15141.184-2.2151.453.7884.4720.87941.304
12922_A1152G1153:C1625U1626_22-0.189-1.4113.203-3.2978.81323.585-5.525-0.4362.52220.5437.68725.368
13422_A1157C1618:C1620U1621_22-1.3222.418-0.625137.76995.074-152.516-1.165-0.725-0.674-47.63969.032-177.01
13622_A1160C1161:G1616U1617_220.267-1.1253.5196.9525.36936.371-2.5060.5553.3188.45-10.94337.382
136022_A1203A1556:U1552G1553_220.015-3.62-2.867157.409-50.544121.559-2.005-0.604-1.963-25.555-79.586172.851
137422_A1211G1212:C1451U1452_221.122-1.7613.6585.51419.28425.439-6.531-1.0562.0537.276-10.65932.292
137822_A1219C1220:G1263G1264_220.49-1.113.443-5.051-2.52663.259-0.938-0.6993.437-2.4044.80663.485
138022_A1221C1222:G1261U1262_220.719-1.3173.265-4.7036.68430.163-3.64-2.1752.77512.5588.83531.226
138222_A1223A1224:U1259U1260_22-0.093-1.0513.7978.7717.19437.563-3.4221.1292.97324.802-12.6542.073
138322_A1230U1231:U1254U1257_226.160.4681.8066.79313.54652.378-0.052-6.4582.56814.993-7.51954.377
138722_A1234G1245:U1250U1251_222.5111.677-0.57130.143-95.986-4.481-1.3170.638-1.04753.20772.141-161.726
138922_A1236G1237:C1248U1249_221.695-0.8243.8341.54210.52137.333-2.723-2.3373.54716.041-2.35138.766
139122_A1238U1239:C1246U1247_222.211-2.1952.7542.2047.843100.509-1.525-1.4072.665.094-1.432100.75
139822_A1275U1276:A1436C1431_220.523-3.7953.5351.12619.924-21.4870.8591.4125.145-43.2742.445-29.244
141322_A1296G1297:A1300U1301_22-4.583-1.6362.8842.25213.70360.224-2.1154.5572.34213.464-2.21361.658
142422_A1344A1345:U1380U1381_22-0.841-1.2723.2345.2925.26231.948-3.1032.3452.8229.4-9.45532.786
142522_A1345A1348:U1377U1380_221.7912.044.34218.9051.868105.7561.235-0.7724.5541.165-11.794106.941
142622_A1348G1349:C1376U1377_22-0.219-1.6272.797-7.62920.78125.223-5.228-0.5011.17839.29514.42633.441
143522_A1357G1358:C1365U1366_22-0.393-1.8942.9343.15116.78331.951-4.8510.9711.71528.121-5.27936.123
143722_A1388C1389:G1412G1409_22-2.9655.453-3.14-10.379-4.12835.7368.0025.895-2.792-6.53316.42537.387
135722_A1469C1470:G1574G1170_22-0.7620.0612.85-1.504-0.58819.2670.4391.6092.897-1.7534.48419.334
144422_A1471C1472:G1536U1538_221.819-2.3123.342-4.69611.253-69.8051.5711.3933.73-9.758-4.073-70.728
144722_A1475C1476:G1531U1532_221.235-1.553.2951.7183.87142.928-2.487-1.5123.1955.274-2.34143.126
145122_A1479G1480:C1527U1528_220.381-2.0864.15211.13815.84238.35-4.7190.7853.0922.455-15.78842.798
145422_A1487G1488:C1518U1519_220.684-1.4382.352-18.558-8.89924.059-1.442-3.7641.805-17.75337.02531.563
136122_A1556U1560:U1551U1552_223.0973.424-1.19164.28825.034-4.809-1.374-0.738-3.625-13.51488.685-166.197
137122_A1569C1571:G1540G1542_220.564-0.876.096-10.67717.17897.498-1.083-0.6885.86711.3347.04599.05
133922_A1576A1577:U1168G1169_221.41-1.4023.8030.92114.81758.672-2.207-1.3523.41314.863-0.92460.359
134022_A1577U1578:G1167U1168_220.227-1.1082.9497.138-1.17449.171-1.2410.2082.976-1.403-8.52449.668
146422_A1586A1587:U1609G1610_22-0.021-0.4733.088-1.671-0.48759.16-0.455-0.0593.091-0.4931.69259.183
