A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 5DOY  PDB ID: 5DOY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17361A1A_4OC1920G1921:C1909G1910_1A1A-0.166-2.563.1145.204-7.22820.596-3.6982.5063.642-19.105-13.75522.42
17421A1A_5MC1942U1943:A1936U1940_1A1A-3.033-0.7910.76-46.171163.46570.973-0.7071.4330.49483.77423.662171.747
111A1A_A6G7:C2896U2897_1A1A1.123-1.9643.97815.44421.10827.194-6.1450.5192.27536.041-26.36937.558
131A1A_A8U9:A2629U2895_1A1A0.461-2.4843.339-7.515-7.829-52.1073.2660.0452.9988.804-8.451-53.148
1111A1A_A21C22:G518U519_1A1A0.791-1.162.973-1.1775.534.557-2.657-1.472.7349.1831.96534.998
1181A1A_A28U29:U511G512_1A1A-0.7470.053.101-0.42419.01847.796-1.20.8352.92922.4640.50151.235
1281A1A_A38C39:G440U441_1A1A-0.234-0.982.948-1.8765.45730.257-2.7820.122.74210.3373.55430.789
1331A1A_A43G44:C433U434_1A1A0.04-0.9482.970.66910.52127.776-3.7520.0422.45620.984-1.33429.673
1641A1A_A49G177:A149U120_1A1A3.1890.928-0.831.533172.313-20.5140.5251.415-1.606-88.10716.124-175.251
1511A1A_A64C65:G89U90_1A1A2.01-0.182.962-5.17-1.509-17.5731.3913.4623.384.794-16.428-18.374
1741A1A_A78G79:C107U108_1A1A0.003-1.7173.1934.23114.0734.346-4.3290.492.32222.589-6.79337.269
1631A1A_A118A49:U120G51_1A1A4.0581.8670.621-57.82-142.666162.6110.96-2.0410.134-71.46728.965176.093
1621A1A_A119A118:G51A52_1A1A2.857-3.314-3.95464.542148.067-116.8592.481.078-2.397-75.2732.81-170.356
1431A1A_A190A191:A204U206_1A1A0.7251.3193.1945.1562.935-95.373-0.940.5773.13-1.9833.483-95.513
1441A1A_A191C192:C203A204_1A1A-0.93-1.7173.2472.179-0.83117.871-0.9940.5653.244-0.484-1.272117.885
11101A1A_A221G266:C426U427_1A1A1.895-2.3864.233-9.78610.95286.165-2.026-1.6383.7827.9687.11987.165
1921A1A_A222G224:C231G232_1A1A0.420.9543.241-2.56.84555.2490.623-0.5953.3087.3452.68255.69
1941A1A_A225G226:A228U230_1A1A1.0630.8362.584-3.05114.8328.857-0.683-2.3462.57627.4995.65732.513
11081A1A_A233G220:A428A429_1A1A-0.087-3.705-1.77297.235-122.213-18.4660.243-1.357-3.09668.91154.827-156.488
1951A1A_A251G252:C246G247_1A1A2.233-1.5292.9032.7114.9846.294-2.3-2.6212.8526.306-3.43346.62
1991A1A_A255A256:A241U243_1A1A1.3331.1473.4487.5591.855-87.372-0.8691.1313.328-1.345.463-87.649
11001A1A_A256A257:G240A241_1A1A-0.252-1.3823.322-4.104-4.403119.352-0.7570.1053.356-2.5492.376119.444
11011A1A_A257G258:U239G240_1A1A0.343-0.6493.528-4.8724.42758.785-0.899-0.6133.444.4954.94659.119
11061A1A_A262G430:C234U235_1A1A1.0732.5713.249159.925-75.6159.671.9530.8740.146-38.414-81.245176.911
11151A1A_A270A271:G271XU271Y_1A1A3.887-0.2222.786-10.6459.6339.284-2.906-15.473-1.02438.43142.46817.084
11571A1A_A278C279:G361U362_1A1A-1.311-2.3942.89-9.97711.16714.825-10.1870.3481.39733.95330.33621.042
11611A1A_A282U284:A357U358_1A1A2.367-2.0243.0715.507-3.85884.938-1.41-1.6263.263-2.853-4.07285.153
11671A1A_A289G290:U350G351_1A1A0.108-1.03.142-7.6191.61151.152-1.251-0.6163.0671.8548.76651.702
11721A1A_A294G295:C343G344_1A1A4.018-1.7214.472-14.06517.69557.133-2.685-4.7422.90517.75614.11461.09
11771A1A_A322A299:G338U339_1A1A-3.409-1.6963.6588.266-1.992-54.6181.968-3.1014.0352.1568.948-55.226
11251A1A_A363AG363B:C272HU272I_1A1A-1.577-1.3853.48511.61912.29132.933-3.7173.9382.1920.114-19.01436.915
11941A1A_A374C375:G399G400_1A1A0.496-0.673.455-3.974.50966.52-0.794-0.6153.3784.1023.61266.76
12041A1A_A401A402:A423A422_1A1A0.420.5473.2994.7651.06642.390.643-0.093.3371.468-6.56342.657
1241A1A_A454G35:C445G446_1A1A-1.785-2.219-0.57128.75-108.0367.478-1.2810.6990.022-57.601-68.645168.098
12051A1A_A457U459:A470A471_1A1A2.622-1.9241.222119.591127.19-86.930.6841.5730.555-64.2160.374-176.069
12071A1A_A460C461:G468G469_1A1A0.178-0.5763.095-2.9725.98260.669-0.835-0.3093.0215.9032.93261.0
12091A1A_A492G493:C487G488_1A1A0.96-0.9632.842.5594.01951.849-1.329-0.9472.8054.586-2.9252.052
12141A1A_A497G498:G506A482_1A1A-1.371-0.9723.976-2.027.7498.321-0.7930.8653.9335.1091.33398.562
11881A1A_A501A505:A480A477_1A1A-0.381-0.3466.466-1.6536.019113.699-0.3390.1916.4543.5930.987113.81
11901A1A_A503C509:G481A479_1A1A1.5-2.872-5.488-166.25720.38879.021-1.1421.682-4.91910.4785.376170.366
11891A1A_A505A503:A479A480_1A1A0.5380.0693.098-5.555-3.33132.2580.059-0.333.085-1.8213.037132.339
12151A1A_A529G2023:C2040U2041_1A1A1.375-2.1513.273-3.7720.50578.236-1.717-1.1933.2030.42.98878.314
12251A1A_A536C537:G556U557_1A1A-0.036-1.1383.2082.816.09933.022-2.9080.4982.94410.594-4.88133.68
12331A1A_A575U576:C565U566_1A1A-0.99-2.0933.374-12.7543.81836.651-3.629-0.1463.35.8419.50938.916
12361A1A_A578G2018:C531G563_1A1A0.763-4.4973.548-2.04313.141-0.61-14.254-1.9394.719-86.348-13.423-13.313
12391A1A_A586A1254:G585C1251_1A1A0.477-2.772-0.319167.214-42.417-80.0281.308-0.077-1.08121.53784.901-174.265
12571A1A_A590C591:G666U667_1A1A0.115-0.7593.0862.72610.71431.797-2.9070.2062.69718.857-4.79733.617
12721A1A_A609G610:C618G619_1A1A1.142-0.5213.757-4.9615.89261.554-0.814-1.3673.6075.7334.82761.987
12771A1A_A637G638:C650G651_1A1A-2.198-3.6843.13485.812-121.303102.972-0.9311.7783.544-63.343-44.81160.59
12851A1A_A675A676:A802U803_1A1A0.021-1.3882.9283.924-7.06242.52-1.2410.3283.099-9.633-5.35343.245
12861A1A_A676A677:A800A802_1A1A5.6940.2254.23-14.96519.137-66.601-1.1854.1655.044-16.863-13.186-70.41
12871A1A_A677C678:G799A800_1A1A0.405-1.3033.017-3.63-6.567120.437-0.693-0.2653.051-3.7812.09120.577
12951A1A_A689G690:C772U773_1A1A0.192-1.4283.2873.00212.23929.876-4.5640.1462.52922.521-5.52332.369
13041A1A_A718C719:G712G713_1A1A1.966-1.3563.165-4.4126.09167.01-1.442-1.9312.9285.4993.98367.382
13081A1A_A722G723:C708U709_1A1A0.228-1.3663.4173.6874.45235.025-2.9090.1783.2317.335-6.07535.484
13131A1A_A727G728:U703G704_1A1A-1.0890.2632.555-0.42416.00945.938-0.6681.32.51919.8160.52448.506