146522_A1587G1588:U1608U1609_22-0.161-1.823.387-1.62217.30335.217-4.6190.0632.28626.6862.50139.149
147022_A1592A1593:U1603U1604_220.941-0.9963.6513.2137.24244.448-2.015-0.9093.5119.484-4.20845.113
147122_A1593G1594:C1602U1603_22-0.947-1.2112.957-0.9348.3330.844-3.5031.5752.57715.3111.71731.936
147422_A1719G1720:A1681U1682_220.645-1.0232.7833.4920.012100.547-0.907-0.3712.62312.918-2.253102.031
147622_A1721A1722:G1679G1680_22-0.31-0.5353.086-2.99215.31828.861-3.3640.0782.51228.2755.52232.732
147722_A1722U1723:A1678G1679_221.446-1.0243.523-2.5512.33660.229-1.141-1.5723.4272.3262.5460.319
148322_A1728C1729:G1672G1673_221.063-0.8793.229-7.9833.68231.573-2.152-3.1712.7676.60714.32732.744
148522_A1730A1731:G1670A1671_220.463-2.1323.2410.387-2.866-23.8995.4253.6322.5516.51323.606-26.184
148622_A1731A1732:U1669G1670_220.455-0.7933.718-0.61310.56558.409-1.402-0.4953.53610.7290.62359.277
148722_A1732C1733:G1668U1669_22-0.222-1.1882.949-2.4766.49335.523-2.710.0532.70610.5174.0136.175
149522_A1740U1741:A1660U1661_221.073-1.152.9370.4885.8731.544-2.998-1.8652.710.681-0.88832.075
149922_A1744G1745:A1655U1656_22-2.025-0.7833.2842.72911.35657.538-1.3732.2073.00411.665-2.80358.612
150122_A1746G1747:C1653G1654_221.823-0.2694.098-7.40314.98260.06-1.101-2.1813.71914.6637.24662.132
150422_A1749A1750:U1650A1651_22-0.54-2.1153.2973.4932.55515.063-9.584.4692.7089.495-12.97915.669
150522_A1750C1751:G1649U1650_220.726-1.1142.9483.0475.69732.402-2.812-0.8212.77210.084-5.39433.022
150822_A1753A1754:C1646U1647_22-2.7830.8261.22490.49151.00963.6490.1131.5720.03276.306-45.725176.64
150922_A1754A1756:G1645C1646_22-2.2823.3862.495-108.722-80.048-7.673-0.983-2.3870.3552.42-71.197-135.118
151022_A1756G1757:C1644G1645_22-0.072-2.3993.461-8.18523.58535.074-5.308-0.6041.59134.29711.90342.823
151522_A1762A1763:C1639C1640_22-1.565-0.8023.573-6.201-1.98846.619-0.821.3853.769-2.4987.79147.047
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155744_C45G46:C57G58_441.003-1.7863.1775.1938.34630.932-4.561-0.9492.74315.175-9.44332.42
155944_C47C62:U55G56_44-1.213-2.3473.33810.2159.62749.959-3.2892.0272.59611.147-11.82851.772
1166844_C115G116:C137G107_44-1.654-3.8732.956-5.193-2.6175.247-17.628-9.1764.371-21.59242.8427.831
1167044_C117C118:G135G136_44-0.929-2.6763.374-2.2476.64820.869-9.3681.6382.49617.725.98822.005
1167144_C118C119:G134G135_44-0.189-1.6813.468-4.0465.04337.213-3.269-0.2473.2247.836.28137.751
1167244_C119C120:G133G134_44-0.363-2.1232.8570.9788.36428.002-5.6250.8842.13316.81-1.96529.217
1167344_C120U121:G132G133_440.491-1.9663.3711.2423.75240.275-3.266-0.573.1965.433-1.79840.461
155144_G39A40:A105A104_44-1.881-2.9384.0978.804-9.968-128.9961.718-0.9584.0385.5164.872-129.364
155444_G42A43:U101U102_44-0.322-2.352.879-7.4673.00329.862-4.91-0.6382.6375.69814.16930.903
155844_G46C47:G56C57_44-0.685-1.2993.357-7.3012.98539.02-2.2670.1323.3234.41410.79639.779