13191A1A_A735C736:G760A761_1A1A1.121-1.4193.293-1.7085.52961.671-1.631-1.1683.1395.3811.66261.915
13351A1A_A777G778:C786U787_1A1A-0.276-2.1093.3190.062-1.78830.163-3.6710.5423.435-3.433-0.11930.214
13421A1A_A835G836:U943U822_1A1A2.867-1.1232.725-10.5619.66250.572-1.729-3.7461.90211.05812.08752.43
13481A1A_A841G842:C936U937_1A1A0.153-1.5273.067-1.4629.35826.275-5.083-0.6172.38119.7873.09127.902
13531A1A_A849C850:G927G928_1A1A0.066-0.7563.599-3.42910.5663.983-1.185-0.2173.4439.8873.21164.838
13651A1A_A861G862:C915G916_1A1A0.187-0.6833.423-2.568-0.04662.561-0.655-0.3013.415-0.0442.47262.609
13671A1A_A863G864:C912U913_1A1A0.044-1.4763.564.67112.59533.299-4.2320.6082.81720.95-7.7735.835
13781A1A_A900G879:A899U877_1A1A-1.5683.6623.484-162.12320.327-145.863-1.89-1.2452.748-10.208-81.42-175.141
13771A1A_A901A900:U877C876_1A1A-1.1971.906-3.5546.877-7.442-44.307-3.139-2.17-3.0059.7178.979-45.394
13691A1A_A909C908:G869U868_1A1A1.1161.822-2.5240.034-11.478-26.728-5.3012.221-1.62123.50.07-29.047
13961A1A_A973U1188:A819A820_1A1A2.321-2.5541.006119.402124.719-54.4140.9091.5170.674-63.79761.077-173.474
14231A1A_A1028G1030:C1124A1126_1A1A-0.5221.4587.07-8.5610.122-3.769-24.367-17.6410.543-56.657-47.913-13.779
14261A1A_A1032G1034:C1121G1122_1A1A-1.321-3.3463.531.1623.48136.078-5.8762.2893.1615.603-1.87136.258
14371A1A_A1048A1050:C1109G1110_1A1A-0.883-1.6844.765-19.38628.5776.571-2.284-0.024.14422.04114.95682.893
14471A1A_A1054G1055:C1104U1105_1A1A-0.074-0.2013.247-3.2712.5738.465-0.617-0.2873.2233.8874.94738.681
14401A1A_A1077C1079:G1059G1062_1A1A-3.294-3.0435.94924.145-3.126-11.9978.3897.615.2288.23763.622-27.102
14571A1A_A1142AG1144:C1018U1019_1A1A-2.451-2.698-1.06287.975-146.788-24.6220.55-1.71-1.25676.38545.78-171.337
14621A1A_A1148G1149:C1013U1014_1A1A0.948-2.5483.23810.99211.85924.412-7.330.2332.04724.859-23.04329.214
14691A1A_A1155G1157:C998U999_1A1A2.048-2.7932.989-3.606-4.03570.22-2.292-1.8933.031-3.5023.1370.401
13981A1A_A1189G1190:C817G818_1A1A1.041-1.1663.2362.2047.31758.188-1.561-0.9513.1167.488-2.25558.644
14031A1A_A1194G1195:C812U813_1A1A0.817-2.1283.1964.7644.1824.377-6.044-0.552.99.691-11.04525.176
14131A1A_A1204G1206:U1240A1241_1A1A-0.5795.526-0.814-86.301-141.298119.7412.3430.55-2.908-71.47443.654172.771
14851A1A_A1213A1214:G1235G1236_1A1A-0.4030.2732.816-9.5676.14532.892-0.377-0.6242.82410.4716.30134.751
14861A1A_A1214G1215:U1234G1235_1A1A0.066-0.9813.419-7.11110.08452.777-1.712-0.5193.16311.1717.87854.099
12401A1A_A1254G1256:C584G585_1A1A1.632-0.7233.803-8.08518.4153.951-1.863-2.1893.1719.5468.58457.311
12471A1A_A1262U1263:U2016U2017_1A1A-0.545-0.9243.423-1.0859.38849.115-1.7920.5643.21711.1741.29149.961
12501A1A_A1265U2613:A2013A2014_1A1A3.6882.212-3.2675.7167.194136.811.232-2.016-3.1383.867-3.073136.956
16301A1A_A1268A1269:U2011G2012_1A1A0.066-0.8483.223-6.2045.06757.688-1.132-0.3873.1235.2246.39658.194
16311A1A_A1269C1270:G2010U2011_1A1A-0.378-1.5623.42-2.4639.69236.004-3.710.2692.93515.3193.89437.323
14961A1A_A1286C1289:G1281U1282_1A1A1.377-1.8093.052-0.4130.51980.89-1.407-1.0713.0360.40.31880.892
15211A1A_A1301G1303:C1625G1626_1A1A-3.194-0.396-0.66669.44-150.71-60.0350.158-1.6250.50978.53436.185-167.831
15251A1A_A1308G1309:C1605A1608_1A1A4.087-2.8152.59626.44120.452-18.5692.9138.068-0.03-37.7848.845-38.11
15151A1A_A1317C1318:G1334U1335_1A1A0.737-1.2743.3394.19211.05335.1-3.465-0.612.88717.717-6.7236.978
15291A1A_A1342C1345:G1601U1602_1A1A1.124-1.2632.768-10.4692.97879.873-1.042-1.0952.592.318.1280.488
15361A1A_A1354G1355:C1376G1377_1A1A1.4770.0473.649-9.02810.73463.037-0.455-1.8053.410.1338.52364.421
15411A1A_A1359A1360:G1371U1372_1A1A-0.663-2.9754.042129.39-98.826114.78-0.7741.2734.1-50.226-65.759170.763
15421A1A_A1360G1361:C1370G1371_1A1A1.196-0.7583.839-1.32812.17261.144-1.375-1.2273.62111.8381.29262.241
15461A1A_A1395C1398:G1389U1390_1A1A1.792-1.8633.2511.758-5.02180.131-1.311-1.3433.375-3.896-1.36480.278
15611A1A_A1412G1413:C1589U1590_1A1A0.177-1.4962.955-2.5952.91330.577-3.314-0.7772.785.4954.89630.819
15671A1A_A1419G1421:C1577U1578_1A1A2.49-1.1693.174-9.291-1.062.925-1.069-2.742.836-0.9528.84963.545
15741A1A_A1427C1428:A1570A1571_1A1A-2.9531.652-3.088-89.698-153.31828.686-0.4442.22-0.702-77.42945.299177.704
15981A1A_A1452C2703:G1456A1457_1A1A0.704-5.1832.377-4.5815.31117.245-3.071-0.4452.2123.1082.681117.376
16241A1A_A1486G1487:C1502U1503_1A1A-0.694-1.1783.046-3.83913.8228.768-4.290.6572.32325.8837.18932.078
16161A1A_A1528A1528A:G1541A1542_1A1A-0.701-0.4733.438-1.10111.245114.87-0.4070.4023.4066.6630.653115.225
16171A1A_A1528AG1529:U1540G1541_1A1A0.4240.0643.629-16.4269.54858.798-0.432-1.2663.3899.45916.27461.529
15881A1A_A1553G1555:C1437U1438_1A1A2.795-2.0193.201-1.945-0.93779.382-1.555-2.2383.163-0.7331.52379.407
15921A1A_A1558G1560:U1433A1434_1A1A-4.0741.6714.229-119.443-115.707-52.0510.143-3.0640.28460.521-62.475-167.693
15951A1A_A1562G1563:C1430U1431_1A1A-0.041-1.1493.294-0.5936.75831.5-3.242-0.032.98912.2711.07632.204
16361A1A_A1655C1656:G2004A2005_1A1A0.491-0.8423.29-1.3976.89164.853-1.066-0.5133.1866.4061.29965.191
16441A1A_A1664A1665:U1995C1996_1A1A0.246-0.9372.989-5.216-3.357124.659-0.503-0.1792.996-1.8952.944124.747
16451A1A_A1665G1666:C1994U1995_1A1A0.954-2.0483.3974.079.43725.432-6.549-1.0552.60320.405-8.80127.398
16471A1A_A1669U1991:A1668U1993_1A1A0.144-3.519-3.35-164.786-36.904-18.1461.3461.953-1.15219.476-86.965-169.008
16631A1A_A1689A1690:G1697A1698_1A1A-0.436-2.5353.1153.415-8.711112.248-1.4270.33.231-5.241-2.055112.504
16641A1A_A1690C1691:G1696G1697_1A1A1.284-1.0013.227-0.64910.79659.802-1.493-1.3013.01110.7330.64560.683
16661A1A_A1741G1742:U1720G1721_1A1A-0.686-0.1772.687-2.2553.53756.309-0.3510.6212.6963.7422.38656.452
16761A1A_A1749G1750:C1708U1709_1A1A0.932-1.9173.5152.33510.51825.488-6.506-1.3972.60722.596-5.01627.637