1165844_G49C50:G75C76_44-0.06-1.2813.125-0.396.12733.215-3.1210.0452.85110.6060.67633.762
1165944_G63U64:A96A97_44-0.788-2.5823.701-12.9111.15234.282-5.443-0.5272.86217.63220.41138.178
1166444_G68U69:A89C91_440.796-1.2923.2490.7691.13832.735-2.485-1.283.2212.018-1.36332.763
1166644_G70A71:G87A88_440.598-1.6534.9044.906-3.373-4.38327.61526.1571.75830.40244.229-7.392
1166744_G114C115:G107C108_44-0.227-2.0533.2810.3131.41736.282-3.4910.4083.1992.274-0.50236.31
1166944_G116C117:G136C137_440.33-1.6693.2381.8645.92241.572-2.917-0.2742.9958.287-2.60942.013
1167644_G123G124:C129C130_440.556-1.9343.257-1.0811.88628.398-4.352-1.3723.1013.8372.228.479
1166044_U64A65:C94A96_443.37-2.5762.556-17.118-3.78930.625-3.94-7.0250.904-6.54529.56735.184
1166344_U67G68:C91A92_44-0.316-1.6823.465-3.2872.79732.423-3.492-0.0313.3274.9825.85432.701
1166544_U69G70:A88A89_440.1610.9812.672.26310.35462.8750.551-0.072.7889.851-2.15463.671
1167444_U121U122:A131G132_44-0.374-2.2622.965.42411.45320.498-8.0672.151.37828.891-13.68224.064
1167544_U122G123:C130A131_44-0.727-1.9072.9932.37713.20934.977-4.3811.3872.10821.044-3.78737.388
1331177_A27C28:G52U53_770.303-1.5963.33912.731-0.3234.304-2.51.353.259-0.521-20.72136.525
1328877_A63G65:C15U16_770.184-1.6793.221-4.1115.06928.863-4.297-1.1782.83810.0088.11729.576
1329077_A66G67:U111U14_773.77-1.0883.061-2.242-1.2953.1-1.14-4.3442.935-1.4422.50653.159
1329677_A72C74:C105U106_770.317-1.2584.0281.0893.05761.198-1.411-0.2483.9723.001-1.06861.276
1329977_A76U78:A102A103_772.487-2.2131.427124.86126.308-99.360.7931.5540.975-63.35662.63-178.451
1330177_A79G80:C100G101_77-0.236-1.0853.293-3.9910.7160.586-1.1080.043.290.7033.95260.708
1330677_A84G85:A95U96_77-1.136-0.9692.7934.2375.05124.62-3.353.5412.32511.582-9.71625.475
1328077_C6G7:U114G115_772.263-2.9533.5120.92611.02211.019-17.036-7.820.53945.085-3.78715.601
1331077_C26A27:U53U54_772.675-1.8452.066-21.174-2.43424.566-3.151-6.136-0.01-4.73941.22232.415
1331277_C28C29:G49G52_775.839-0.3453.21820.05-8.77461.8110.137-4.3734.727-8.27-18.89865.208
1331377_C29G30:C47G49_770.032-1.6765.96-31.334.84846.827-4.103-2.3193.53335.31531.71965.285
1331777_C36G37:C44G41_77-1.518-2.2632.49416.4580.976-35.8383.261-0.5462.949-1.49225.171-39.335
1328377_C58U59:A20G21_77-0.067-1.6293.181-3.5913.99335.443-3.19-0.3782.9786.5135.85835.834
1329277_C68C69:G109G110_77-0.784-2.2383.409-9.2549.38630.314-5.504-0.1612.73216.97616.73732.994
1329377_C69U70:A108G109_77-0.337-1.9393.1713.1543.51429.615-4.4231.2562.8766.821-6.1229.981
1329777_C74G75:A104C105_77-2.171-0.4033.27610.9774.40549.713-0.7533.2312.7285.156-12.84851.014
1327577_G1G2:U119C120_77-0.007-2.2712.787-4.2374.65622.424-6.88-1.1222.23811.67910.62923.28
1327677_G2U3:A118U119_770.305-1.7273.2790.1063.41836.063-3.247-0.4773.1095.506-0.17136.22
1327977_G5C6:G115C116_770.407-1.5093.2961.0336.91730.598-4.04-0.5662.90612.896-1.92631.368