16791A1A_A1773A1829:U1693A1977_1A1A3.567-0.356-1.685116.535121.66775.24-0.006-1.9540.71662.45-59.815170.876
16871A1A_A1783G2588:C2606G2607_1A1A-1.829-4.3413.1794.38117.345-44.9213.634-1.8164.615-21.715.484-48.18
16951A1A_A1791G1792:C1827G1828_1A1A0.731-0.3594.843-19.08828.90459.431-1.933-1.7183.96926.84717.72967.983
17041A1A_A1802A1803:G1814A1815_1A1A-0.1560.1883.013-5.261.687117.5850.0940.0423.0180.9863.074117.665
17051A1A_A1803C1804:G1813G1814_1A1A0.032-0.5393.914-12.2918.72364.174-1.34-0.593.617.08711.21667.573
16801A1A_A1829C1830:G1975U1693_1A1A5.268-0.9933.8384.0937.60282.526-0.972-3.863.9625.75-3.09582.896
17231A1A_A1854G1855:C1887G1888_1A1A0.451-1.2233.664-3.07115.26559.837-1.963-0.5953.27115.0283.02461.648
17281A1A_A1859G1860:C1882G1883_1A1A1.974-0.6633.5182.257-2.73456.492-0.533-1.9443.614-2.886-2.38256.594
17091A1A_A1890G1891:U1851C1852_1A1A0.676-1.1823.237-10.3618.74653.041-1.787-1.3292.8569.61611.39254.624
17181A1A_A1901C1902:G1840U1841_1A1A-0.316-2.0683.455-2.0140.68642.137-2.9470.223.4340.9532.79942.188
17351A1A_A19194OC1920:G1910PSU1911_1A1A2.266-2.6844.088-17.306-2.90154.639-2.617-3.4853.414-3.07318.33157.18
12381A1A_A2019A2020:U2034G2035_1A1A0.502-2.0992.385-8.20216.39422.478-6.044-1.9280.54635.43417.72728.93
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131392a2a_G1089U1090:U1095C1096_2a2a-0.34-1.3632.388-13.9731.97232.837-2.437-0.9482.2613.30423.41635.664
131472a2a_G1120U1121:A1152C1153_2a2a-0.041-1.4773.0492.2641.89239.81-2.3650.3012.9722.773-3.31939.915
131512a2a_G1124C1145:G1127C1149_2a2a1.048-5.8041.932-64.875-140.346-177.7792.9180.5171.84170.175-32.439-179.512
131562a2a_G1133G1134:C1140C1141_2a2a-0.01-2.4213.143-8.22613.41425.343-6.929-1.3381.61427.45716.83929.763
131572a2a_G1134U1135:G1138C1140_2a2a-0.749-1.3123.1581.1942.449110.267-0.8280.473.1321.492-0.727110.289
131542a2a_G1143C1132:G1142C1129_2a2a-2.308-3.206-5.209135.778-93.192155.706-1.9120.706-5.113-46.692-68.029176.786
131532a2a_G1144G1143:C1129C1128_2a2a-0.3171.586-3.2934.557-12.005-22.652-6.441-1.81-2.09727.8710.58-25.997
131592a2a_G1160C1161:G1175A1176_2a2a0.47-2.3973.445-0.5494.78538.621-4.184-0.7733.1317.20.82738.908
131632a2a_G1164C1165:G1171C1172_2a2a-0.299-1.1083.201-8.088-0.7822.14-2.451-1.9833.148-1.94820.20623.566
130732a2a_G1231U1232:A949U950_2a2a0.049-1.3433.21-2.5086.17938.623-2.706-0.3582.969.2573.75839.173
130752a2a_G1233C1234:G947C948_2a2a-0.495-1.512.988-1.9752.79529.266-3.5040.5952.8615.5073.89229.461
131652a2a_G1241C1242:G1295C1296_2a2a-0.513-1.6153.245-2.3110.97335.96-3.8290.5162.68217.2633.63537.612
131722a2a_G1253C1254:G1283C1284_2a2a-0.256-1.5073.012-2.1780.79933.817-2.7030.1182.9861.3723.73833.894
131742a2a_G1258C1259:G1276C1277_2a2a0.123-1.3023.3561.1978.65328.916-4.2090.0012.85816.849-2.3330.179
130832a2a_G1323A1324:U1313C1314_2a2a-0.049-0.783.445-0.5890.55739.408-1.225-0.0013.4340.8260.87339.416
130642a2a_G1343C1344:G939C940_2a2a-0.27-1.1532.9284.1783.65635.21-2.3480.9712.755.997-6.85435.631
131862a2a_G1353C1354:G1368C1369_2a2a-0.677-1.8733.64-2.759-5.36636.336-2.1190.6363.907-8.5324.38836.817
131882a2a_G1355G1356:C1366C1367_2a2a0.116-1.1153.1572.488-5.62441.779-0.9770.0923.275-7.835-3.46542.209
131892a2a_G1356A1357:G1365C1366_2a2a-1.288-1.4092.8476.436-2.4429.079-2.3053.6312.615-4.776-12.59729.866
131922a2a_G14055MC1404:G1497C1496_2a2a0.5171.177-2.7030.491-8.741-19.237-5.9611.255-1.99424.5771.38-21.118
131992a2a_G1410C1411:G1489C1490_2a2a-0.112-1.2623.2450.6544.75236.967-2.5850.2593.0627.456-1.02737.266
132042a2a_G1415G1416:C1484U1485_2a2a-0.244-1.5273.537-3.5695.14839.908-2.825-0.073.3327.4865.19140.376
132052a2a_G1416G1417:A1483C1484_2a2a-1.676-0.6623.3841.0611.63859.548-1.2291.7133.1911.597-1.05660.58
132062a2a_G1417A1418:G1482A1483_2a2a-0.040.033.4335.7934.951-18.598-2.4912.7023.185-14.55217.027-20.086
132082a2a_G1419C1420:G1480U1481_2a2a-0.218-1.3483.211-4.7842.25741.007-2.145-0.1923.143.2066.79441.332
132102a2a_G1421G1422:C1478C1479_2a2a-0.478-1.883.0913.296.5928.028-5.031.592.52113.318-6.6528.961
132112a2a_G1422G1423:C1477C1478_2a2a-0.08-2.1053.1660.2447.86929.222-5.4470.1972.52515.252-0.47330.242
132122a2a_G1423C1424:G1476C1477_2a2a0.291-1.52.98-2.6494.97229.133-3.84-1.0542.6579.775.20529.661
132212a2a_G1432A1434:G1467A1468_2a2a-1.508-0.5895.06515.22911.1832.268-8.31913.464-0.94749.254-67.07519.028
132232a2a_G1435U1436:C1465C1466_2a2a-2.437-0.7982.883-2.53210.23428.92-3.2574.1632.65319.6854.8730.743
132262a2a_G1438C1439:G1462C1463_2a2a-0.621-1.5443.178-3.3986.77437.906-3.1190.5452.91210.3025.16838.629
132282a2a_G1443C1444:G1458C1459_2a2a-0.594-1.6973.3412.713-7.43729.926-1.6321.6793.582-14.093-5.14230.932
131972a2a_G1504G1505:A1502C1399_2a2a-4.230.8821.20727.611-143.82571.1340.6052.205-0.61-78.62-15.093152.845
132312a2a_G1508C1509:G1526C1527_2a2a0.812-1.4913.14-0.3195.6635.737-3.138-1.352.8719.1530.51536.169
132342a2a_G1511U1512:G1523C1524_2a2a0.214-1.0323.319-0.05520.20546.241-2.61-0.2562.67824.4070.06750.239
127352a2a_U12A914:G21G22_2a2a-1.649-3.4022.725-5.1546.4414.461-28.194.185-0.13348.13138.5179.377
127372a2a_U13G916:C19U20_2a2a1.57-3.0664.022-11.4646.77774.447-2.743-1.6863.5365.5599.40375.459
127562a2a_U49C47:G361U365_2a2a-0.281-2.6663.443-0.169-7.646-115.1771.662-0.1683.3274.526-0.1-115.339
127612a2a_U56G57:C355A356_2a2a-0.793-1.6692.649-9.9468.38327.032-4.583-0.0712.19616.75719.88129.946
127652a2a_U62C63:G104G105_2a2a-0.409-2.012.809-3.0735.31618.491-7.9920.0242.18815.9839.23819.475
127812a2a_U114G115:C312A313_2a2a-0.559-1.2282.954.32914.17336.397-3.2341.2612.25821.622-6.60439.204
127952a2a_U125G126:C235G236_2a2a1.267-1.7153.0575.6599.02621.472-6.718-1.4352.40322.527-14.12423.942