1328177_G7G8:C113U114_77-0.753-1.4653.019-1.8161.19244.346-2.0410.8423.0071.5782.40444.396
1328277_G8C9:G112C113_770.683-0.9552.8595.37210.95230.979-3.218-0.4352.4719.579-9.60433.24
1331477_G30U31:A46C47_770.158-2.2183.0160.1352.10330.503-4.58-0.2762.8613.992-0.25730.574
1331877_G37U38:A42C44_77-2.121-1.6534.6999.6128.96956.547-2.3542.8844.0389.328-9.99757.932
1328577_G60G61:C18C19_770.087-1.8723.3-1.8917.92436.57-3.905-0.3712.8412.4382.96937.436
1328677_G61U62:A17C18_77-0.038-1.5943.301-1.633.75132.794-3.427-0.2053.1036.6122.87433.041
1328977_G65A66:U14C15_77-1.098-2.1483.6673.17411.04942.956-3.91.7572.96914.774-4.24444.397
1329177_G67C68:G110U111_770.549-1.2722.91-0.4556.89943.289-2.269-0.7732.6819.2810.61243.812
1329577_G71A72:U106C107_77-0.469-1.2042.962-0.0560.4634.779-2.0780.7772.9470.7690.09434.782
1329877_G75A76:A103A104_772.822-1.121-1.504-83.238-152.068-145.6290.3731.514-1.32876.164-41.69-178.039
1330277_G80U81:G99C100_770.026-1.9883.317-0.3430.73639.994-2.991-0.0773.2811.0760.50240.002
1330477_G82U83:A97C98_770.921-1.4443.4554.2447.52935.34-3.395-0.8683.17712.178-6.86436.349
1330777_G85G87:C94A95_771.012-2.4343.543-4.5710.45428.804-4.94-3.063.3090.9069.11629.16
1330877_G87G88:C93C94_77-0.587-2.1983.354-2.5241.85637.482-3.6550.5773.2762.8823.91937.608
1330977_G88G89:A92C93_77-3.128-1.6842.489-5.35-3.22350.37-1.7793.3412.881-3.7716.25850.73
1327777_U3U4:A117A118_77-0.107-1.4693.414-0.4497.32132.577-3.7680.1123.02312.8480.78733.371
1327877_U4G5:C116A117_77-0.74-1.3773.158-2.91513.88735.244-3.7220.8032.5121.8724.59137.909
1331577_U31U32:A45A46_77-0.152-1.6323.3093.36911.34931.226-4.5930.7842.54820.196-5.99633.343
1331677_U32C36:G41A45_77-2.0862.743.183-1.185-8.011132.1391.5521.1333.106-4.3810.648132.266
1328477_U59G60:C19A20_77-0.216-1.6212.9660.1812.26125.71-4.1890.5282.8145.069-0.40525.808
1328777_U62A63:U16A17_77-0.256-1.092.9611.87321.44629.326-4.1770.6241.76636.766-3.21136.239
1329477_U70G71:C107A108_770.099-1.9023.278-2.1836.15725.943-5.608-0.7452.74413.4454.76626.739
1330077_U78A79:G101A102_775.464-1.6513.545-3.8913.026-11.9182.56218.1755.307-13.826-17.776-12.894
1330377_U81G82:C98G99_77-1.978-2.832.997-5.40813.60112.221-13.0944.1730.47446.78518.60319.047
1330577_U83A84:U96A97_770.061-1.7653.6317.67521.49137.461-4.4080.6452.30930.276-10.81243.651
1224488_A33C32:G331G330_550.8411.985-3.427-1.96-17.703-30.772-5.571.637-1.97430.38-3.364-35.447
1223288_A37G39:A104C106_88-0.3562.3292.348-8.91821.965139.41.1470.1532.51511.6874.745140.303
1223488_A40A41:G103A105_88-0.328-0.0322.98-8.126-1.188121.025-0.0080.122.991-0.6824.665121.191
1223588_A41G42:U102G103_881.007-0.4313.69-11.4796.53855.721-0.843-1.7433.3746.88812.09357.143
1223788_A43A44:U100U101_88-0.507-1.6513.5751.7952.70138.815-2.8270.9943.4314.055-2.69538.945
1223888_A44C45:G58U100_880.517-0.9352.845-5.5051.0437.733-1.544-1.3872.721.5978.45438.131
1332288_A65A66:U93C94_88-0.809-0.6613.226-3.98-1.23851.783-0.6720.6583.289-1.4154.54951.939