127992a2a_U129C131:G231G232_2a2a-0.527-2.2392.5814.3893.16238.474-3.6581.1962.3254.77-6.6238.838
128062a2a_U189KG189L:C188G189_2a2a-0.599-1.6632.889-0.5924.99124.948-4.9761.2172.52711.4041.35325.442
128082a2a_U190G191:C186C187_2a2a1.585-1.3042.975-6.21913.98734.102-3.516-3.1351.99822.49810.00337.287
128102a2a_U192C193:G184A185_2a2a0.239-1.6093.403-2.42714.09934.478-4.295-0.682.55322.6183.89337.245
128422a2a_U249U252:A274G275_2a2a1.897-0.1656.96221.466-107.6422.9864.151-0.3012.197-80.439-16.042111.368
128432a2a_U252U253:A273A274_2a2a-0.624-1.0113.479-12.70324.77137.587-3.419-0.3052.48633.43117.14446.472
128442a2a_U253G254:C272A273_2a2a-0.354-1.6763.7593.50512.41535.266-4.3371.0392.97419.696-5.56137.481
128472a2a_U256G257:C269A270_2a2a0.044-1.1962.897-2.45614.17837.277-3.105-0.2982.30321.2373.67839.866
128522a2a_U294C295:G302A303_2a2a-0.049-1.3893.168-3.8219.28937.023-3.187-0.3662.74514.3085.88638.315
128662a2a_U340C341:G348A349_2a2a0.59-1.4893.065.2191.22229.286-3.14-0.1193.0542.392-10.21529.762
128732a2a_U387A389:U375G376_2a2a-1.765-0.9973.1836.55610.67835.409-2.793.5072.43916.917-10.38537.493
128882a2a_U404U405:A499U498_2a2a0.215-1.5912.7634.86910.37227.594-4.7440.3592.05220.653-9.69629.835
128982a2a_U434C435:G407A408_2a2a0.706-0.8083.209-1.234.31134.576-1.979-1.3593.0637.2162.05934.857
129012a2a_U437G438:A496A495_2a2a1.068-0.7582.8387.9064.32110.361-7.1822.872.5219.714-36.07213.722
129262a2a_U512C513:G538A539_2a2a-0.457-1.743.4951.36715.34633.22-4.8060.912.46125.223-2.24636.527
127252a2a_U551U552:A32A33_2a2a-0.007-0.8873.208-4.770.02136.815-1.396-0.6143.1840.0337.51437.112
127262a2a_U552A553:U30A32_2a2a0.732-1.263.2021.20918.63732.223-4.195-1.0072.19930.585-1.98437.119
130042a2a_U603G604:C634G635_2a2a-0.431-1.953.7263.58417.47124.509-7.1071.5171.87335.729-7.32930.231
130062a2a_U605G606:A632G633_2a2a-0.093-0.7633.195-0.2652.27451.827-1.0210.0893.1612.6010.30351.874
129622a2a_U646C647:G592G593_2a2a-0.238-1.7233.283-2.1725.68926.095-5.122-0.0212.8612.3854.72926.784
129732a2a_U659G660:C745A746_2a2a-0.39-1.6653.2742.4919.6936.727-3.710.8952.73315.039-3.86638.02
129822a2a_U669G670:C736A737_2a2a-0.078-1.612.8321.41312.526.88-5.1580.3791.90425.211-2.84929.629
129852a2a_U672G673:C717G734_2a2a-1.337-2.1833.95912.37520.68524.684-6.6364.0231.09738.589-23.08634.369
129902a2a_U677U678:A712G713_2a2a0.008-0.8123.339-3.828.28536.543-2.331-0.5073.07312.9655.97837.627
129912a2a_U678C679:G711A712_2a2a0.542-1.0532.8830.0743.24829.389-2.66-1.0482.7556.377-0.14629.564
129992a2a_U686A687:G703A704_2a2a4.5270.6363.8220.971-39.593-5.7851.9737.379-1.04173.36438.859-45.157
129512a2a_U757G758:A583G584_2a2a-0.223-0.8013.2068.4972.2349.882-1.0910.8453.0952.62-9.98650.601
130252a2a_U772G773:C806A807_2a2a0.918-1.5623.2721.24920.15726.225-5.678-1.4351.71138.059-2.35832.992
129472a2a_U820G570:C866A873_2a2a-3.453-2.7290.39715.714-164.4340.4040.0181.8742.389-89.566-8.559165.183