1332388_A66U67:A92U93_88-0.427-1.6713.659-1.6257.08335.788-3.720.443.29511.3812.61136.495
1224988_C28U27:A336G335_550.832.245-3.3464.48-4.195-22.992-6.8080.56-3.010.29110.989-23.786
1224788_C30U29:A334G333_550.3172.32-3.475.61-10.609-24.769-7.316-0.62-2.31523.08112.205-27.482
1224588_C32G31:C332G331_550.1391.443-3.0463.788-8.851-34.383-3.486-0.257-2.60714.6216.257-35.667
1223988_C45G46:C57G58_881.063-1.7143.2711.0546.5930.229-4.425-1.7992.87612.447-1.9930.94
1224188_C47C62:U55G56_88-0.843-2.4853.03714.7696.89247.473-3.3591.9012.3348.281-17.74550.039
1332988_C115G116:C137G107_88-1.992-3.7113.301-1.751-3.3563.26-2.2671.8165.345-43.68722.84.995
1333188_C117C118:G135G136_88-1.188-2.2543.084-0.8086.08430.04-5.3212.1082.61811.5861.53830.646
1333288_C118C119:G134G135_88-0.499-2.0183.179-0.2166.07827.689-5.3970.9742.68712.5090.44528.337
1333388_C119C120:G133G134_88-0.065-1.9413.613-4.0717.98332.689-4.668-0.573.05413.8627.06933.863
1333488_C120U121:G132G133_88-0.09-2.223.1585.1435.78136.644-4.1540.7582.7519.071-8.06937.424
1224688_G31C30:G333C332_550.1091.525-3.607-4.346-13.487-32.667-4.50.824-2.74922.694-7.314-35.531
1223388_G39A40:A105A104_88-2.285-3.3683.93315.455-13.312-129.5641.972-1.1233.8817.348.522-130.415
1223688_G42A43:U101U102_88-0.645-2.4743.33-6.84610.03630.503-5.9810.0542.49718.19412.41232.78
1224088_G46C47:G56C57_88-0.845-1.4923.202-6.6590.59140.05-2.2170.4793.2730.8569.64140.582
1331988_G49C50:G75C76_880.118-1.0162.9010.3075.79233.894-2.5-0.1582.6979.845-0.52234.372
1332088_G63U64:A96A97_88-0.836-2.7873.582-11.3511.05630.266-6.517-0.3832.5819.57820.134.077
1332588_G68U69:A89C91_880.596-1.5363.224-2.8264.99831.842-3.591-1.5412.8949.0185.09932.342
1332788_G70A71:G87A88_88-0.115-2.1694.8282.71-7.137-5.92129.7855.7341.39348.85418.551-9.659
1332888_G114C115:G107C108_88-0.105-1.7453.157-2.9582.94542.385-2.684-0.1393.0354.0624.0842.581
1333088_G116C117:G136C137_880.679-1.5893.135-1.4016.88340.01-2.992-1.1222.8119.9662.02840.597
1333788_G123G124:C129C130_880.086-1.593.4425.20811.32734.147-4.1090.5772.77518.541-8.52436.287
1225185_U26C339:G25G337_850.5383.3251.074-156.21879.561-33.615-1.7310.137-0.675-40.537-79.594-175.512
1225088_U27U26:G337A336_55-0.1591.477-2.689-4.547-6.473-30.539-3.6590.368-2.33312.037-8.456-31.524
1224888_U29C28:G335A334_55-0.6611.689-3.143-4.0080.012-35.97-2.718-0.516-3.196-0.02-6.465-36.186
1332188_U64A65:C94A96_883.779-1.9993.332-15.7681.3530.703-3.53-8.191.2152.36227.59934.454
1332488_U67G68:C91A92_88-0.089-1.5523.331-0.6483.69737.914-2.8450.0543.1725.6740.99438.092
1332688_U69G70:A88A89_880.3471.1562.5943.0048.79562.110.787-0.2232.7318.473-2.89462.733
1333588_U121U122:A131G132_880.482-2.2412.84.3457.34724.214-6.647-0.1412.09316.857-9.96925.653
1333688_U122G123:C130A131_88-0.229-1.9522.7940.55210.23323.748-6.4570.6241.80523.513-1.26925.835

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.