130372a2a_U850G851:U835G836_2a2a0.434-3.1162.474-2.7029.16414.087-13.297-2.2820.31332.8769.69317.007
130532a2a_U891A892:G906A907_2a2a5.19-0.8733.4042.6128.479-13.204-2.97420.6552.445-32.50510.011-15.897
127422a2a_U920U921:A1396G15_2a2a0.71-1.6692.7034.0268.77522.897-5.878-0.7372.02820.949-9.61224.824
127432a2a_U921G922:C1395A1396_2a2a0.825-1.6953.1584.20218.0334.233-4.453-0.7992.12228.22-6.57638.786
130672a2a_U960A1225:U955U956_2a2a-3.47-2.0341.35166.201-159.115147.677-0.8341.8121.449-79.697-33.159177.869
130792a2a_U961C962:G973A1201_2a2a0.952-4.433.6244.5250.805-25.8999.4983.4343.543-1.7799.995-26.297
131132a2a_U997G998:C1043A1044_2a2a0.073-1.5813.083-12.86611.13132.94-3.798-1.6232.2718.19821.03436.966
131162a2a_U1000A1001:U1040A1041_2a2a0.214-1.5363.0282.27323.74432.753-4.347-0.1071.60936.669-3.51140.325
131022a2a_U1052A1055:U1205G1206_2a2a0.403-2.583.2312.17610.42620.486-9.405-0.3931.75827.079-5.65123.063
131042a2a_U1056G1057:C1203A1204_2a2a-0.289-2.1974.763-6.7688.84130.136-6.161-1.1513.94916.3212.49332.082
131102a2a_U1062C1063:G1193U1194_2a2a-0.713-1.7713.30211.3562.40230.171-3.5913.2052.7184.414-20.8732.278
131292a2a_U1070C1071:G1104A1105_2a2a-0.432-1.6883.67-6.9448.24338.837-3.465-0.2253.28612.11510.20640.249
131322a2a_U1073G1074:U1083A1102_2a2a1.321-1.0693.361-5.95917.6243.36-2.718-2.1222.57322.6467.65847.004
131362a2a_U1086G1087:C1098G1099_2a2a0.422-1.9914.265-10.924.00737.224-3.598-2.2993.7736.09716.61738.938
131482a2a_U1121U1122:A1151A1152_2a2a0.513-1.3423.2750.77214.17834.299-3.879-0.7112.55222.864-1.24537.04
131492a2a_U1122A1123:U1150A1151_2a2a-0.087-1.4972.809-0.24729.46420.444-5.1460.1190.40555.9820.46935.733
130742a2a_U1232G1233:C948A949_2a2a1.183-2.3343.3466.2727.25627.237-6.261-1.0132.83914.837-12.82428.847
130772a2a_U1235A1236:G945A946_2a2a0.721-2.3953.13212.9831.21832.154-4.2090.7663.0952.095-22.32834.633
130622a2a_U1341C1342:G941G942_2a2a-0.966-2.4014.042.9596.58713.268-14.7356.1912.32226.127-11.73715.098
131812a2a_U1348A1346:A1375A1374_2a2a-2.1281.4280.114-114.915-123.248167.0330.721.0590.159-61.65157.483178.705
131842a2a_U1351C1352:G1370G1371_2a2a0.372-2.2132.9034.92610.12728.653-5.7340.0572.05419.536-9.50330.743
132032a2a_U1414G1415:U1485G1486_2a2a0.203-2.0983.731-9.1910.90125.302-6.618-2.4522.42622.72919.16128.986
132142a2a_U1425C1426:G1474G1475_2a2a-0.292-1.9463.1742.418.50523.089-6.7861.3162.2820.319-5.75724.702
132162a2a_U1427A1428:U1472A1473_2a2a0.079-1.3993.1-6.849.78330.354-4.001-1.1942.46817.8412.47432.566
132242a2a_U1436C1437:G1464C1465_2a2a2.411-1.4523.148-6.6764.76234.416-3.0-4.8232.4367.9111.08835.351
132332a2a_U1510G1511:C1524G1525_2a2a-0.679-0.7923.036-0.13419.24421.347-5.2681.3461.74942.470.29628.666
132352a2a_U1512A1513:U1522G1523_2a2a0.14-2.012.5530.8659.65322.599-6.685-0.1531.57723.303-2.08824.565

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.